Os05g0545900

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Revision as of 10:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0545900| Description = Conserved hypothetical protein| Version = NM_001062750.2 GI:297604853 GeneID:4339500| Length = 2886 bp| Definition ...")
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Gene Name

Os05g0545900

Description

Conserved hypothetical protein

Version

NM_001062750.2 GI:297604853 GeneID:4339500

Length

2886 bp

Definition

Oryza sativa Japonica Group Os05g0545900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27165031..27167916

Sequence Coding Region

27165031..27165491,27166134..27166254,27166344..27166620,27166769..27166910,27167901..27167916

Expression

GEO Profiles:Os05g0545900

Genome Context

<gbrowseImage1> name=NC_008398:27165031..27167916 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:27165031..27167916 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagaaggcccaccatagaagagaaactggcgacctactccatgttccaggttcgtcagggatccaccgtcccgatcaccgcgcgggaatggctggactctctgccgccgccgccgccgccgtcgccgtcgcaatcgggggccaattcctccaccttcctgccggcggcggcggggtctgcatgcgaggccccggcgaggaagaagaggacgccagggaggtggaggaggatccctcgcacgctaccccatccttgcctgagaaagaggcccatgacatgggaggagcttctcgcggacagcttggacatgagcgataaggctcactgcttcagggaggaggataagcccgctttccgcgagtccaaggcgcagatggccaggttctatcagaggatgatcgacatcgagaagaacaaaatcgaacaaatcttccgaccccgcgtcctctccgatacacctgagcaacatttgaccgcagaagagatggaggcagagctcgctggcaagaaagtttgtccccaagctcatcgcttcgccaatttagcaattaaccattacaacaatattgagaagaacattgttaagattgagctttgtactgttcttttatcaaactgttttcatgaggtctgtgggtccacatacgcccatgtcaactttactgccagggctcagaatgatgatcaggctaagaagagcctgtactttgcagagctcaaattgaatccggatcttctggcaaagaggatggaacgctttgcagagttgagccttgatcctaatattgttggatgtgctgatgatatcgagcccatgtgtgtcgtctctatccacaacctccagggttcttgttttggtggatgccatgagatcaacaggagaattgattatgtaatgacgaggaatcaggactatgagcgttgtcactcatgtagtgaccgtatcaagcatccatatgggacagaatttgttgcagggcatgatagttccaagattccggagcgtattttttaa</cdnaseq>

Protein Sequence

<aaseq>MRRPTIEEKLATYSMFQVRQGSTVPITAREWLDSLPPPPPPSPS QSGANSSTFLPAAAGSACEAPARKKRTPGRWRRIPRTLPHPCLRKRPMTWEELLADSL DMSDKAHCFREEDKPAFRESKAQMARFYQRMIDIEKNKIEQIFRPRVLSDTPEQHLTA EEMEAELAGKKVCPQAHRFANLAINHYNNIEKNIVKIELCTVLLSNCFHEVCGSTYAH VNFTARAQNDDQAKKSLYFAELKLNPDLLAKRMERFAELSLDPNIVGCADDIEPMCVV SIHNLQGSCFGGCHEINRRIDYVMTRNQDYERCHSCSDRIKHPYGTEFVAGHDSSKIP ERIF</aaseq>

Gene Sequence

<dnaseqindica>1..461#1104..1224#1314..1590#1739..1880#2871..2886#atgagaaggcccaccatagaagagaaactggcgacctactccatgttccaggttcgtcagggatccaccgtcccgatcaccgcgcgggaatggctggactctctgccgccgccgccgccgccgtcgccgtcgcaatcgggggccaattcctccaccttcctgccggcggcggcggggtctgcatgcgaggccccggcgaggaagaagaggacgccagggaggtggaggaggatccctcgcacgctaccccatccttgcctgagaaagaggcccatgacatgggaggagcttctcgcggacagcttggacatgagcgataaggctcactgcttcagggaggaggataagcccgctttccgcgagtccaaggcgcagatggccaggttctatcagaggatgatcgacatcgagaagaacaaaatcgaacaaatcttccgaccccgcgtcctctccgatacaccgtatgttaaaccccttcttctttcttcttcttcttcttcttcttcttcttcttcttgttttttttttttgctcatgggtatgtcaactacatcactaagaaaacatcatacaaatagaactttcctttcgtagatcctaacacacgtgaaattgcgcacccattatattcctcagtacaaaattcatgtgaaaaactatcattgtttttttatcacttataaaacagtagtgatcacagcaaacaagacatcgataattcagcttagaatagatctcctaaggacacaaggaagaggtggagacagaaaagccaaagttactttggagatgaatcctgcacgatcctgtaaatgggtaaactgatattagaacctgcaaccattttaattaataagaaatgtggattttttttaagctgcatttccattcttggttactaaaacagttaaattataaaataacttcagttgattcatttagctggtggtcagagatagaacgcattaacaattgaagtcctgtatatgcaacagaaatacagaatgcaatagttgaagtgaaattaaacttttaagtgaatacctaaaattggttttgtccaacacactgttgaatctattactcttttgaatatattgcagtgagcaacatttgaccgcagaagagatggaggcagagctcgctggcaagaaagtttgtccccaagctcatcgcttcgccaatttagcaattaaccattacaacaatattgagaagaacattgtaatagcccttttcctttttttgctttccatgacatgataagtcttaatgttgtaaactactaacctttctattttttgtttgttcaggttaagattgagctttgtactgttcttttatcaaactgttttcatgaggtctgtgggtccacatacgcccatgtcaactttactgccagggctcagaatgatgatcaggctaagaagagcctgtactttgcagagctcaaattgaatccggatcttctggcaaagaggatggaacgctttgcagagttgagccttgatcctaatattgttggatgtgctgatgatatcgagcccatgtgtgtcgtctctatccacaacctccagggttcttgttttggtatgtttattattgtcgaccaattgactgtattctgattaatatgcttgcttatttgtaattactgtaaggttattgatgtttgtacgtgtgattgtaggaccttctcagcgatttatttgatatgttgatgttgctttaattgtaggtggatgccatgagatcaacaggagaattgattatgtaatgacgaggaatcaggactatgagcgttgtcactcatgtagtgaccgtatcaagcatccatatgggacagaatttgttgcagggcatgatagttccaagattccgtattacactgcaggctgatgtaataagagcatattcattgttggtttttagaggggatcctagaggagagagaagtcatagtgctaacggtatacattgtggctatttttctagcagaaggtctcatctaaagaccatgtaattaaactttttgaaataggatagtgctatctatctaatccacgactaaattttccattttcaggttaacattagaagttttgagtattcaattagtataagtataaaatatagtgttgatgcttttgtcaccacaacgatttacaacggtcactggtcggtgcccctccgtccaaaaaaaaaagaccaatcctatagaagacttgtggctaggaattcttttttttttttacagaatagaacggctttgtatagaaggctcgagcttcttttcaaatttggtcaaactttattatatttcttccttagtgtcaaatttagctgtcaacagatagattggaagtacagtgcagcggaaattttgaagtctcgcaatgcaatttctagttcatagagttttcatccttgagtaccctgataattttattcttaggtactcctaaatggcattatatgtcattaatcctatgttcccttttgcgcccagttacccaacaaattaatgattatagggtagaaataatgatgtgatggatgtctctgcttctatatttgtcctttaaaacaacttactaactccgttcaactaaatggtggcaaatgttctattgtttttgctgctggcgggagtatgtttcgcttcatatgagaactggaaattaagaatgaggattgaaattgctggtactgtggtacattgttacctcagattttgacatccctcagcatgctgcctgttgtctgtactatggttgcagtcgcctgaatatatttctccttggagcaccacaagaatgtctgaactctgaacattgcaaagagcttttttttttttttggaatatgcagggagcgtattttttaa</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0545900, RefSeq:Os05g0545900