Os12g0111000

From RiceWiki
Revision as of 21:31, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os12g0111000

Description

Conserved hypothetical protein

Version

NM_001072498.1 GI:115486957 GeneID:4351294

Length

1723 bp

Definition

Oryza sativa Japonica Group Os12g0111000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:582887..584609

Sequence Coding Region

583142..584404

Expression

GEO Profiles:Os12g0111000

Genome Context

<gbrowseImage1> name=NC_008405:582887..584609 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:582887..584609 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>caagcagcggccgcacagcctcctcctcccttcgccaagccgtcagatctggactccacggcgccgtcgcagccgccactccatgaacctgccgcgaccacgaacacgacgacgggagggtgctctcctcgcgctggcgatgctgcgtcctacaggagcacatcgccctggactacttcccggcttcccctgctccgagctctccaccgcccctgccaccgcgcgctctcccacggcttgcatcatcgtcaccgccaccaccaacaccacatcaacgccgcctccgtggtgcgcatcatgatccgcgaggccatcgaccactacggcttcgtggcgctggccacgcgcgtcatgttcgccgagctcgagaggttggcgaacatgacactgttcgcgctggacgaccaggccatcttcgtcggtgaaggccacgacgactccgtctcggcgcgcggtccgcttccacgtcgttcccgggcaccacctcacccatgccgatctccagcgacgccgcggctgctcctgatttgcggcatctggcgcggcggcttcggcggcgctactcgcgccccgctggtcgtccaagggcgccacggccaccccgacaccccaccgtcgtccttggcgtactggatacccggcacgggcggggagaggcggtgcaccacccgcggaaccgcaacctgctctgctccacctcgacgcggcgggcggggcggggcgaggcgagagggcgtggaaggaccacgtcgacgtcgttggcgagggctacgccatgctgctcaggatcgcccacatttggctcctccaccggcggaccaagtctgccacaattggcgcgcgcccagccatccccgtcgatcctcgtccggcgcgccgcaccctcgccggctgcgccacccacgcgctccaggacgacgcacgcgccacgcgttacttgggctactacgacggtggctgggtcttcatctccttgggccacacgacgcgctcctcagtctccacaaccttcgccgccatcaaccactctgcacccatgtcctcccctatccgccgaagacgtccgcgcgcgttcagggtgcttggaatcgctgggtgggcggatgctgttcctgttcgtcgctgcagtgcagatcgtacaatgcggacgactatccggccgccgacttcaacgtggttgccagcggccaagttctttgccggagcaagtcccgtcgaactactcaccgccggcgtggcttctaccccgttatgttagtttga</cdnaseq>

Protein Sequence

<aaseq>QAAAAQPPPPFAKPSDLDSTAPSQPPLHEPAATTNTTTGGCSPR AGDAASYRSTSPWTTSRLPLLRALHRPCHRALSHGLHHRHRHHQHHINAASVVRIMIR EAIDHYGFVALATRVMFAELERLANMTLFALDDQAIFVGEGHDDSVSARGPLPRRSRA PPHPCRSPATPRLLLICGIWRGGFGGATRAPLVVQGRHGHPDTPPSSLAYWIPGTGGE RRCTTRGTATCSAPPRRGGRGGARREGVEGPRRRRWRGLRHAAQDRPHLAPPPADQVC HNWRAPSHPRRSSSGAPHPRRLRHPRAPGRRTRHALLGLLRRWLGLHLLGPHDALLSL HNLRRHQPLCTHVLPYPPKTSARVQGAWNRWVGGCCSCSSLQCRSYNADDYPAADFNV VASGQVLCRSKSRRTTHRRRGFYPVMLV</aaseq>

Gene Sequence

<dnaseqindica>256..1518#aaccaccgccgcgtcccattcccaagtcccaccaccaccaccaccactcaccggcgggatgaggagtggccgtccccctccacccgctttgcccccacggcaccaccgctccgccgcgaacacgcccaaatcgaggcggaggacgcccagtcgctgcacctgctcgaccacttcgccgccgcgcctgccatcgctgctgtaggagcggcggcggaggagcaggaggcaaccccgacgctgatcgactccccgtagcaagcagcggccgcacagcctcctcctcccttcgccaagccgtcagatctggactccacggcgccgtcgcagccgccactccatgaacctgccgcgaccacgaacacgacgacgggagggtgctctcctcgcgctggcgatgctgcgtcctacaggagcacatcgccctggactacttcccggcttcccctgctccgagctctccaccgcccctgccaccgcgcgctctcccacggcttgcatcatcgtcaccgccaccaccaacaccacatcaacgccgcctccgtggtgcgcatcatgatccgcgaggccatcgaccactacggcttcgtggcgctggccacgcgcgtcatgttcgccgagctcgagaggttggcgaacatgacactgttcgcgctggacgaccaggccatcttcgtcggtgaaggccacgacgactccgtctcggcgcgcggtccgcttccacgtcgttcccgggcaccacctcacccatgccgatctccagcgacgccgcggctgctcctgatttgcggcatctggcgcggcggcttcggcggcgctactcgcgccccgctggtcgtccaagggcgccacggccaccccgacaccccaccgtcgtccttggcgtactggatacccggcacgggcggggagaggcggtgcaccacccgcggaaccgcaacctgctctgctccacctcgacgcggcgggcggggcggggcgaggcgagagggcgtggaaggaccacgtcgacgtcgttggcgagggctacgccatgctgctcaggatcgcccacatttggctcctccaccggcggaccaagtctgccacaattggcgcgcgcccagccatccccgtcgatcctcgtccggcgcgccgcaccctcgccggctgcgccacccacgcgctccaggacgacgcacgcgccacgcgttacttgggctactacgacggtggctgggtcttcatctccttgggccacacgacgcgctcctcagtctccacaaccttcgccgccatcaaccactctgcacccatgtcctcccctatccgccgaagacgtccgcgcgcgttcagggtgcttggaatcgctgggtgggcggatgctgttcctgttcgtcgctgcagtgcagatcgtacaatgcggacgactatccggccgccgacttcaacgtggttgccagcggccaagttctttgccggagcaagtcccgtcgaactactcaccgccggcgtggcttctaccccgttatgttagtttgatcgatcgtcccgtcctggtacaggtattcttgctgtcaatttgttcaagatttgcttcaagattgcaattgcagtttcagtttcagtcctcttgctgccaaggataatgcagttacagtttcagtcaaaatttgatgtcataatcgtggattggtacagttgctacaaatgctggatagtagtattaatttctcccttttctacc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0111000, RefSeq:Os12g0111000