Os05g0548900

From RiceWiki
Revision as of 10:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0548900| Description = Similar to Phosphoethanolamine methyltransferase| Version = NM_001062766.2 GI:297604861 GeneID:4339516| Length = 140...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0548900

Description

Similar to Phosphoethanolamine methyltransferase

Version

NM_001062766.2 GI:297604861 GeneID:4339516

Length

1405 bp

Definition

Oryza sativa Japonica Group Os05g0548900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27309655..27311059

Sequence Coding Region

27309937..27310032,27310123..27310197,27310322..27310375,27310479..27310640,27310818..27311057

Expression

GEO Profiles:Os05g0548900

Genome Context

<gbrowseImage1> name=NC_008398:27309655..27311059 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:27309655..27311059 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ggacagaaagtgcttgatgttgggtgcggaattggaggcggcgacttctatatggctgaaaactacgatgcccatgttcttggtattgatctttcaatcaacatggtttcatttgcaatcgaacgtgccattggacgcaagtgttcggttgagtttgaagtagctgattgcaccacaaagacctacgcaccaaatacatttgatgtgatctacagccgtgacaccattcttcacatacatgataaacctgctttgttcagaagtttcttcaagtggctgaaacctgggggcaaagtcctcatcagtgattactgtaggaatcctgggaaaccatcagaagaatttgctgcttacattaagcagagaggctatgacctccacgatgtgaagacttacggaaagatgcttgaggatgctggtttccatcatgtcattgctgaagaccgcacggaccagttcctgcgtgttcttcaaagggagcttgctgaagttgagaagaacaaagaagccttcatggcagacttcacccaggaggactacgatgacattgtgaacggctggaacgcgaagctgaagcggagctctgccggtgagcagaggtgggggctgttcattgcaaccaaatga</cdnaseq>

Protein Sequence

<aaseq>GQKVLDVGCGIGGGDFYMAENYDAHVLGIDLSINMVSFAIERAI GRKCSVEFEVADCTTKTYAPNTFDVIYSRDTILHIHDKPALFRSFFKWLKPGGKVLIS DYCRNPGKPSEEFAAYIKQRGYDLHDVKTYGKMLEDAGFHHVIAEDRTDQFLRVLQRE LAEVEKNKEAFMADFTQEDYDDIVNGWNAKLKRSSAGEQRWGLFIATK</aaseq>

Gene Sequence

<dnaseqindica>1028..1123#863..937#685..738#420..581#3..242#ctggacagaaagtgcttgatgttgggtgcggaattggaggcggcgacttctatatggctgaaaactacgatgcccatgttcttggtattgatctttcaatcaacatggtttcatttgcaatcgaacgtgccattggacgcaagtgttcggttgagtttgaagtagctgattgcaccacaaagacctacgcaccaaatacatttgatgtgatctacagccgtgacaccattcttcacatacatgtatgtttcacttcagagaatttacagatgtttctacaagtatcctacttaacacaattatactacgaacagctgttcgccagcatagctgatcacgggatacttacctattacaactttgtagttgagttaaccacagaagcaacagtcttacgattgctatacatggttttacaggataaacctgctttgttcagaagtttcttcaagtggctgaaacctgggggcaaagtcctcatcagtgattactgtaggaatcctgggaaaccatcagaagaatttgctgcttacattaagcagagaggctatgacctccacgatgtgaagacttacggaaaggtttgcttctgcagtgacattaacatatcaatcaatctaacttgttaggtagatttgaacaaaaagaggtgaaccactctgacttctgtttgcacaacactagatgcttgaggatgctggtttccatcatgtcattgctgaagaccgcacggaccaggttatcaccctacctctctgaattccgctcactgttgtgcacctccaaatccatttttttctacgacgcttggacaaatgcgattcgttcgagactaatcactgccacatgctatatgtttcagttcctgcgtgttcttcaaagggagcttgctgaagttgagaagaacaaagaagccttcatggcagacttcacccaggttcgtgcttcccagctctgacgcctgcttatgcttttccatgactccaagtgagcattctctcaattgtcctcccatgtatattatcaggaggactacgatgacattgtgaacggctggaacgcgaagctgaagcggagctctgccggtgagcagaggtgggggctgttcattgcaaccaaatgattcagaagcagagagggttcagaataaaacgggtgctgctgttgttggctgtgttaactagtactcctactagatctgttgttgcagatttatttgtgcgccccaattggtagtttgtttgtgtgtgatgtagtattccagttttagaggacggccaatgttccatgtgacgtgatgtacgttaaactcagtctgtttaaagtatgtattatcgtgcgtatttggtatggaactgtgttattgtttgcagataaataaacacagatgtgttcctcttttgca</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0548900, RefSeq:Os05g0548900