Os05g0556800

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Revision as of 10:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0556800| Description = Protein of unknown function DUF250 domain containing protein| Version = NM_001062818.1 GI:115465366 GeneID:4339571| ...")
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Gene Name

Os05g0556800

Description

Protein of unknown function DUF250 domain containing protein

Version

NM_001062818.1 GI:115465366 GeneID:4339571

Length

1436 bp

Definition

Oryza sativa Japonica Group Os05g0556800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27771586..27773021

Sequence Coding Region

27771835..27773019

Expression

GEO Profiles:Os05g0556800

Genome Context

<gbrowseImage1> name=NC_008398:27771586..27773021 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:27771586..27773021 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>acacactcctcctcctcctcctcgccgataacgatggcaatcgccgccgccgtcgccgccgccatggcggggcctcgccggcgcaggatgctgctcctaatggcgaactacgcggcgctgctggtggggtcggtggcgtcgagcctgctgtcgaggttctacttcacgcacggcgggcggaaccggtgggtggtgacgctggtgcagtcggcggggttcccgctgctggtcgccggcgcgctcgccggcggccggccggcgtcggcgccgcggccgttcacgtggctgtcgcggcggttcctcgccgtctgcctcgtcatcggcgccctgatgggggccaacaacctgctcttcgcgtacagcacgtcgctcctccccgtgtcgacgtcgtcgctgctgctgtcgacgcagctcgcgttcacgctggtgctcgccgtcgtcatcgtccgccacccggtcaccttcgtgaacctcaatgccgtcgtgctgctgacgctcagctcggtgctcctcgcgctccggtcgggggactccggtgagacggcggagggcggcgtcggcggcggcggcaggaagagctacctcgtcgggttcgtcgtcacgctgggcgccgcggggctcttctcggcgtacctgccggtgatggagctggtgtaccgcgaggccgtctccggggggttcgtcctggccgtggaggtgcaggcggtgatgcaggcgatggcgtcgctcatcgcggcggtggggctggcggcgtcgggcggcgtggcggacgacgtgtccggctgggtggacggcgggtcctcgccggcggtgtactgggcggtggtggcgacgctggtgctgacgtggcaggcgtgcttcatgggcaccgccggcgtgatctacctcacctcgtcgctccacagcggcgtctgcatggccgccgtgctcaccctcaacgtactcggcggcgtcgccgtgttcggcgacccgttcggcgcggagaaggccctcgccaccgcgctctgcgcctggggcttctcctcctacctctacggcgagtacgccaaggccaagaaggtcgccgcggcggcggcggttgcggcggcggaggaggaggagagcgcttccgacggcgagggcagcgtccacaagagcctgacaggtggcggcgcggccggaggacacgtcgagacggcagtttga</cdnaseq>

Protein Sequence

<aaseq>THSSSSSSPITMAIAAAVAAAMAGPRRRRMLLLMANYAALLVGS VASSLLSRFYFTHGGRNRWVVTLVQSAGFPLLVAGALAGGRPASAPRPFTWLSRRFLA VCLVIGALMGANNLLFAYSTSLLPVSTSSLLLSTQLAFTLVLAVVIVRHPVTFVNLNA VVLLTLSSVLLALRSGDSGETAEGGVGGGGRKSYLVGFVVTLGAAGLFSAYLPVMELV YREAVSGGFVLAVEVQAVMQAMASLIAAVGLAASGGVADDVSGWVDGGSSPAVYWAVV ATLVLTWQACFMGTAGVIYLTSSLHSGVCMAAVLTLNVLGGVAVFGDPFGAEKALATA LCAWGFSSYLYGEYAKAKKVAAAAAVAAAEEEESASDGEGSVHKSLTGGGAAGGHVET AV</aaseq>

Gene Sequence

<dnaseqindica>3..1187#ctacacactcctcctcctcctcctcgccgataacgatggcaatcgccgccgccgtcgccgccgccatggcggggcctcgccggcgcaggatgctgctcctaatggcgaactacgcggcgctgctggtggggtcggtggcgtcgagcctgctgtcgaggttctacttcacgcacggcgggcggaaccggtgggtggtgacgctggtgcagtcggcggggttcccgctgctggtcgccggcgcgctcgccggcggccggccggcgtcggcgccgcggccgttcacgtggctgtcgcggcggttcctcgccgtctgcctcgtcatcggcgccctgatgggggccaacaacctgctcttcgcgtacagcacgtcgctcctccccgtgtcgacgtcgtcgctgctgctgtcgacgcagctcgcgttcacgctggtgctcgccgtcgtcatcgtccgccacccggtcaccttcgtgaacctcaatgccgtcgtgctgctgacgctcagctcggtgctcctcgcgctccggtcgggggactccggtgagacggcggagggcggcgtcggcggcggcggcaggaagagctacctcgtcgggttcgtcgtcacgctgggcgccgcggggctcttctcggcgtacctgccggtgatggagctggtgtaccgcgaggccgtctccggggggttcgtcctggccgtggaggtgcaggcggtgatgcaggcgatggcgtcgctcatcgcggcggtggggctggcggcgtcgggcggcgtggcggacgacgtgtccggctgggtggacggcgggtcctcgccggcggtgtactgggcggtggtggcgacgctggtgctgacgtggcaggcgtgcttcatgggcaccgccggcgtgatctacctcacctcgtcgctccacagcggcgtctgcatggccgccgtgctcaccctcaacgtactcggcggcgtcgccgtgttcggcgacccgttcggcgcggagaaggccctcgccaccgcgctctgcgcctggggcttctcctcctacctctacggcgagtacgccaaggccaagaaggtcgccgcggcggcggcggttgcggcggcggaggaggaggagagcgcttccgacggcgagggcagcgtccacaagagcctgacaggtggcggcgcggccggaggacacgtcgagacggcagtttgaagagaacgagccatgtgatgtgatgggctgggccgcgcgcgcggaaacgaagggagggagcgagcggtgcaacaaaaggaaaagaaactgaagcaacaaaaagaaattggcaggatgcgatgccattaggtgtagttgagtcatgcatgttgcatggattaggcttacttgcaagggacaaaaattgttgcatggatcagtagaccgactgtctgtgcttgtaactgatgggttagcttgatttgttca</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0556800, RefSeq:Os05g0556800