Os05g0551000
| Gene Name |
Os05g0551000 |
|---|---|
| Description |
Zinc finger, CHY-type domain containing protein |
| Version |
NM_001062780.1 GI:115465290 GeneID:4339530 |
| Length |
4628 bp |
| Definition |
Oryza sativa Japonica Group Os05g0551000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:27459120..27463747 |
| Sequence Coding Region |
27459287..27459328,27459429..27459597,27459705..27460895,27461552..27461723,27461839..27462060 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:27459120..27463747 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:27459120..27463747 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggagaaaatcgagaggcacttcaaaaatgaggaaacaaaggtacttcctcaagctaggattcatttttcatcagagaaacaaagggaacttttatataagagtctctgtgtcataccgttgaagttattggagcgtgttttaccgtggtttgtatcgaagctgaatgatcaggatgcagaagcttttcttcagaatatgtttttggcagcaccttcctctgaagctgcattggtcactcttctctctggttgggcatgcaaaggtcgctcaaagggcacctctaactctggaaaattcatatgcttgacaccaagggcactgagcagcccattggatgaaaatgggtttaaagactgccagttatgtccatgttctttacaatcagatatttgttctaggccagccaagaaatggaatgacacagaatctagtaacataagcaactgctcacaaacggctgatatagcattgacatgtaaaaacagaccttgtcacattcctgggttaagggtagaaattagcaatcttgctgtcaattcgtttgcttctgcagagtccttccgatcgctgtctctcaattattctgctccttcattgtattcaagtcttttttcatgggagacagatgcagccttttctggcccagataacatttcaaggccaattgacacaatattcaaatttcataaggcaattcgcaaagatttggagttcttagatgtggaatctagaaagctcatagatggggatgaatcttcccttcgccaattcatcggaaggtttcgtttactgtggggtctttatagagcacacagcaatgctgaagatgaaattgtatttcctgctcttgaatcgaaagagacactgcacaatgtcagccactcatatactcttgaccacaagcaggaagaagaattatttaaagatatatccactattctttttgagctttcacaattgcatgctgatttgaagcatcctcttggtggtgctgatgcagttggagcgaaccacattcatccatataataggatcgattggtccaaaaagaataatgaacttttgacaaagcttcaaggaatgtgcaagtctatccgggttactctgtctaatcatgtccatagagaagaacttgaattgtggccactatttgataaacatttttctgtagaggagcaggataagattgtaggccgtataattggaagtacaggagctgaggttctgcagtcaatgttaccctgggttacatcagcgcttagtctagatgaacagaacaatatgctggacacatggaggcaagtaactaagaatacaatgtttgatgaatggctaaatgaatggtggaagagatcacctacttcttctggcccttcaagcgatgcctcccatccagaagaagatcatttccaggaaaagttcgatcagagtgaacagatgtttaagcctggttggaaggacatcttccgaatgaaccagagtgagcttgaggctgagatacgaaaggtttctcgtgattctactcttgacccaaggaggaaggcttatctaatccaaaatctcatgaccagccgctggatagctgctcagcagaaatcgccccaacctcagtcagaagatcgcaatggatgtacagtattacctggatgttgtccttcataccgagatccagagaatcagatttttggctgtgagcattacaaaaggaaatgcaaacttgttgctgcatgctgcaataaactgttcacatgcaggttttgtcatgataaagttagtgaccatacaatggaaaggaaagcaacggtggaaatgatgtgcatgcaatgcctgaaagttcaaccagttggtccaaattgccagaccccttcttgcaatgggctatccatggcaaagtattattgcagcgtatgcaagttttttgacgatgaaaggagtgtgtaccattgccccttttgcaatttgtgtcgtcttgggcaaggattgggtattgattttttccattgcatgaagtgcaactgttgcctgggcatgaaattgatagagcataaatgtcgagaaaagatgctagagatgaattgcccaatctgctgcgacttcctatttacatcgagtgcagcagttaaaggtctaccttgtggccatttcatgcattcagcttgctttcaggcgtacacctgtagtcactacacctgcccaatctgctctaaatccttgggagatatgacagtatactttggcatgcttgatggcttgctggccgcagaagagcttcctgaggaataccgggaccggtgccaggatatactttgtaacgattgtgaaagaaaaggaaggtctcggttccattggctgtatcacaaatgcggcttctgcggttcatataacactagagttatcaagattgatagagctgattgttcaacatcagattaa</cdnaseq> |
| Protein Sequence |
<aaseq>MEKIERHFKNEETKVLPQARIHFSSEKQRELLYKSLCVIPLKLL ERVLPWFVSKLNDQDAEAFLQNMFLAAPSSEAALVTLLSGWACKGRSKGTSNSGKFIC LTPRALSSPLDENGFKDCQLCPCSLQSDICSRPAKKWNDTESSNISNCSQTADIALTC KNRPCHIPGLRVEISNLAVNSFASAESFRSLSLNYSAPSLYSSLFSWETDAAFSGPDN ISRPIDTIFKFHKAIRKDLEFLDVESRKLIDGDESSLRQFIGRFRLLWGLYRAHSNAE DEIVFPALESKETLHNVSHSYTLDHKQEEELFKDISTILFELSQLHADLKHPLGGADA VGANHIHPYNRIDWSKKNNELLTKLQGMCKSIRVTLSNHVHREELELWPLFDKHFSVE EQDKIVGRIIGSTGAEVLQSMLPWVTSALSLDEQNNMLDTWRQVTKNTMFDEWLNEWW KRSPTSSGPSSDASHPEEDHFQEKFDQSEQMFKPGWKDIFRMNQSELEAEIRKVSRDS TLDPRRKAYLIQNLMTSRWIAAQQKSPQPQSEDRNGCTVLPGCCPSYRDPENQIFGCE HYKRKCKLVAACCNKLFTCRFCHDKVSDHTMERKATVEMMCMQCLKVQPVGPNCQTPS CNGLSMAKYYCSVCKFFDDERSVYHCPFCNLCRLGQGLGIDFFHCMKCNCCLGMKLIE HKCREKMLEMNCPICCDFLFTSSAAVKGLPCGHFMHSACFQAYTCSHYTCPICSKSLG DMTVYFGMLDGLLAAEELPEEYRDRCQDILCNDCERKGRSRFHWLYHKCGFCGSYNTR VIKIDRADCSTSD</aaseq> |
| Gene Sequence |
<dnaseqindica>168..209#310..478#586..1776#2433..2604#2720..2941#3463..3600#3709..3943#4036..4095#4257..4328#4406..4540#ttatatttccagcagtcaacgatcaagtgtcctttgagcaggagcacgctgaagaagaacggcggtttaataaatttagatgtttaattgaacaaatccaaataacaggagccagatcaacagcagtggatttttactctgagctatgttcacaagctgatcagataatggagaaaatcgagaggcacttcaaaaatgaggaaacaaaggttagtattttagacataaactctgtagttaaggaggaatgttgtctacttgggtcacgtgaccaatgtagtctaacatgtaattcatctaaatatccaggtacttcctcaagctaggattcatttttcatcagagaaacaaagggaacttttatataagagtctctgtgtcataccgttgaagttattggagcgtgttttaccgtggtttgtatcgaagctgaatgatcaggatgcagaagcttttcttcagaatatgtttttggcaggttattttccaagtttactattttcttctttaaaacaccagttttttttttccaaaaaaaaaaaattctcaacattttactgtttactaatatgttgaactgaacagcaccttcctctgaagctgcattggtcactcttctctctggttgggcatgcaaaggtcgctcaaagggcacctctaactctggaaaattcatatgcttgacaccaagggcactgagcagcccattggatgaaaatgggtttaaagactgccagttatgtccatgttctttacaatcagatatttgttctaggccagccaagaaatggaatgacacagaatctagtaacataagcaactgctcacaaacggctgatatagcattgacatgtaaaaacagaccttgtcacattcctgggttaagggtagaaattagcaatcttgctgtcaattcgtttgcttctgcagagtccttccgatcgctgtctctcaattattctgctccttcattgtattcaagtcttttttcatgggagacagatgcagccttttctggcccagataacatttcaaggccaattgacacaatattcaaatttcataaggcaattcgcaaagatttggagttcttagatgtggaatctagaaagctcatagatggggatgaatcttcccttcgccaattcatcggaaggtttcgtttactgtggggtctttatagagcacacagcaatgctgaagatgaaattgtatttcctgctcttgaatcgaaagagacactgcacaatgtcagccactcatatactcttgaccacaagcaggaagaagaattatttaaagatatatccactattctttttgagctttcacaattgcatgctgatttgaagcatcctcttggtggtgctgatgcagttggagcgaaccacattcatccatataataggatcgattggtccaaaaagaataatgaacttttgacaaagcttcaaggaatgtgcaagtctatccgggttactctgtctaatcatgtccatagagaagaacttgaattgtggccactatttgataaacatttttctgtagaggagcaggataagattgtaggccgtataattggaagtacaggagctgaggttctgcagtcaatgttaccctgggttacatcagcgcttagtctagatgaacagaacaatatgctggacacatggaggcaagtaactaagaatacaatgtttgatgaatggctaaatgaatggtggaagagatcacctacttcttctggcccttcaagcgatgcctcccatccagaaggtctgctcaattaatttccatcccatctcccctcttcaaccacttccaccatattttagtttgctatgttatgtaggcactcactgttttccatttcataaaattgtgtcaaagctatatccttttccccattgaagaaacttctatcgaggcccacttgttatatattgtgttagataaaggtgttatcccttacaatggttatcaacaaataagattggccttctaatgagcaacatataaacttcatacattggttagtttctgtgttatctgaataaaaattatcactaattggacaaatgtagttggccaaaaggaaattcgggaaatgttcaaaagcaaagaagctgtaaaattatatccatgtatttgttgatatgtgataagtgataacaccatgacaacgaggacttcccaattgatgactaatttcaactgtcctagctagcgatagtgcaaatctattatgatgtaaatttgtgataaaagagatttagtgaagttggacttagcataaaggaaggtagaatggtgttagaagagagaaaagtagtgggtctgggatgtatatttatgataaaagattaagcactacagttttcatgatcagattttgaattatcttaactcttgttctttgctttggcctgtagaagatcatttccaggaaaagttcgatcagagtgaacagatgtttaagcctggttggaaggacatcttccgaatgaaccagagtgagcttgaggctgagatacgaaaggtttctcgtgattctactcttgacccaaggaggaaggcttatctaatccaaaatctcatgaccaggtttcttatatgaaattttcagaaaacaattttaggatcttttcctactgttcctccactacaatataggaagttattttgaatgactattgttttgctaattatattttttcagccgctggatagctgctcagcagaaatcgccccaacctcagtcagaagatcgcaatggatgtacagtattacctggatgttgtccttcataccgagatccagagaatcagatttttggctgtgagcattacaaaaggaaatgcaaacttgttgctgcatgctgcaataaactgttcacatgcaggttttgtcatgataaagttagtgaccatacaatggaaaggtaaactcagtgcaaccatgttgtctatttttttgagatttactgccaatgatacttctgtattggtcgcagtagtaatgtgttcaatattcatttttaaacaccaaacaacagacatcaataagcatgcagtggttaaagatttaactacagttagagaaccttgtgataaatttatatctgtgcaaaacagtgaggcagaatgattattttaggcatgacttgtggcctttgtattgtccctttcgttcttctcttcatctgttgttttcctcccaagtaaatgtttggttgaaatgatgcgatggcccaaaaagttgtccaatatgaacttttccgtctttagttttttaatcgctgtatttgcatgataggtgtatacagagttttaagaacatgtgagagaggataggaggcagaaactctcctgttttctatcatattatgtgttggttgttatagctttgttataatataaaatgctaaatgatattgctaagtctggggagctgatatgtcaggaaagcaacggtggaaatgatgtgcatgcaatgcctgaaagttcaaccagttggtccaaattgccagaccccttcttgcaatgggctatccatggcaaagtattattgcagcgtatgcaagttttttgacgatgaaaggtaaaaaaaaaaaaaggacgtggttgctagttttgctaactcgggagattgatggggtccaactttgcaatgttttggtgaccacgctaatagtgaatcttttttcaggagtgtgtaccattgccccttttgcaatttgtgtcgtcttgggcaaggattgggtattgattttttccattgcatgaagtgcaactgttgcctgggcatgaaattgatagagcataaatgtcgagaaaagatgctagagatgaattgcccaatctgctgcgacttcctatttacatcgagtgcagcagttaaaggtctaccttgtggccatttcatgcattcagcttgctttcaggtacaataatctagtcgcattctgatgcatggtttcttgagcgatatctcttactgtgagtagtgctgttctgacaagtttgtaaatttcaggcgtacacctgtagtcactacacctgcccaatctgctctaaatccttgggagatatgacagtaagctacaccacttaaataacattttttttcattcaccatagattatattttctccaactccatatttttaccatacacagaacagcttgtaaaaaattccgttcttctgattcagtagtgcagttaatgtatgttctttaaatcgcgtttctctgcaggtatactttggcatgcttgatggcttgctggccgcagaagagcttcctgaggaataccgggaccggtgccaggtaaattattctcctattcctagttaaaaaaatttcagtggctggggtataccgtttgatatgattgattgttccaggatatactttgtaacgattgtgaaagaaaaggaaggtctcggttccattggctgtatcacaaatgcggcttctgcggttcatataacactagagttatcaagattgatagagctgattgttcaacatcagattaaccaggcgagattttccctctcatattcgaaattccttttgaatatatatattgttgtaaatatacatcaacttaaagaaatccatgcg</dnaseqindica> |
| External Link(s) |
