Os05g0549700

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Revision as of 10:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0549700| Description = Similar to Threonine synthase, chloroplast precursor (EC 4.2.3.1) (TS)| Version = NM_001062771.1 GI:115465272 GeneID:...")
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Gene Name

Os05g0549700

Description

Similar to Threonine synthase, chloroplast precursor (EC 4.2.3.1) (TS)

Version

NM_001062771.1 GI:115465272 GeneID:4339521

Length

1937 bp

Definition

Oryza sativa Japonica Group Os05g0549700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27372139..27374075

Sequence Coding Region

27372237..27373802

Expression

GEO Profiles:Os05g0549700

Genome Context

<gbrowseImage1> name=NC_008398:27372139..27374075 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:27372139..27374075 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccaccacccacgccgcctccctctccttcctcctctctcacccccaccccacctcccccaaccctaaccctaaccctaacctccccctccgccgcgccccccaccgcgtccgctgcgccaccgacgccgccgccaccaggcaccggcgcgcggccgacgagaacatccgggaggaggcggcgaggcaccgcgccccgaaccacaacttctccgcgtggtacgcgcccttcccgcccgcccccaacggcgaccccgacgagcgctactccctggacgagatcgtctaccgctccagctcgggcggcctcctcgacgtgcgccacgacatggacgcgctcgcccgcttcccgggctcctactggcgcgacctcttcgactcccgcgtcggccgcaccacctggcccttcggctccggcgtctggtccaagaaggagttcgtcctccccgagatcgaccccgaccacatcgtctccctcttcgagggcaactccaacctcttctgggcggagcgcctcggccgcgaccacctcgccgggatgaacgacctctgggtcaagcactgcggcatctcccacaccggatcgttcaaggatctcggcatgacggtgctcgtcagccaggtgaaccgcctccgccgcgcgccgctctcccgccccatcgccggagtcgggtgcgcctccacgggggacacctccgccgcgctctcggcctactgcgccgccgcggggatcccggccattgtgttcctccccgccaaccgcatctcgctcgagcagctcatccagcccattgccaatggcgccaccgtgctctcgctcgacacggacttcgacggctgcatgcggctcatcagggaggtgactgccgagctgccgatttaccttgcgaattcattgaattcccttcggctcgaggggcagaagactgctgctattgagattcttcagcagttcgattgggaggtgccggattgggtcattgttcccggaggcaatcttgggaacatatatgccttctacaagggattcgagatgtgccgcgtccttgggctcgtcgatcgtgtgccgcggcttgtctgcgcgcaggctgccaatgcgaacccgctgtaccggtactacaagtcggggtggactgagttcacgccgcaggtggctgagccgacatttgcatcggcaattcagattggtgacccggtatctgtcgatcgcgcggtggttgcgctcaaggcaactgatggcatcgtcgaggaggccacggaggaggaactcatgaacgcaatgtcgctcgctgatcgcactggcatgtttgcttgcccgcatactggggttgccctcgcagcactgttcaagctccgtgaccagcgcatcatcgggccaaatgaccgcacggtagtcgtcagcacagctcatggtctgaagttctcacagtccaagatcgactaccatgacagcaagatcgaagacatggcctgcaagtatgcgaatcccccggtcagcgtgaaggctgacttcggtgccgtcatggatgtcctcaagaagaggctcaagggtaagctctga</cdnaseq>

Protein Sequence

<aaseq>MAATTHAASLSFLLSHPHPTSPNPNPNPNLPLRRAPHRVRCATD AAATRHRRAADENIREEAARHRAPNHNFSAWYAPFPPAPNGDPDERYSLDEIVYRSSS GGLLDVRHDMDALARFPGSYWRDLFDSRVGRTTWPFGSGVWSKKEFVLPEIDPDHIVS LFEGNSNLFWAERLGRDHLAGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRRAPL SRPIAGVGCASTGDTSAALSAYCAAAGIPAIVFLPANRISLEQLIQPIANGATVLSLD TDFDGCMRLIREVTAELPIYLANSLNSLRLEGQKTAAIEILQQFDWEVPDWVIVPGGN LGNIYAFYKGFEMCRVLGLVDRVPRLVCAQAANANPLYRYYKSGWTEFTPQVAEPTFA SAIQIGDPVSVDRAVVALKATDGIVEEATEEELMNAMSLADRTGMFACPHTGVALAAL FKLRDQRIIGPNDRTVVVSTAHGLKFSQSKIDYHDSKIEDMACKYANPPVSVKADFGA VMDVLKKRLKGKL</aaseq>

Gene Sequence

<dnaseqindica>99..1664#accacctcactcactccctaaaaccctcctccctcccccatcatctccctcctcccactcgccgccgccgccgccaactttccccaccaccaccacccatggcggccaccacccacgccgcctccctctccttcctcctctctcacccccaccccacctcccccaaccctaaccctaaccctaacctccccctccgccgcgccccccaccgcgtccgctgcgccaccgacgccgccgccaccaggcaccggcgcgcggccgacgagaacatccgggaggaggcggcgaggcaccgcgccccgaaccacaacttctccgcgtggtacgcgcccttcccgcccgcccccaacggcgaccccgacgagcgctactccctggacgagatcgtctaccgctccagctcgggcggcctcctcgacgtgcgccacgacatggacgcgctcgcccgcttcccgggctcctactggcgcgacctcttcgactcccgcgtcggccgcaccacctggcccttcggctccggcgtctggtccaagaaggagttcgtcctccccgagatcgaccccgaccacatcgtctccctcttcgagggcaactccaacctcttctgggcggagcgcctcggccgcgaccacctcgccgggatgaacgacctctgggtcaagcactgcggcatctcccacaccggatcgttcaaggatctcggcatgacggtgctcgtcagccaggtgaaccgcctccgccgcgcgccgctctcccgccccatcgccggagtcgggtgcgcctccacgggggacacctccgccgcgctctcggcctactgcgccgccgcggggatcccggccattgtgttcctccccgccaaccgcatctcgctcgagcagctcatccagcccattgccaatggcgccaccgtgctctcgctcgacacggacttcgacggctgcatgcggctcatcagggaggtgactgccgagctgccgatttaccttgcgaattcattgaattcccttcggctcgaggggcagaagactgctgctattgagattcttcagcagttcgattgggaggtgccggattgggtcattgttcccggaggcaatcttgggaacatatatgccttctacaagggattcgagatgtgccgcgtccttgggctcgtcgatcgtgtgccgcggcttgtctgcgcgcaggctgccaatgcgaacccgctgtaccggtactacaagtcggggtggactgagttcacgccgcaggtggctgagccgacatttgcatcggcaattcagattggtgacccggtatctgtcgatcgcgcggtggttgcgctcaaggcaactgatggcatcgtcgaggaggccacggaggaggaactcatgaacgcaatgtcgctcgctgatcgcactggcatgtttgcttgcccgcatactggggttgccctcgcagcactgttcaagctccgtgaccagcgcatcatcgggccaaatgaccgcacggtagtcgtcagcacagctcatggtctgaagttctcacagtccaagatcgactaccatgacagcaagatcgaagacatggcctgcaagtatgcgaatcccccggtcagcgtgaaggctgacttcggtgccgtcatggatgtcctcaagaagaggctcaagggtaagctctgaagtgtgtttggctaactcccctccaatcaattgctgtatgtcagttgtcttctgcatcaaattcgaatgcggcgggtgactgtggagcgatgattcgtcgatttgtagtagtattgtaggtccctgaaccttgaagatcgtccatgcttgagagtaaagattgagaggctatctcttgtacctgttctgtgttgtgtgtgggtgggtaataagcgactaccttgttgtttgaaactctgaataatcagatcatctagtccaattactccgttc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0549700, RefSeq:Os05g0549700