Os05g0548800

From RiceWiki
Revision as of 10:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0548800| Description = Acid phosphatase/vanadium-dependent haloperoxidase related family protein| Version = NM_001062765.1 GI:115465260 Gene...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0548800

Description

Acid phosphatase/vanadium-dependent haloperoxidase related family protein

Version

NM_001062765.1 GI:115465260 GeneID:4339515

Length

1271 bp

Definition

Oryza sativa Japonica Group Os05g0548800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27305098..27306368

Sequence Coding Region

27305160..27305219,27305620..27305715,27305807..27305878

Expression

GEO Profiles:Os05g0548800

Genome Context

<gbrowseImage1> name=NC_008398:27305098..27306368 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:27305098..27306368 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gattatattttcttcttacaggtaatgtatgatgcatcaggaattcgattccacacaggtcgccaagctgctttgctaaatcaaatagtctctgatttcccaccagaacatccaattatctcatccttcagaccgctacaggaacctcttggacacagtccatttcaggtttttgctggagcgcttgttggttgttcaatagcctatttgatgggaaaatctgtataa</cdnaseq>

Protein Sequence

<aaseq>DYIFFLQVMYDASGIRFHTGRQAALLNQIVSDFPPEHPIISSFR PLQEPLGHSPFQVFAGALVGCSIAYLMGKSV</aaseq>

Gene Sequence

<dnaseqindica>1150..1209#654..749#491..562#catttcaattttagcacaagcgaaagtcgcaatcctgaagtgtccttttgttaggactatagacattggcaactagattcttgtgataaataacagtaggtttcactgccctttatatgctatgttgctttggaataatagggttttaaataccagttaaataatcttttgagtgcttcttccttgggggtgggtgtggaattttcctgtcaagacacctagctgaaagaaccatctgtttaatattcatatttgaagtttttgataccaaaatatcaaaattttaagagctgctgcatttgcaagatctgtacttgttagtgtactttaaatggtccttttttaatagctacaactatgctggaactctgaatatctcccttacaaattaagttcttttttttcctcaaacacattttttttctttttcaaaatgatagctataggtacattcatacacatgttagttcttcttagagaaggtttctaagattatattttcttcttacaggtaatgtatgatgcatcaggaattcgattccacacaggtcgccaagctgctgtaagtttgtgggtttctgtgcttatgaggaacagggtcttctatactattaatttatatcctctgattatatctgcaaacttttgtgcagttgctaaatcaaatagtctctgatttcccaccagaacatccaattatctcatccttcagaccgctacaggaacctcttggacacagtccatttcaggtaactctaccatgtctgttctattctgttggtgcagtaaagatactagatgcccttgagttattcacatcatgaaaaacaaagtttagactgcaatctggatatattcttgaacttcctttaagtcatatgatacatttgaattctatggtattcctttaagccatagttccttccagcttcctcaactatttggtcacatgtccacattgcatgagctactgtggaatatttcttgctgacataaaaaactatgactttcacttggttggtccattgcattttttttagttctgtgtgtatgacgatttttaatagttacatattcctggtatctgctcatgttgttcatatactactatgtttgttgatcttaatgttgttcttttggttggtgtaggtttttgctggagcgcttgttggttgttcaatagcctatttgatgggaaaatctgtataagatagttacaatttgtcttttacacaaatactgttatgttaatataaggaaccatttctgcg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0548800, RefSeq:Os05g0548800