Os05g0546400

From RiceWiki
Revision as of 10:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0546400| Description = Conserved hypothetical protein| Version = NM_001062752.1 GI:115465234 GeneID:4339502| Length = 918 bp| Definition =...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0546400

Description

Conserved hypothetical protein

Version

NM_001062752.1 GI:115465234 GeneID:4339502

Length

918 bp

Definition

Oryza sativa Japonica Group Os05g0546400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27183225..27184142

Sequence Coding Region

27183283..27183915

Expression

GEO Profiles:Os05g0546400

Genome Context

<gbrowseImage1> name=NC_008398:27183225..27184142 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:27183225..27184142 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgggttcgtcttcgtcttctccaaagctgctgctgctgcttcttcttcccgtcgtcctcctcgctccgctgctcgaagcacggcgtctgcacgtgctgccgccgctgatgttgccgagcgacggcgtggtcgtcggaggcgccgtcgaggtcgagggcggcaggtcgggtaacgccccgccatcgcctcgtccgcatggccgggtgacgccgctcgccgacggcggcggcggcggcgtgctgaggaggccgccaggacgcggtccgccgccacctggtccaggtggccatgtggggccgctctccggcggcgtgtcgtcgtcggccgggagatcgtcgacgaggccgctgatgatctccgacgacgacggcggcgtgtcggggaggcagtggcctgctcccccgccgccgcctgacccgaacaccccggtgcagccgctctccggcggcgacgggcggccgcggcagctcgcgccgccgccgccgatgggaaacccgccgcccaacacccaccgtcgacgcaccgatcgtcctccccgccggctgccggcggacgacgacatggccggtttgctactccgcgtgatccgcgacgccgtcgaatacatggtcggcgaactcggagcctga</cdnaseq>

Protein Sequence

<aaseq>MAGSSSSSPKLLLLLLLPVVLLAPLLEARRLHVLPPLMLPSDGV VVGGAVEVEGGRSGNAPPSPRPHGRVTPLADGGGGGVLRRPPGRGPPPPGPGGHVGPL SGGVSSSAGRSSTRPLMISDDDGGVSGRQWPAPPPPPDPNTPVQPLSGGDGRPRQLAP PPPMGNPPPNTHRRRTDRPPRRLPADDDMAGLLLRVIRDAVEYMVGELGA</aaseq>

Gene Sequence

<dnaseqindica>59..691#tgccgcttgcaacatctcgaattctcgatcgatcgattcattgtttttccttcccgccatggcgggttcgtcttcgtcttctccaaagctgctgctgctgcttcttcttcccgtcgtcctcctcgctccgctgctcgaagcacggcgtctgcacgtgctgccgccgctgatgttgccgagcgacggcgtggtcgtcggaggcgccgtcgaggtcgagggcggcaggtcgggtaacgccccgccatcgcctcgtccgcatggccgggtgacgccgctcgccgacggcggcggcggcggcgtgctgaggaggccgccaggacgcggtccgccgccacctggtccaggtggccatgtggggccgctctccggcggcgtgtcgtcgtcggccgggagatcgtcgacgaggccgctgatgatctccgacgacgacggcggcgtgtcggggaggcagtggcctgctcccccgccgccgcctgacccgaacaccccggtgcagccgctctccggcggcgacgggcggccgcggcagctcgcgccgccgccgccgatgggaaacccgccgcccaacacccaccgtcgacgcaccgatcgtcctccccgccggctgccggcggacgacgacatggccggtttgctactccgcgtgatccgcgacgccgtcgaatacatggtcggcgaactcggagcctgatatccatcgagaccgagaagaagatacgagagatccgagaattatacgtatatttgatttgtacgcatgctgaagaaaggcaagtacttacgtattaattaacgtataccaactgtatagtcgtatactcgtatgtatgtattattgtatttgtattagtatacagtgtacagttgtaagcctagctaagaggctagctgagtaaacgagatcagacagttgcatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0546400, RefSeq:Os05g0546400