Os11g0667400

From RiceWiki
Revision as of 21:23, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0667400

Description

Similar to Ubiquitin carboxyl-terminal hydrolase 11 (EC 3.1.2.15) (Ubiquitin thiolesterase 11) (Ubiquitin-specific processing protease 11) (Deubiquitinating enzyme 11)

Version

NM_001189773.1 GI:297728676 GeneID:9271724

Length

2146 bp

Definition

Oryza sativa Japonica Group Os11g0667400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:28773673..28775818

Sequence Coding Region

28773673..28773682,28775147..28775295,28775530..28775619,28775708..28775818

Expression

GEO Profiles:Os11g0667400

Genome Context

<gbrowseImage1> name=NC_008404:28773673..28775818 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:28773673..28775818 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcccttagtaggacaatatgacacctcaatgctgaaaagtctatctgagattcataagcttgagcttatcccgaaaggaaatgaagattatgtcgcactacatggttatctggaagcctttctaaaagtggaacagttagacccagaagacaatgtggtactgcccatgctgcaaaaagcatcaacaagcgatgaagaaattagatctgtggaggctaccggaagttctggtcattcatctcaaaagcatgaagaagggaagggatggtacaagtttgatgatgagtgcgtgagacctataactgaagacagtataaagacacctgctgcttatgtgctgttctacacacgagaatga</cdnaseq>

Protein Sequence

<aaseq>MPLVGQYDTSMLKSLSEIHKLELIPKGNEDYVALHGYLEAFLKV EQLDPEDNVVLPMLQKASTSDEEIRSVEATGSSGHSSQKHEEGKGWYKFDDECVRPIT EDSIKTPAAYVLFYTRE</aaseq>

Gene Sequence

<dnaseqindica>1..10#1475..1623#1858..1947#2036..2146#atgcccttaggtaagcccgccgcacttcttttccccatgatcttagggttagggtttcatgatttggggaaattttgggggcttactgtagctagggtttcggttctttggggatttgtctgagatttccatgaacttttgcttccccttcttctaatttcttcaagccgaaaccctagaaggcctaattccatttcttatgcttcgggattgcatgatttgggcttaactcaactttaacagagggatttgggcatgaacacgaagaacaatttgaacatgaacacttattgagttccaatttgaggccaacccggtgctctgataccattgttggatatgctttggatcggtttggcacaaagtgaaactacaaattgaaatgggattgagtcataccttgatctccaggggttcccatttctctgtctttattcttctctcgttctctcttgttttgaagcacagagagagatgtgtttcggttcttccctgtgttctcagtgggtttcggttgatcgggtagcaattgagtcttagggtttgcacttaggtattgatttctttttatacccactgcacacagggggaaccgacactgggtatggcggttatcccccgatcagggatgttcatgagagatcgatcactgtagcgatcgccctaaacaaaatatctctttgccgactttaggtttagccgcaagatcatattttgtgttcacactaacaattatttctttttctcatcttttcgccttaggtccgtcaaaacgcatatcgcccgcgcccctgcacccccgacgcaggcaccgcttcggtcatcgcaggcggcggcgcggcgaaaatcgctgtcggctccggatcaggatcgccggcggacctcctcctccggcccccacctccgccgccactccgccctcctatctactccaccggcggcttgccgacccgaagcccccccatccccccagcccccgacgcaggcaccgcatcagtcatcgaatgcggcggcgcggccggcggcgctgccagcatcaggtctgacgcaaaagctcccgactcgcaggcaccgcatcaccgcatctggttgttgtattctctgatttagccttaaccttgtgctatggtgctgtgtgtatgcatggttaaattcttctcgataagcctgaagtatgtagtgttccttttggatattatgtataaacgacatatcttatatttggtgcttgtaccgtaggtgaggtctgtcataatatgcagctattgctttcactgagagcgcacatgctagtaaactagtattttagatgcaaatattagtgctataagaaatatttttgctagtttttcagttgttacttaattatgaacacatgtactttagatccagaccactttatgaatcagcacatttggtgcaaaccatttttattatcgactacttatcaatgtccattggctacaaaatgcagtaggacaatatgacacctcaatgctgaaaagtctatctgagattcataagcttgagcttatcccgaaaggaaatgaagattatgtcgcactacatggttatctggaagcctttctaaaagtggaacagttagacccagaagacaatgtggtgagtgccccttaggaacagctgttatgctcttggcttcactgcttattgaatagccttctttgcaatcttcatttcttttgttaaccaaaataggttgatgtgcgtatgtatgatgtggaaacattaccttcgcaaaatatcaccacaatacgtggcttgctttggattctgaattggaagttactgttgttgcataactgatgaccacttttttctctgctttgcattcaggtactgcccatgctgcaaaaagcatcaacaagcgatgaagaaattagatctgtggaggctaccggaagttctggtcattcatctcaaaaggttctcgtacacccaattcacaagaaataagcttgagactatctttttcaatgtcttgataatgagcaaggctggttggtttctgcagcatgaagaagggaagggatggtacaagtttgatgatgagtgcgtgagacctataactgaagacagtataaagacacctgctgcttatgtgctgttctacacacgagaatga</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0667400, RefSeq:Os11g0667400