Os05g0556700

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Revision as of 10:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0556700| Description = Similar to Cct2-prov protein| Version = NM_001062817.1 GI:115465364 GeneID:4339570| Length = 1599 bp| Definition = ...")
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Gene Name

Os05g0556700

Description

Similar to Cct2-prov protein

Version

NM_001062817.1 GI:115465364 GeneID:4339570

Length

1599 bp

Definition

Oryza sativa Japonica Group Os05g0556700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27768307..27769905

Sequence Coding Region

27768309..27768346,27768584..27769069,27769161..27769476,27769557..27769703

Expression

GEO Profiles:Os05g0556700

Genome Context

<gbrowseImage1> name=NC_008398:27768307..27769905 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:27768307..27769905 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>actggagggtctctaaaggactcctttttggatgaagggttcattctagacaagaaaatcggtcttggccaaccgaagaggattgaaaacgccaagattttggttgcaaatactgctatggacaccgacaaagttaagatatatggagcacgtgtacgggttgattcaatggctaaggttgctgaaattgaagctgctgaaaagcaaaaaatgagagaaaaagtgcaaaagatcataggtcatggaatcaactgtttcgttaacaggcagttgatctacaacttccctgaggaactctttgcagatgctggcatactggcaatcgagcatgctgattttgagggcattgagcggcttgctcttgtcactggtggtgacatcgcctccacttttgataacccggagtctgtcaaacttggtcattgcaaggtcattgaagagattatgattggggaggacaggctgattcatttctctggggttgaaatggggcaagcctgtactattgtcctcagaggagcaagtgagcatgtgcttgatgaagcagagaggtccctgcacgatgccttatgtgtgctttcacaaacagtgaacgacacccgtgtgttatatggtggtggatggcctgagatggttatggccaaagaagtagatggactggcgagaaagacacctgggaagaagtcccatgctatcgaagccttctcgcgcgctcttcagtccattccaaccatcatcgctgacaatgctggtctggatagcgctgatctgatctctcagctcagagcagagcatcacaaagagcagagcactgctggaattgatgtcatttctggcggcgttggagacatggaaaagctggggatatcagagtcgtttaaggcgaagcaagctgttcttatgtctgctaccgaggcagcggagatgattctcagggtcgatgagatcgtcacttgtgctccacggagaagggaggacaggatgtga</cdnaseq>

Protein Sequence

<aaseq>TGGSLKDSFLDEGFILDKKIGLGQPKRIENAKILVANTAMDTDK VKIYGARVRVDSMAKVAEIEAAEKQKMREKVQKIIGHGINCFVNRQLIYNFPEELFAD AGILAIEHADFEGIERLALVTGGDIASTFDNPESVKLGHCKVIEEIMIGEDRLIHFSG VEMGQACTIVLRGASEHVLDEAERSLHDALCVLSQTVNDTRVLYGGGWPEMVMAKEVD GLARKTPGKKSHAIEAFSRALQSIPTIIADNAGLDSADLISQLRAEHHKEQSTAGIDV ISGGVGDMEKLGISESFKAKQAVLMSATEAAEMILRVDEIVTCAPRRREDRM</aaseq>

Gene Sequence

<dnaseqindica>3..40#278..763#855..1170#1251..1397#aaactggagggtctctaaaggactcctttttggatgaagggtatgtcagaattgtgtttgacaatatttagggagaaaatttccttcagtatccaacctttattgaccccaaacatctgttaggttcaagaataaagtagtacatgatatttattcattgcagactaattaaattttgaaattatgtaaatcatcatatgttggaagcagccatgagcagatcaaactgaagtcctgctcttgaggtggcaatttcatgattttttttcttttgtaggttcattctagacaagaaaatcggtcttggccaaccgaagaggattgaaaacgccaagattttggttgcaaatactgctatggacaccgacaaagttaagatatatggagcacgtgtacgggttgattcaatggctaaggttgctgaaattgaagctgctgaaaagcaaaaaatgagagaaaaagtgcaaaagatcataggtcatggaatcaactgtttcgttaacaggcagttgatctacaacttccctgaggaactctttgcagatgctggcatactggcaatcgagcatgctgattttgagggcattgagcggcttgctcttgtcactggtggtgacatcgcctccacttttgataacccggagtctgtcaaacttggtcattgcaaggtcattgaagagattatgattggggaggacaggctgattcatttctctggggttgaaatggggcaagcctgtactattgtcctcagaggagcaaggtatgctcatgcctatagttggactcttttttctttacatttatctatattccatcttgagcttgtgttgactgtgtgcttttacctgcagtgagcatgtgcttgatgaagcagagaggtccctgcacgatgccttatgtgtgctttcacaaacagtgaacgacacccgtgtgttatatggtggtggatggcctgagatggttatggccaaagaagtagatggactggcgagaaagacacctgggaagaagtcccatgctatcgaagccttctcgcgcgctcttcagtccattccaaccatcatcgctgacaatgctggtctggatagcgctgatctgatctctcagctcagagcagagcatcacaaagagcagagcactgctggaattgatgtcatttctggcggcgtaagtttgctagtgcatatcagaagttgcatttacatttgttctaggggttggagctgatactaagacttcttccgcaggttggagacatggaaaagctggggatatcagagtcgtttaaggcgaagcaagctgttcttatgtctgctaccgaggcagcggagatgattctcagggtcgatgagatcgtcacttgtgctccacggagaagggaggacaggatgtgatgtgtctgatatttgtgttctaatctgagggtgtttgtttttttgaagtgttttgtatcaggtcgtcttgtagacacatatgggacggccgggtctgtattatcatgaaagctttgtcctaacagcggaacactttgaatgggattcttatttgcagctttactcatgtgcgcttggctcaaaatatgttgggtttcggtct</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0556700, RefSeq:Os05g0556700