Os05g0554000

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Revision as of 10:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0554000| Description = Conserved hypothetical protein| Version = NM_001187588.1 GI:297724306 GeneID:9269996| Length = 3795 bp| Definition ...")
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Gene Name

Os05g0554000

Description

Conserved hypothetical protein

Version

NM_001187588.1 GI:297724306 GeneID:9269996

Length

3795 bp

Definition

Oryza sativa Japonica Group Os05g0554000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27623710..27627504

Sequence Coding Region

27626399..27626555,27626815..27627020,27627133..27627216

Expression

GEO Profiles:Os05g0554000

Genome Context

<gbrowseImage1> name=NC_008398:27623710..27627504 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:27623710..27627504 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tgctattttgtgttgtggaggccgacattgttactcggggagttacctgtttgttccttcaaacatgtgctcttacgtgaacatggatatggtggtgtttacaatcaacacgcatctatcagcgatgtcgtcttaagtgtggactccacttcactaagtattgctcggggttgcggatggcagcacctgggagcctatgtaaacctcggttcattctacctggttggcattccggtagccctacttcttggctttggtttcaagatggaaggcaaagggctttggctgggcatcgcctgtggttccgtattacaattcttgcttctcgccgtcattgcattcttcagcaactggcaaaagatggccgagaaagcgagggagagaattttcggcgagacaccgtcagagaagcaacatttggtgcttgatgcaacgaattcggtctga</cdnaseq>

Protein Sequence

<aaseq>CYFVLWRPTLLLGELPVCSFKHVLLREHGYGGVYNQHASISDVV LSVDSTSLSIARGCGWQHLGAYVNLGSFYLVGIPVALLLGFGFKMEGKGLWLGIACGS VLQFLLLAVIAFFSNWQKMAEKARERIFGETPSEKQHLVLDATNSV</aaseq>

Gene Sequence

<dnaseqindica>2690..2846#3106..3311#3424..3507#agacaccaaagccgtctctgagaagaagagagggagagagagagagagagagagagctcggtcggtggaggcgacgacgacgacgcgcgcactgcggccgccatggaggagagaatacctctgctctcgaaacgattcccggcggacggcaccgccggagtgggaggagggagggaggaggagggcggagataggtggtggagcgggctggcgcgggaggcaggaaaggtggggtccatggcgctgcccatggccgcgatgagcgtggcgcagaacgccgtgcaggtggcgtccaacatgatggtggggcacctccccggcgtcctcccgctctccgcctccgccatcgccacctccctcgccagcgtctccggcttcagcctcctcgtacgtcgtcatcgcatatcctgatttccccactcgttcacgcgtcctcgatttgcttatatccatatttgttgcctgcgtgatttggtctcattggattaactgtttagcactttagccagagaggcacgtttcacggtttcagatattgttcaatgtggcgttcaaatttagcagtaggaggacaggcaaaaagtttagccgtacaagcggctggttagtttggaagggggattttgattggaacagtgcctaaaatttttgctggaatactgtttgaacatttggcgtgttccaaacattctgaaataaatcatggatatagcatagtaagtagcagattttttttttttgggtatacaagtagcagtttgcaaacctacaaaatttaaaatcaacgttctcctaaatatagagataaataacaagttacactactagtctactactccacgctgaatgcttttctaggatgaattttaaattgcctgcacagatggtgagctagtcaattgtcacgatttcaactagctttcagaatctgcgaagtgtgtacagcctagaggactacttcgatactctggcgaaatattctgtaggattttttttttttacttttctcttcagttgtacacggattgcctttttagtttgtgatcttaattttgaaaccacccataatttgaattttgaacttgtaaaacaggttggaatggcaagtggattagaaactctctgcggtcaagcttatggggcaaaacagtatgacaagttaggagtgcaaacctacagagcaatagtcacactaacagtagtcacaattcccatctcacttctatgggtattcataggcaaactcttgaccctaataggtcaggaccccgtgatctcacatgaagctggaagatacatagtgtggttgattccaggactcttcgcatacgcggtctgccagcctctcacaaaatttctgcagtctcagagtctaatatttcccatgctctggtcctccattgcaactctgctcctgcacatccctctgtcttggctgttggtgttcaagaccagcatgggatttactggagctgctttagcaattagcatatcttactggttgaatacattcatgctcgctgcatacatcagattctcatgttcttgtaaggtgactcgctcgcctcctacaatcgaggcattcagaggagtcggtttgtttctgcgaatagcactaccatctgcactaatgttatggtaattacagtagcttcagaatctccttgttttatatgtaagtatttcttatttcctgttaaaaaattcccacttattggattaatggattttcttctattattttgtagttttgaatggtggtcatttgagatccttgttctcctgtcaggacttctacccaacccagagcttgaaagttcagttctttccatatggtaagaaaataagagtcctcaatgtcgcacttaacaatatattctcttatagctgcaccttttgttattttataagcactccatttatgcagcttgacgactacctctttgatgtatactataccatatggtcttggaggcgctgcaaggtagaagccaaaccactactgtgaatgattattttttctcagagaataatcatgtgttaacagccttgtgaattttgttttaatgaacagcactcgagtagcaaatgagttaggcgctgggaatcctgaaggagctcgatcggctgttcaccttgtaatgtctattgctgggacagaggcagttcttgttactgggatgctgtttgcagcacagcgcatcttgggctatgcttacagcagtgatgaggaggttgtcacatatttcacctcaatggttccttttgtgtgcatctcagttgctgctgatagcctacaaggagttttatcaggttacatttcctaacatttgatttatctgttaattattcattcccttcaaaagaatggaaaaaatggagtattcagctatgcctgaagttttcgaaaatttgatctaactggccttgcctctctcttatttcattttttttatataactggttcttatagttttggggccattacatttacaccattcagtatctttagcctgttagcccaacggtatcttttaccccttagtttgattgcttaattcaatgtgtgcgctgttgtcaaatctctaccaagacctcaggtagcaagttaatttcagtcactccggtatcgtaaagacataccaggtaacttgccgcttcttgtttttcctttgttcaatgaaactaatgctattttgtgttgtggaggccgacattgttactcggggagttacctgtttgttccttcaaacatgtgctcttacgtgaacatggatatggtggtgtttacaatcaacacgcatctatcagcgatgtcgtcttaagtgtggactccacttcactaagtatgcaattacacctttcccctggctagtggtagactggtagtgtggcactggtgtttgcttcacaggtctatttcattgtttgtgcttctgagcagttgtggacatgccaaaaacaatgaactgaacttgcgaaaacacacatctcattcagctccagcacggaaacatactattgtttctcctctctagaagattatatcaagatagatgcaccacacgtcattgcttaacactgacagatattacttgttatcaggtattgctcggggttgcggatggcagcacctgggagcctatgtaaacctcggttcattctacctggttggcattccggtagccctacttcttggctttggtttcaagatggaaggcaaagggctttggctgggcatcgcctgtggttccgtattacaattcttgcttctcgccgtcattgcattcttcagcaactggcaaaagatggtttgtttctttatctgaaactccaagccttctccccaacatcatcaaatcttgatcactcgaaaactgaatcatgtttctcccgcctactgacctgatgctgcttctgcaggccgagaaagcgagggagagaattttcggcgagacaccgtcagagaagcaacatttggtgcttgatgcaacgaattcggtctgattctgcatcctgatccgttgacgcgaactgaagcggatgatcggatcatgtggaggagactggctcctctggatgtgtagggaatctgctgaagaagtaaagcagtgtgcatagttgtactgttgcatttgttggatccgggagaatgtatcaagaactctatgtgaaatgtatgatggcgatatgtatgtacgagatcgaggttccgaatacttccagcctatagaagtatagataaattttccactcttcgtggacagaaagaataaaaggctaatcttctctcgg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0554000, RefSeq:Os05g0554000