Os12g0123900

From RiceWiki
Revision as of 21:31, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os12g0123900

Description

Hypothetical protein

Version

NM_001072568.1 GI:115487097 GeneID:4351371

Length

4098 bp

Definition

Oryza sativa Japonica Group Os12g0123900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:1150631..1154728

Sequence Coding Region

1150949..1151041,1151246..1151460,1151541..1151637,1151711..1151908,1152024..1152086
,1152384..1152443,1152558..1152660,1154398..1154507

Expression

GEO Profiles:Os12g0123900

Genome Context

<gbrowseImage1> name=NC_008405:1150631..1154728 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:1150631..1154728 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggctgcctgggcggcggcggtggccgtgatgctcctccttgcgcaggtgtcagcggcggctccggtgatggggcctgccttcctctgggcgcccaataactacggattctcttctgatgagactaaagaaatggtctactatcagacagtatccccaaagagcttagtgaaatctgttcttgaggaaggtggttggtcaaacttggtgtgttcaagggaggatcatgcaaagagtgttgatgttgcagttctttttcttggctcgaagctacaatcatcagacatttctaaagaaaagcaagctgattcaactttagtagacatgctgaagaactcctttgcaagctccgagttttccatggcattcccctatgttgccatgtcagatgatgacaaattggagaagtcattgctatctggatttgctgagaattgcaacaatggtcttggaaataatcatatcacctacacagacacctgttctgtaagtgaagatctgaagaaacatcacgacatggattccattcatggattggtggcatcacaaactaaaaagaacccaagtggacagactgatctggttgtcttctgtgatggtggtttcaaggataacacaaaatcagaaggggagttactttctgagctggttactctgctgaagaagtctggagctaaatatacaattctttatgcttctcagccctatggtttgctagagagcccttcaaacctgccgttaggcaggtacctcgcagagaagactaatactactaaacccggccgtggaaaatgtgatggggagtgcttagtaaaatcaactctgctagaaggaagctttgttggaatagtgctgctaatcatcttgatatcaggactcaaatgtatgatgggaattgataccccatcaaagttcgatgctcccccggaatcgtaa</cdnaseq>

Protein Sequence

<aaseq>MAAAWAAAVAVMLLLAQVSAAAPVMGPAFLWAPNNYGFSSDETK EMVYYQTVSPKSLVKSVLEEGGWSNLVCSREDHAKSVDVAVLFLGSKLQSSDISKEKQ ADSTLVDMLKNSFASSEFSMAFPYVAMSDDDKLEKSLLSGFAENCNNGLGNNHITYTD TCSVSEDLKKHHDMDSIHGLVASQTKKNPSGQTDLVVFCDGGFKDNTKSEGELLSELV TLLKKSGAKYTILYASQPYGLLESPSNLPLGRYLAEKTNTTKPGRGKCDGECLVKSTL LEGSFVGIVLLIILISGLKCMMGIDTPSKFDAPPES</aaseq>

Gene Sequence

<dnaseqindica>3688..3780#3269..3483#3092..3188#2821..3018#2643..2705#2286..2345#2069..2171#222..331#aacctgccccttgttccacaacgacgaacaacatctcgccacgaggaggagggcgagagcttacacgagtccgaaatccccaatccgggatcccctgcttctcttcgcgccaaggtaagatctctcacggatctctgtgcttggcagcgcggatcgaatttttgtcattacttgtcctaatttttgttccggggtgtctaatttgggtccgatccgatcagatggcggctgcctgggcggcggcggtggccgtgatgctcctccttgcgcaggtgtcagcggcggctccggtgatggggcctgccttcctctgggcgcccaataactacgggtaacttgttgccacagcgtttctctttttcatcgtttcaagcctgagatcccttttgctagatatgtatgaatgtattaataatgttaacgatttttagtgaactctgctgcttcacttagaaaaggttgcaatttggtatagcgagtattgacataacacataactcttcatgaggtgcatgcgatttactgctcttcttttcttgaacgaatagtgcatatgcagttcgttcctcatgaaacaggaggcttcatgatcggataattagtttcctttgtatctaaggccacacccttgactctagccctgtgtgccatagatgatagaatcttcttgggcattcccaggagtgatcctcgcgttgtctcatggggtccagatcaaccacattcctttgaaactgcatcctcaagaaacgcccaggggtcttccagctagctccacaaggtggtgggctagatgacctgggttcgaagcctcaccccttctaattatttgatattaggtccttccctaatattcgcgtctttttttttcgaaactgcatcctcatccatcattcagtacagacaatcaatatggaggttttaaatctagaacaaccatagattccatagttggaggatttcggagttctcaacttatactgatcaagcagttaccttgcacagttgcccatttcctgctactacttcacatcagcgctccattttgctgcggagagtaaatgtataatttctttcgtcaaattccaatttatatggtggagggtggagtagggtggttgagagaaatctcagttggaagtgggatactggaaggttgatgagaggaaaggatgaaacccatacccatttagcaccctttcatttttggtcatatgatctggtatatacatatcaaaaccttctagttagaacgaagaacagagattgtcttgctgcttaggttttgtgttacagatttgttcagcttttctaacatgctcactcctatttgtgttgatattaggaaagtaaagtagggtatcagttaagacaggcctccattttgtatttgattttgcacagtgcacactggaatatcatggcttgcttcaaaaaacattaccttcttagatttttttagctcagctagggagcatttttatgtttttttttccatggggtttgtagtaatgctgcacacttatgtcttaagcatgctttccttagtagacaggtgcatccgtgcatgtggccgttagatatgctgtctttcttgcatggaaacttgcaatccaattgaaatcctgctaaaaattagtaatagagctccatggggctggctctaaaaaaatgattttgtgtttgcttcagctcttattttatatggacaatctttggcctctaattgaaaaagatcttgaaactatgagttccattaaataggctatggcgagttcctgagcaatatgttatccttatctgagataataagaacattaaagcaatggagtaatgcaacttcatcactgattcttgcctagagcatatgttgcacctggtctgtactgtagatggcaatgtcatgcatatgagggtcacccatttttgttggtgcctcacattttcagttacttgctggctagattgaaattaccagttcatatagaaaatatttgctgaccttcttgtggttattttaatcaaagtttagttgtataaattacattttatttaccttgctcgccagattctcttctgatgagactaaagaaatggtctactatcagacagtatccccaaagagcttagtgaaatctgttcttgaggaaggtggttggtcaaacttggtggtgagttgagttccccccacgtcaattcacaaacaactgaccaatttcaattgcagtatctgctcttattgtgcacaaactcaaacaattcataacattgtgattttattttagtgttcaagggaggatcatgcaaagagtgttgatgttgcagttctttttcttggctcgaaggtacttattgactcccattcatttggtactgtgaactagtgtttaggtcttcactggttgcaatgtttacataattattgattcagtccacattgatcaaaaaattggaatacattttcttcatagtgtttctgatagacgataataatcaatactaagaggccataacatttccaaattctcttgtttgaatctgtatgtcaaaattattgctagatcaagtaatttatattatgatgctgtttcaatttttcaatgcttcagttgaaactgactgataacttattgttcctgtagctacaatcatcagacatttctaaagaaaagcaagctgattcaactttagtagacatgctgaaggtattcataatcactcttcttttgtccatcccccttatttgtatttcccctagttgttatataactgaaaaattaaagatttttaaatgcttataatatctatgctctttactagaactcctttgcaagctccgagttttccatggcattcccctatgttgccatgtcagatgatgacaaattggagaagtcattgctatctggatttgctgagaattgcaacaatggtcttggaaataatcatatcacctacacagacacctgttctgtaagtgaagatctgaagaaacatcacgacatggattccattcatgtaagtttttatagttcttttggtacttcttgcaatttctcttttccatttattgaccacatgtacattccagggattggtggcatcacaaactaaaaagaacccaagtggacagactgatctggttgtcttctgtgatggtggtttcaaggataacacaaaatcagaaggttaggtcaaagatgctaggttggtcctttcacctcaaatatacaactgtaccttaatgttatgctaattttttctgtaggggagttactttctgagctggttactctgctgaagaagtctggagctaaatatacaattctttatgcttctcagccctatggtttgctagagagcccttcaaacctgccgttaggcaggtacctcgcagagaagactaatactactaaacccggccgtggaaaatgtgatggggagtgcttagtaaaatcaactctgctagaaggaagctttgttgtaagttgtcccatggactgttttttttattggttactttcattctgtcatgtagacttaagcctataatgttttccaacaaaaacagtataattttagaggtagttgacttctcttattgactttactgcaaaattttatttctatatcactatttgttatcctagaattattttctcacaatagttcgtttatgatatgcagggaatagtgctgctaatcatcttgatatcaggactcaaatgtatgatgggaattgataccccatcaaagttcgatgctcccccggaatcgtaagcccatttttaagcagatctgaatggaaactcaaggcaaacacgaggggaaaattgaatagctgatgtagcaggtctgtactgtgaatatagttagtttgctacttattgccttatgtattttaatgagccaactgcaatttgcagtcaatttttggtggaatattacatttcaaaacgtacacgtgcaaggcctgatttgtaccatataacactgcctctagtgtttgctgtgtgaataagctggaattaaaacctgttttggaataagatgtcacagttcatcgaataaaaccttgcgatatatttcattattttc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0123900, RefSeq:Os12g0123900