Os11g0629300

From RiceWiki
Revision as of 21:22, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0629300

Description

Similar to RING-H2 finger protein RHB1a

Version

NM_001074845.1 GI:115486338 GeneID:4350962

Length

3629 bp

Definition

Oryza sativa Japonica Group Os11g0629300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:26490675..26494303

Sequence Coding Region

26491407..26491526,26492059..26492464,26492813..26492922,26493817..26493843

Expression

GEO Profiles:Os11g0629300

Genome Context

<gbrowseImage1> name=NC_008404:26490675..26494303 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:26490675..26494303 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggagctctttgttcatgtttgcaagctgattattccgaccaccatgggcatcatgcttcaccggcattagggggatgcatgtgcctcagatgttttactcagcagctcatcaatgcgtacactgttttattccgagctgggacagtgcacgcagtttctcagtctatagaagccactcctgttgattcatctgaaagttcatttgacacatatcgttcacccccaagaccacttccatatgatgatcctagattctcccctcctcagcgtgattggttagtgtcaaggcatggaccttcatgccattccccagaggaatcagaaccactgagggcaaatgatgacgaggaaatggaaacaccaagttcaacacataagtcaagtaaaacaaactatgacacaaaaatgaaaagaagcagctctactcatggagagaagctgccaacaaaggaacctggaaattatttcacatacttttccccatccgctgaagatgaagatgtctgcccaacttgtcttgaagattatacttctgagaatcctaggatagtaatgcagtgctcacatcatttccaccttggctgtatttatgagtggatggaaagaagtgaagcatgccctgtttgtggaaagaaaatggagtttgacgagacaacataa</cdnaseq>

Protein Sequence

<aaseq>MGALCSCLQADYSDHHGHHASPALGGCMCLRCFTQQLINAYTVL FRAGTVHAVSQSIEATPVDSSESSFDTYRSPPRPLPYDDPRFSPPQRDWLVSRHGPSC HSPEESEPLRANDDEEMETPSSTHKSSKTNYDTKMKRSSSTHGEKLPTKEPGNYFTYF SPSAEDEDVCPTCLEDYTSENPRIVMQCSHHFHLGCIYEWMERSEACPVCGKKMEFDE TT</aaseq>

Gene Sequence

<dnaseqindica>733..852#1385..1790#2139..2248#3143..3169#ggagagagagagagaagaagctcaacccaatcccctcctctcccccaattccgccgccgccccctgctcggatcctcccccacccccgccgccggcgagaagggcccgtaggcgcgggctcgtctccttgctgatcccgactccgcgcgcacggccggtgactcgactgcctcgtctcggttcgaatcgagctgggaggtattgctcgttcgattgattgagccgggttcgcctctagattgtaaatctatcgccccatcgggagtttgggatcgattctttcgttcgttctttctttctttctttctcccccctccattagccaatccatgatttattttttattttttaatttttatctgggtttcttctattcgatgcgtggtggagtgctcatagaagcttttcttttctaaaaaaagagagagaaaaaattttgagttgagctgagagcctgggtctaccaccatgcctttgcgttaggtccacacctgaagctggaatatacgatggattgatcgaactttgtagtactatttgtgtttggtggatgcgtttgttcgacgattactgacctgattttgctgcaactgacagatattgaggagcacttggactgaagaactcaattttggagcacttggattagcattggccaccctgctggactcactgactgttaaaacggctctggtttaaggagttgtttctcttgtggtcattctttggattatgggagctctttgttcatgtttgcaagctgattattccgaccaccatgggcatcatgcttcaccggcattagggggatgcatgtgcctcagatgttttactcagcagctcatcaatgcggtatgtcttgtcctagtatcttgattctttccattttttctgtatgttgttctgctcaccgtgagcttattaactgttcttacttaaaattattaagctgcaagtagataacatgttagccatctctttgaagacacaccaaatgatatgtcttccacaacatatttcgagaaaaaaaccacaacatatttcgagaaaaaaacaatgagcatatacaatcatgtatgggtgaatagttgagaagttatctaggttatactgaagctcatcagttttccttattcaagttctaaacaagactgattgtggtgtgctcaggaaaagcgaaatacccaatgtgaattatctgccagtatagatataattgtctcgagtgtcaatccgttgtcataagttttcaagtgataaacaagagaagggtgttcaattgaactaaaaatgctctgatttttattggacagcttacttctttttaaattgagctaacacaggttggaaatcattgacattttgatttcttttctttttccagtacactgttttattccgagctgggacagtgcacgcagtttctcagtctatagaagccactcctgttgattcatctgaaagttcatttgacacatatcgttcacccccaagaccacttccatatgatgatcctagattctcccctcctcagcgtgattggttagtgtcaaggcatggaccttcatgccattccccagaggaatcagaaccactgagggcaaatgatgacgaggaaatggaaacaccaagttcaacacataagtcaagtaaaacaaactatgacacaaaaatgaaaagaagcagctctactcatggagagaagctgccaacaaaggaacctggaaattatttcacatacttttccccatccgctgaagatgaagatgtctgcccaacttgtcttgaaggtattaatctacttgtcatcagtatactagaatgacatatgtagttaatattacatatgcaattgtcttcatagaatacttaatgagagtcatgtgtactgaccatgaatgacgtctggactgatgaatttgctagtatcaaactaatttgttctgtgcactgattgtataattgttactagtagttgataaattgatactacagagtcaaaattgttcctgaatttacggtcatgggtttcattcaggttgattgaaaaaaaaaactgacatcaaatctgttgttagcaccatgaacaatttatctgcctaagattttgtactaattcttacattatatctatgcagattatacttctgagaatcctaggatagtaatgcagtgctcacatcatttccaccttggctgtatttatgagtggatggaaagaagtgaagcatgccctgtttgtggaaaggtaattttgctttagctcttccttttttttcctccttataatttttgtccagttatatgctttgttgactatgtttgctttttctaggtactacgtacaactttttaatgcagcatgcatttatttaaggatacctgagataattgcattgtacaattgatggtcatttgcaccctagttttaagttttaacttcataaatgcgacataagaatttgaataaccctgtaatatattaccattaacctatatttgatattgtaaggaggacatggtttataagattagaattgaaagctccaccttgaaagcagccagcttctgatgaatattatatgcgataacttgcccatctatctcgtagatttttttcagaagatcttttttttggcacccttaacctagctttgaggtttgtggaccatgcgttggttagtccaccaaatacttgttttgtggactaaccaatgcatggtttaggctgattactgcagtatccactttgccttacataaggatatggtgactgtaaagccccttaaggtaggaggataggtgacttatcacatagataataatttagcttggaaagggaatcacatctactttggaccgacaaatataagaaatgaattgttttgggggaagaacacttacctaattgagatgctgactatttgaattaaagaaaaagtaaagcagttttggcagtattaaccttaaataaaaatgtgtgaagctgaccttttttaactcagtttttatgcagtggtaacctccaactgatgtatctttatagctgacagctgtcggaatctattttgtttctcctttccaaacgatgttttccttctaactcttgattgatgttttgctttcttctaatcctccgcagaaaatggagtttgacgagacaacataattgtcagactggcctgtatttcttggattaacaaccctcatggcaatctgaaagtacaggtggtctaggccaccaaatactctgtacatacaccttgtaagtattgaatcagtagtgtgatcctcatcgcctctgatattcttgaaatgttggaagggcgcacaaaaacattcttttctatttctttgaaatagtcagtaggggaagtttgcttccccatggtttctttgtgtgcctgcgttgctatgtctcggaggcgcctttgattgtccggtgatagtgccacctgaaaaagctgtaaattgatgatggcctgtgttgatataatcatatgaagttcgatgattatggggaatcctcttttctcgcaacgcttgtttggcaccgtgatcatgtttcatgctattaaaattgtaccgggctttcatctctgacaatagcatgccgtatttccagctcc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0629300, RefSeq:Os11g0629300