Os05g0556400

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Revision as of 10:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0556400| Description = DOMON related domain containing protein| Version = NM_001062815.1 GI:115465360 GeneID:4339568| Length = 3020 bp| De...")
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Gene Name

Os05g0556400

Description

DOMON related domain containing protein

Version

NM_001062815.1 GI:115465360 GeneID:4339568

Length

3020 bp

Definition

Oryza sativa Japonica Group Os05g0556400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27747910..27750929

Sequence Coding Region

27748044..27748202,27748642..27749044,27750050..27750336,27750456..27750716

Expression

GEO Profiles:Os05g0556400

Genome Context

<gbrowseImage1> name=NC_008398:27747910..27750929 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:27747910..27750929 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcgcgtgtcggcggcggcggttgccgtgctggtggtggcgttcgcggcggcggcggcggcgcaggagagctgcaacaccgagctgccgggcgtgctcgtcggcaactactccggcctgaattgccagccggtctggaacaatttcgtgctccggtatcaccaagacaagaacaacgtgctgagggtggtgctgtcgacgatgtacagcacggggtgggtggggatggggttctcccgggacggcctcatggtgggctcgagcgccatggtcgggtggatcgggcggaagggcctcccgcacgtcaagcagttcgcgctgcgcggcaagacgagcggcaaggtggtcgtcaaccgcggcttcctcgtctccaactccaacaaccacgaccacaccgtcgtggtgcagcaggccaggatctacctcgcgttccagctccagttctcctaccgactcacccaccagcacatcatcctcgccttcggctcctccatccccgtcaacaacaagctcaccaagcaccaggacaagacatccttcaccttcgatttcaccactggtaaagctttcgtggacgggtcgttcccctacggtctgaggagggcacacggtgctctgaacctgttcgcgtggggcgtcctgatgccgatcggcgccatcctggcgcgctacttccggcggatggaccctctctggttctacctccacgtcggcgtccagttcgtcgccttcatcatcggcctcgccggcgtcgtcgccggagttgccctctacaacaagatccaggccgacatcccggcgcacaggggcctcggcatcttcatcctcgtcctcggcatccttcagattttggcgttcttcctgcggccgaacacggactccaagtaccggaagtattggaactggtaccaccactggtcgggcaggctggtgctgttcttcgccgccgtcaacatcgtgctcggtatccacgtcggcggcggggacaactcgtggaagatcgggtacggcttcaacctcgccatcatcctcctcgccgtcatcgggctggagttcatgctgcggacgaggtggtccaaggaaagcgagcccacgccgacgtactag</cdnaseq>

Protein Sequence

<aaseq>MARVSAAAVAVLVVAFAAAAAAQESCNTELPGVLVGNYSGLNCQ PVWNNFVLRYHQDKNNVLRVVLSTMYSTGWVGMGFSRDGLMVGSSAMVGWIGRKGLPH VKQFALRGKTSGKVVVNRGFLVSNSNNHDHTVVVQQARIYLAFQLQFSYRLTHQHIIL AFGSSIPVNNKLTKHQDKTSFTFDFTTGKAFVDGSFPYGLRRAHGALNLFAWGVLMPI GAILARYFRRMDPLWFYLHVGVQFVAFIIGLAGVVAGVALYNKIQADIPAHRGLGIFI LVLGILQILAFFLRPNTDSKYRKYWNWYHHWSGRLVLFFAAVNIVLGIHVGGGDNSWK IGYGFNLAIILLAVIGLEFMLRTRWSKESEPTPTY</aaseq>

Gene Sequence

<dnaseqindica>135..293#733..1135#2141..2427#2547..2807#tgcaacctctcatcaaccggctctctcctcctcctaaaccgggcagcttctctctctcgcgttgctgccgcgcgcggggcacacagctaagctagtgtcgccattgccattgtcttggaaggaggttggttagcatggctcgcgtgtcggcggcggcggttgccgtgctggtggtggcgttcgcggcggcggcggcggcgcaggagagctgcaacaccgagctgccgggcgtgctcgtcggcaactactccggcctgaattgccagccggtctggaacaatttcgtgctccgggtaagtggtttctcccaccgccattgttcttacctgttcttctcagcacataattgaggttgtgtagcgctgttcgagcatagctagctctaagttcagtactctgcgtgtgcttgcaatgagctgagatctgcaaggatttcaggtggatctagtttgtacctaacctgctaggacattgccaactgcccaactgaaattgatgtatgattcgctagtgcagcagtaagccagtaacttttcagtgacagtaaaacagtgaattcgagcaaaccaaaccacacaattgccaagaaaaatcctgaagtgttacagttagtttcgactctaccattccaaaacaatctcaattcagactctcatacaattatgacaatgtaaatcacttccattttctaaaaattcggactctcacatactccaatgcatatatgcgcagtatcaccaagacaagaacaacgtgctgagggtggtgctgtcgacgatgtacagcacggggtgggtggggatggggttctcccgggacggcctcatggtgggctcgagcgccatggtcgggtggatcgggcggaagggcctcccgcacgtcaagcagttcgcgctgcgcggcaagacgagcggcaaggtggtcgtcaaccgcggcttcctcgtctccaactccaacaaccacgaccacaccgtcgtggtgcagcaggccaggatctacctcgcgttccagctccagttctcctaccgactcacccaccagcacatcatcctcgccttcggctcctccatccccgtcaacaacaagctcaccaagcaccaggacaagacatccttcaccttcgatttcaccactggtacgtatatattcctcaggttataagacgtgtcaaagtcaaactactttaaatttaactaagtttatacataaatatagtaatatttataatactaaattagtttcattaaatcaataattgaatatattttcataataaatttacgttgagttgaaaatattattttttctataaacttagtcaaacttgaagcagtttgactttgaccaatgtcaaaacgtcttataattttcagagggagtatattatatgcttctcatcaacctgatcttgatcttctcctctctccctctgtttaatttggacaacttgacattttcgctgcactatgtgtgaggttcagagtgaagtccctgacggtggttagcaaatctgttgatgaatgacattgcacctaactggaaaattgaataataggagtaacaaattacagttgacatcttagtcgatcctatataccataaaaaatgagctgacaatatcacttgaactgtaatcaatgtgtcagttagcgaaaaaggtgtttgattcttgaagtttcagtcgtcagtcgccacttttctgttgccgtatcaacattcttccttggtggcattatgtgcacaacaagatgcttttacacactccgtcttcaaatactagacctcttattggatactactcatattcatctttaaactttaactacttatcttttaaaaaactatataaatatttaatcaagtgttgcatcctaaatatacggccccatcgtatcgctcaaacgaaaaataatttgtgaataaaacttttatacatattttcttagcgatttaaaaacaaagactgaaaaataaactttaatgaaaaaaaccccaaaatcaattttaaatttgatgttgaaaatttaaattttggctggtaagtataagtataagcgaaaagatgaggccgatagttgtgaaacttgagggagcattttcgaaaacatttttttttacagcagagttgatgaatctgcaggtaaagctttcgtggacgggtcgttcccctacggtctgaggagggcacacggtgctctgaacctgttcgcgtggggcgtcctgatgccgatcggcgccatcctggcgcgctacttccggcggatggaccctctctggttctacctccacgtcggcgtccagttcgtcgccttcatcatcggcctcgccggcgtcgtcgccggagttgccctctacaacaagatccaggccgacatcccggcgcacaggggcctcggcatcttcatcctcgtcctcggcatccttcaggtcgtcacccattgcacgcatcacatctctctgctccgttcttgcagaaagcaagcacggtcactgcatgaacagaacagatgaactgatgatgatgatgattttctgaaatgtttcagattttggcgttcttcctgcggccgaacacggactccaagtaccggaagtattggaactggtaccaccactggtcgggcaggctggtgctgttcttcgccgccgtcaacatcgtgctcggtatccacgtcggcggcggggacaactcgtggaagatcgggtacggcttcaacctcgccatcatcctcctcgccgtcatcgggctggagttcatgctgcggacgaggtggtccaaggaaagcgagcccacgccgacgtactaggcgcggcgccggcggccgccgttgatgccgcgaacccactattttttggttttttttttgtgcccttgggcgctggactgtgtcttagctctggtggtgttgtgattgttttttggccttctgtgctgttcgattttctgcatgttgctgtcaagtgaaactgtgaaaaagtgtaagcgtgagcaggtgcaattgcactatgccacaattgat</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0556400, RefSeq:Os05g0556400