Os05g0557000

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Revision as of 10:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0557000| Description = Similar to 60S ribosomal protein L37a| Version = NM_001062820.1 GI:115465370 GeneID:4339573| Length = 2043 bp| Defi...")
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Gene Name

Os05g0557000

Description

Similar to 60S ribosomal protein L37a

Version

NM_001062820.1 GI:115465370 GeneID:4339573

Length

2043 bp

Definition

Oryza sativa Japonica Group Os05g0557000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27781333..27783375

Sequence Coding Region

27781414..27781416,27782245..27782284,27782383..27782471,27782971..27783053,27783125..27783188

Expression

GEO Profiles:Os05g0557000

Genome Context

<gbrowseImage1> name=NC_008398:27781333..27783375 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:27781333..27783375 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgaagcgcaccaagaaggcaggaatcgttggcaaatatggtaccaggtatggtgccagtttgcgtaagcagatcaagaagatggaggtttcccagcactccaagtacttctgcgagttctgtggcaagtttgctgtgaagaggaaagcagttggaatctggggatgcaaggactgtggcaaggtcaaggctggtggtgcctacaccatgaacactgccagtgcggtcacggtcagaagcacaatccgtcgcctgagggagcagacagaagcctga</cdnaseq>

Protein Sequence

<aaseq>MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK FAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTEA</aaseq>

Gene Sequence

<dnaseqindica>82..84#913..952#1051..1139#1639..1721#1793..1856#agttcgctcgcagccgccgccgccgcctctctcactgccgccgccgccgcctgcctcgtactccaactcttcggcgactagatggtacgatctcctctccccgtacctacgtcctctccaatccttcgcgtgcactcggatttccccttcgtatcaactcgttgtctcgctgtgctgattgaatcatcctgacccttttcggtttagttgtagctttgttcagcgcaatgggaatatgtcgttccggttagattttaggaggaatttgctgttcctgtttgattttaggaggttttggtttgtgccggtagaatgtcctcgttgggagtcgtgtgagatcttgctgttgacgctttttcgtggccaacacaagatcacctaacgatttcgtggtacaaacacttgcgtgatgcttccgttgtatttcgcccttgtagttcttgatacgaattctatcactgtgagatcccccgctgtattattacctgatgaactggtgttgccgtcttcctgttgttaaagtgacaatttctgccttccaaattattagttggagtgggttgattaataaagtgcatgatcattacctcaaattatgcaccattaaacactttagcttgttaagcttcctttgaggccaactgccatgtgccgatgtttccattggtactgcatgatcagttaatatactgttttggataatacttatagtagagtggggtttcttattagcacaagttctttctgctctactgtggaaatgtcatgtgttttaagtatatacaagttatactttccaagtatttttagtacagagtggggttgtctgcaatcatcaccatacgtaaaagtggactgtaccattaactatgcttgtgctctgtttaagtcttgtttgtgatgtttgtgcagacgaagcgcaccaagaaggcaggaatcgttggcaaatatggtaatgacattgtaactgtgcacactgttagttcatagcatcatgaatgtctgatcactcatgttaacatatgcccttgtaatatcaatgttatacaggtaccaggtatggtgccagtttgcgtaagcagatcaagaagatggaggtttcccagcactccaagtacttctgcgagttctgtggcaaggtaattcttccaaggatattaatgattacttgtcagcaagatgctttaagtgtctttgggtttgcttgactgtattatgatgtgtcatgcttgttgtcatatgactatcctaaaagcagcacaatattcaaaataatcatatctggttttgttctgctgtggtttgtttcttgcatgacctctggttagagggaacttgaatagcaccataccttcaaatttgcgtagtgctgaccatgctactctacatcacttgcttaatatttagttattagttttttaggttaggttaagtattcctctttgcaattcatttcaactatctagataatcaaacagtaaataacagcctctgattatgcaatatgctcactatctacaatgttttccctcttaatcagtgtgttgttctgtattacctttgttttctattttatctgcattgtttctgtataatcgcttcttgctaaccatgtctactgctattcctgattcacagtttgctgtgaagaggaaagcagttggaatctggggatgcaaggactgtggcaaggtcaaggctggtggtgcctacaccatgaagtaagtgtggtgttttgtaaggtgcaccgtccactattatgtttcctaactttgttattacgctcttccagcactgccagtgcggtcacggtcagaagcacaatccgtcgcctgagggagcagacagaagcctgatcaggatctgtttgagaaagtgttcttggagttctatcaagactggtgaagttgccattttgcatatttagctaaaaagagaaatctagaatgttatctatctatttgtagatggaatatctgtccgcattgtgtacttgatttcccaagctaattttatcaaatgcgagcacttgatttgcgatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0557000, RefSeq:Os05g0557000