Os05g0555600

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Revision as of 10:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0555600| Description = Similar to NADH dependent Glutamate Synthase precursor (EC 1.4.1.14)| Version = NM_001062809.1 GI:115465348 GeneID:43...")
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Gene Name

Os05g0555600

Description

Similar to NADH dependent Glutamate Synthase precursor (EC 1.4.1.14)

Version

NM_001062809.1 GI:115465348 GeneID:4339561

Length

5240 bp

Definition

Oryza sativa Japonica Group Os05g0555600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27712793..27718032

Sequence Coding Region

27712795..27713136,27713290..27713508,27715830..27716104,27716197..27716502,27716651..27716918
,27717068..27717322,27717443..27717709

Expression

GEO Profiles:Os05g0555600

Genome Context

<gbrowseImage1> name=NC_008398:27712793..27718032 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:27712793..27718032 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gcttatgtttatgatgtggatgggaagttcagtagccgttgcaactatgagctagttgacttgtatgctgtagttgaagaggatgacatcacaacattgagaatgatgatacaacagcacagacttcatacacaaagtgatttggccagagatatactcttgaattttgatactctcctcccaaaatttataaaagtatatccaagggattacaagcgggttttggataaactaaaagaagagaaggctgctaaagaagcagagcaaaaggcaagagaagtggtggataagaagccagttgaagtaattcaagctccaaatggcatttcagtaaagacagagaaagtaatgaacgaagagccatcaagccgaccatcacgagtttcaaatgctgtaaagtaccgaggtttcataaaatatgagcgagagggtacttcttacagagatccaaatgagcgtgtaaaagattggaatgaagttgcaattgaattggttcctgggccactgctaaagacgcaatctgctcggtgcatggattgtggcactcctttctgtcatcaggagggttctggtgctggttgtcctcttggaaataagattcctgaattcaatgaattggttcatcagaatagatggcatgaagccttggatcggctacttgagacaaacaatttccctgagtttactggacgagtttgtcctgctccttgtgagggttcgtgcgtacttggcattatagacaatccagtatccataaaaagcatagagtgcgccatcatagacaaaggatttgaagagggatggatggtaccacggcctccacttcggagaacaggaaagagagttgctattgttggcagtggcccagctggtctagctgctgcagaccaactgaacaaaatgggccatttcgtgactgtctttgaacgtgctgaccgtattggaggactgatgatgtatggggttccaaatatgaaggctgacaaagagggcattgttcagcgacgtgtcgagttgatggctaaggagggggttcaattcattgtgaatgcccatgttggaagtgaccctttatactccgttgaaaagctccgctctgagaatgatgccattattttggcctgtggagctacaaagccaaaagatctccctattcctggacgggagttggcaggcatccatttcgctatggaatttcttcatgccaataccaaaagtttacttgacagcaacttggaggatggtaactacatatcagcccaagggagaaaggtggttgtcattggtggtggagacacaggcacagattgcattgggacatccattaggcatggttgcaccaaccttgtaaatcttgaacttttgccagagccaccaagaaagagggcacctgacaacccctggccccagtggcccaggatcttccgtgttgattatgggcaccaggaagcaactagcaagtttggaaaagatccaagaagttacaaagtcctgacgaagcgatttatcggagatgagaatggaaatgtgaaggcccttgaggtaatacgtgttgaatggggaaaggtgaacggaaggttccaattcaaggaagttgaaggatcagaagaaattattgaggccgatcttgtcctcttagctatgggattcctgggtcccgaagcgactgttgctaacaagctgggtctagaacaagacatgaggtcaaacttcaaagctcaatttggaaactttgcgaccaatgtggaaggtgtatttgctgctggagactgcagacgtgggcaatcactggttgtttgggccatcacagaggggcgccaagctgcagcagccgtagacaattacctgtcgaaggatgatgaaggtgaaaccaatggcacagaggacattgctgtctcaagtgaaggtctggtccaacccgtagttgcatag</cdnaseq>

Protein Sequence

<aaseq>AYVYDVDGKFSSRCNYELVDLYAVVEEDDITTLRMMIQQHRLHT QSDLARDILLNFDTLLPKFIKVYPRDYKRVLDKLKEEKAAKEAEQKAREVVDKKPVEV IQAPNGISVKTEKVMNEEPSSRPSRVSNAVKYRGFIKYEREGTSYRDPNERVKDWNEV AIELVPGPLLKTQSARCMDCGTPFCHQEGSGAGCPLGNKIPEFNELVHQNRWHEALDR LLETNNFPEFTGRVCPAPCEGSCVLGIIDNPVSIKSIECAIIDKGFEEGWMVPRPPLR RTGKRVAIVGSGPAGLAAADQLNKMGHFVTVFERADRIGGLMMYGVPNMKADKEGIVQ RRVELMAKEGVQFIVNAHVGSDPLYSVEKLRSENDAIILACGATKPKDLPIPGRELAG IHFAMEFLHANTKSLLDSNLEDGNYISAQGRKVVVIGGGDTGTDCIGTSIRHGCTNLV NLELLPEPPRKRAPDNPWPQWPRIFRVDYGHQEATSKFGKDPRSYKVLTKRFIGDENG NVKALEVIRVEWGKVNGRFQFKEVEGSEEIIEADLVLLAMGFLGPEATVANKLGLEQD MRSNFKAQFGNFATNVEGVFAAGDCRRGQSLVVWAITEGRQAAAAVDNYLSKDDEGET NGTEDIAVSSEGLVQPVVA</aaseq>

Gene Sequence

<dnaseqindica>3..344#498..716#3038..3312#3405..3710#3859..4126#4276..4530#4651..4917#ttgcttatgtttatgatgtggatgggaagttcagtagccgttgcaactatgagctagttgacttgtatgctgtagttgaagaggatgacatcacaacattgagaatgatgatacaacagcacagacttcatacacaaagtgatttggccagagatatactcttgaattttgatactctcctcccaaaatttataaaagtatatccaagggattacaagcgggttttggataaactaaaagaagagaaggctgctaaagaagcagagcaaaaggcaagagaagtggtggataagaagccagttgaagtaattcaagctccaaatggcatttcagtaaagacagaggtaaataaggtttaagcaggattatttctcattctctatatcggtgatatttaacttgactgttggaaatttatgatgtccttcttaaaatagttattattgtaattctgtaagctaagctttctagtctgacttaaagtctttgatatgcagaaagtaatgaacgaagagccatcaagccgaccatcacgagtttcaaatgctgtaaagtaccgaggtttcataaaatatgagcgagagggtacttcttacagagatccaaatgagcgtgtaaaagattggaatgaagttgcaattgaattggttcctgggccactgctaaagacgcaatctgctcggtgcatggattgtggcactcctttctgtcatcaggtgatactcagtttttttcccttttgtattaagcagttttttttcataaaatacaatgatgcttttcagtacagtagttttatatgaatgtcacccggcaaaaaagttttatatgaatgtccttgatgctcttgatttcttgtccatatatattagtgcatatagtcgtgcattcgcacgaatttaaccatcctctatactgaatatctttacatattatttgtagtaacaaaatatacttccctttttaatagatgacactgttaacttttaacataatatttaatcattcatcttattaaaaaatattatgtaaatgttaatttttttggtctgacttgttttatcattactgcgttatgatattttggtaagttggcaatggtagggtatgcttagttagttaccctataaaatttggtatttttttctattttatttaatttttaggtaaactaaattcataatattttactttactttagaaagtgtgttcgttgaaaaaaaaactgagatggttaatttgtgtgctaaacaaaaccgacaatcgagtgtactttatgcaatgtttaaaaaagtgtgtaaagaatataatctatctattatattattaaaggaatagaaaaagaagcctccacgttcgctctcatggcctagaaattctcacattaatcggagaaaaagaaaagacagagtccatatagaaatacaatttagaaatagctgaaatttggaattaaaaaataaggaatattagaagaggagactagagtccatatagaaatacaatttagaaatagttgaaattcggaattaaaaaataaggaatattagaagaggagactagagtccatatagaaatacaattaggaaataactgaaattcggaattaaaaagaaggaatattcgaagtagagtatagagtccatatagaaatacaattaggaaataactcaaattcggaattaaaaaataaggaatattagaaaaggagactagagtccatatagaaatataatttaaaattagttgaaattcggaattaaaaaataaggaatattagaagaggagactagagtccatatagaaatacaattaggaaataactgatattcggaattaaaaataaggaatattagaagtagagtatagagtccatatagaaatacaattagaaaataatagaaaatcggaattaaaaataatgaatattagaagtagagtatatagtccatatagaaatacaattaagaaaaaaaataaattcggaattaaaaaataaggaatattagaagtagagtatagagtccatataggaatttaaaactaactaaaattcagaataaacataataaaattaaaagtagagtttagagtctgtataaaaatacaatttacaaataactaaaattcgagattaagaaaaacatggaaagaagagtttaaagtcaatataggaatacaatttagaagtaactgaaattcgaaattaaaaattaaagaatattgaaagataagtttagagtccacatagaaatacaattagaaataataaaaattcagaaataaaaataaataatattggaagaagagcctagagtctatatagaaatacaatttacagaaaatttggaattaaaaaaatatattaaaagatgagtctagagtccatataggaatatatatattttacaaataactaaaatttgatattaaaaataattaataactaacacgtatataaaatacaatatgaatattacacattagtagtttcgtaaagttattgcaaaatctaaaattatgttgtcattttaatatatttggataatatattgagaaaacatatatgctattatatgagagaaaatataatgatgctagccgcgcaatctgcgcgggacaccatgctagtttcaatagtaaaactcaaaactttcaaggttcttcacgtatacgaggttttaattgtacacaaggtataaaaataatttaccaatattcaaaactcaaaacctccaaaattatacgcctaagaaaaaaatattttttaggcttaaaaataaaaaggtgccatggttgtgacatattggcaggttcagaggtggacttggaatatctagtaacttccttgccactcttccatcggacagctgagatttattcttcagtttttgtccttttatcgattctatggccattatttactacatgatgtggctttttctctttgcatcatcagattgtcttttcacttgttaagatttgtgaaattttcttggtatggttcctgtatttttcttatatcaaacttttgcaggagggttctggtgctggttgtcctcttggaaataagattcctgaattcaatgaattggttcatcagaatagatggcatgaagccttggatcggctacttgagacaaacaatttccctgagtttactggacgagtttgtcctgctccttgtgagggttcgtgcgtacttggcattatagacaatccagtatccataaaaagcatagagtgcgccatcatagacaaaggatttgaagagggatggatggtaccacggcctccacttcggagaacagggtgtgtgttcggcacaactttgtacttgctttcttatatgagttgaagcatgtaacaatagctgcacctaaagctacttcatttttttgcagaaagagagttgctattgttggcagtggcccagctggtctagctgctgcagaccaactgaacaaaatgggccatttcgtgactgtctttgaacgtgctgaccgtattggaggactgatgatgtatggggttccaaatatgaaggctgacaaagagggcattgttcagcgacgtgtcgagttgatggctaaggagggggttcaattcattgtgaatgcccatgttggaagtgaccctttatactccgttgaaaagctccgctctgagaatgatgccattattttggcctgtggagctacaaagccaaagtgagttaatacaaaaacgaaaaaaagaagagtttgtaactctagtttacatctttcttggcaccagtttttaaagtctaagcaacacagtctatatcattcatgcctttgaaacttggctaatgtttagagcattatccttgagcagagatctccctattcctggacgggagttggcaggcatccatttcgctatggaatttcttcatgccaataccaaaagtttacttgacagcaacttggaggatggtaactacatatcagcccaagggagaaaggtggttgtcattggtggtggagacacaggcacagattgcattgggacatccattaggcatggttgcaccaaccttgtaaatcttgaacttttgccagagccaccaagaaagagggcacctgacaacccctggccccaggttagttccctcatcatataaaacaacagcatctttatattctttttttagtgaaaatctttgtatgtttagaatgtaagcattgcgccactacggttgcctgaaattccactaacattactctgttgtgtttctactattgccttcagtggcccaggatcttccgtgttgattatgggcaccaggaagcaactagcaagtttggaaaagatccaagaagttacaaagtcctgacgaagcgatttatcggagatgagaatggaaatgtgaaggcccttgaggtaatacgtgttgaatggggaaaggtgaacggaaggttccaattcaaggaagttgaaggatcagaagaaattattgaggccgatcttgtcctcttagctatgggattcctgggtcccgaagcggttagttttcctccctttctcttatgagttatgacaagaatagcattacacaattgtgcacatagctatctgtttagagaccaaccaacacatagtgcctaactgcatatccttctacagactgttgctaacaagctgggtctagaacaagacatgaggtcaaacttcaaagctcaatttggaaactttgcgaccaatgtggaaggtgtatttgctgctggagactgcagacgtgggcaatcactggttgtttgggccatcacagaggggcgccaagctgcagcagccgtagacaattacctgtcgaaggatgatgaaggtgaaaccaatggcacagaggacattgctgtctcaagtgaaggtctggtccaacccgtagttgcataggccgagagaacatttctgcaattttgatacagcattgatgatgcgaagatagtagggccatgcattttttagctataaaaaggtaaaataaagggcctgtaaataatttacaagaaaagggggcccttttgtttatataagtatgataaaagggaaattttgcggacgcgtatattttttccctgtttcttcttgtgaagagatgcaaatcctgtgattataagagcaatgtctggtttttgttaaataaatgtgaggggattctgttaaaaacatctatttattatgtgtaagtacataatggatcttcgtgtttctcttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0555600, RefSeq:Os05g0555600