Os05g0548100

From RiceWiki
Revision as of 10:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0548100| Description = Conserved hypothetical protein| Version = NM_001062759.1 GI:115465248 GeneID:4339509| Length = 1040 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0548100

Description

Conserved hypothetical protein

Version

NM_001062759.1 GI:115465248 GeneID:4339509

Length

1040 bp

Definition

Oryza sativa Japonica Group Os05g0548100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27278596..27279635

Sequence Coding Region

27278652..27279287

Expression

GEO Profiles:Os05g0548100

Genome Context

<gbrowseImage1> name=NC_008398:27278596..27279635 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:27278596..27279635 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaatggagacgagacgttcgcttcccccaccgccggcggcggcggcggcgagttcgagcagccgctgaccaacggcgggggaggaggagggggcggaggggtgtaccccgccgccaaggcctacgacgcgggcgagttggacgcgctccgcgaggcgaagcgcgacctggaggacaagctcgccgccgtggagcacgagaaccggttcctcggcgcggaggcgtaccgcctcgaggggatcgtgtcgcaggccagggaggacatcgccaccgccgagcacgccatcgccgcctccgagggggaggccgccttgctccgcgacgaggtcaagcgcgtgaaggagctcctcgccgccgagaagtccaaccacgaggccgagcggcgcagggccgcggacctcgacgccgagctgaagggcgtgcagaaggaggtggcggccctcgaggaggagatcaaggccctgaaggcatccgccgccgccgccgatgcagaggatgaggatgaggctgctgctcccgcgacgccatctaaggaagcggaggtaggttatcacgggctgatggcagctgccgccgctggagccgccgccacggccgtcgttgcggtggtcatccttcacctgaagaggtaa</cdnaseq>

Protein Sequence

<aaseq>MENGDETFASPTAGGGGGEFEQPLTNGGGGGGGGGVYPAAKAYD AGELDALREAKRDLEDKLAAVEHENRFLGAEAYRLEGIVSQAREDIATAEHAIAASEG EAALLRDEVKRVKELLAAEKSNHEAERRRAADLDAELKGVQKEVAALEEEIKALKASA AAADAEDEDEAAAPATPSKEAEVGYHGLMAAAAAGAAATAVVAVVILHLKR</aaseq>

Gene Sequence

<dnaseqindica>57..692#gcttttccgaaccctttccattttttccacccacacagcggcggcgagggtttccgatggagaatggagacgagacgttcgcttcccccaccgccggcggcggcggcggcgagttcgagcagccgctgaccaacggcgggggaggaggagggggcggaggggtgtaccccgccgccaaggcctacgacgcgggcgagttggacgcgctccgcgaggcgaagcgcgacctggaggacaagctcgccgccgtggagcacgagaaccggttcctcggcgcggaggcgtaccgcctcgaggggatcgtgtcgcaggccagggaggacatcgccaccgccgagcacgccatcgccgcctccgagggggaggccgccttgctccgcgacgaggtcaagcgcgtgaaggagctcctcgccgccgagaagtccaaccacgaggccgagcggcgcagggccgcggacctcgacgccgagctgaagggcgtgcagaaggaggtggcggccctcgaggaggagatcaaggccctgaaggcatccgccgccgccgccgatgcagaggatgaggatgaggctgctgctcccgcgacgccatctaaggaagcggaggtaggttatcacgggctgatggcagctgccgccgctggagccgccgccacggccgtcgttgcggtggtcatccttcacctgaagaggtaatctggtgctgtgacgcgtaagaagttttggtctgctgctatggcttacatgagattggattacccccttttgccgtggtgctggtattactggaggtaatattactttagcattccactcgctagcatttagagtcctagagaggtggagacttatcgtgagtccgtttcggttctgcatcctcacatggtaataagaatgtcaagacaattctgagtgagacgcatgtggttgtgttatgttatgttattttggtgctgtactgatttttaattctgtcccatggattcttgcattgctctgctgtttgtgtgtgaaattactacgattgcagaattaatgacctac</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0548100, RefSeq:Os05g0548100