Os05g0558000

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Revision as of 10:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0558000| Description = Ribosomal protein L1 family protein| Version = NM_001062829.1 GI:115465388 GeneID:4339582| Length = 1800 bp| Defini...")
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Gene Name

Os05g0558000

Description

Ribosomal protein L1 family protein

Version

NM_001062829.1 GI:115465388 GeneID:4339582

Length

1800 bp

Definition

Oryza sativa Japonica Group Os05g0558000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27846439..27848238

Sequence Coding Region

27846925..27848172

Expression

GEO Profiles:Os05g0558000

Genome Context

<gbrowseImage1> name=NC_008398:27846439..27848238 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:27846439..27848238 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcggcggcgcagcagcagaagcacgaggtggaccgggcgacggtggccggagccgtggccgcgctgttcaagtggatgcgcgcgcgcgcggcggaggctccaccgaacctcctcgccgacgagcgcgacgacctcctgctcctccagctctccctccgccgcatcccgccctcaccgacgaccaagccgcgcctccttccgctcccccaccccgtcatcgtccccggcgagtcggcctccatctgcgtcatctccgacgaccgccccaagtcccgctccccggccgcctccgacctgctcgacgcgtccaggtcccaccacctccccgtctccgaggtcatcccgctctccgccctccgcaccgactaccgcccgtacgagtcccgccgccgcctcgccgcctcccacgacctcttcatcgccgaccgcgccgtcctcccgctgctcccgcgcgtcctcggcaaggccttctactccaccaagaaggcccccgtcgccgtcgacttcgcccgcaccgggtggctggagcaggtccgcaaggtgatgaactcgacttttctctacctgcggacgggcacctgctctgggatcaaggttgggaggctggacatgaaggaagaggacaccgtggagaatgtgatggcggcggtggaggcggccgtggagaatgtgcccaagaagtgggcgaatgtgaggtctctccatttgaaggctgtggattcagttgcattaccaatttaccaggctgtgccggagttgggcatgaagatcgaggtccggtttgcacaattggagggagaagtcggttccggggaggttatcgatgcttcggaagctggagctgcactgaagggtgtcggcaagaagaaggcgaagaaggcattgaaacatgtggaagaagagaatgctggtgaggaagctgcacaggagagtggcaagaggaagaggggtaagaagcaactagctgaggatttgatggagcaagacatccaagatgtgagtgagaaaaggaagaaggtgaaggagggcacccctgctgccgaaacgccgaagattagcaagaagggtaaggagaagagcaagcgtgcattggacaaggagggggaggatgcaagtgtggaggaagccagtaacaagaaaaagaagggcaagaaagaggtggtgagtgatgttggggagaagaacagcaaggtgaagaaatcaaatggtgataaggagaagagaaggaccagattaagggtatag</cdnaseq>

Protein Sequence

<aaseq>MSAAQQQKHEVDRATVAGAVAALFKWMRARAAEAPPNLLADERD DLLLLQLSLRRIPPSPTTKPRLLPLPHPVIVPGESASICVISDDRPKSRSPAASDLLD ASRSHHLPVSEVIPLSALRTDYRPYESRRRLAASHDLFIADRAVLPLLPRVLGKAFYS TKKAPVAVDFARTGWLEQVRKVMNSTFLYLRTGTCSGIKVGRLDMKEEDTVENVMAAV EAAVENVPKKWANVRSLHLKAVDSVALPIYQAVPELGMKIEVRFAQLEGEVGSGEVID ASEAGAALKGVGKKKAKKALKHVEEENAGEEAAQESGKRKRGKKQLAEDLMEQDIQDV SEKRKKVKEGTPAAETPKISKKGKEKSKRALDKEGEDASVEEASNKKKKGKKEVVSDV GEKNSKVKKSNGDKEKRRTRLRV</aaseq>

Gene Sequence

<dnaseqindica>67..1314#cgccgccacacctccacctctcctcttccttcccctcgccgccgccgccttctcgtcgacgcagccatgtcggcggcgcagcagcagaagcacgaggtggaccgggcgacggtggccggagccgtggccgcgctgttcaagtggatgcgcgcgcgcgcggcggaggctccaccgaacctcctcgccgacgagcgcgacgacctcctgctcctccagctctccctccgccgcatcccgccctcaccgacgaccaagccgcgcctccttccgctcccccaccccgtcatcgtccccggcgagtcggcctccatctgcgtcatctccgacgaccgccccaagtcccgctccccggccgcctccgacctgctcgacgcgtccaggtcccaccacctccccgtctccgaggtcatcccgctctccgccctccgcaccgactaccgcccgtacgagtcccgccgccgcctcgccgcctcccacgacctcttcatcgccgaccgcgccgtcctcccgctgctcccgcgcgtcctcggcaaggccttctactccaccaagaaggcccccgtcgccgtcgacttcgcccgcaccgggtggctggagcaggtccgcaaggtgatgaactcgacttttctctacctgcggacgggcacctgctctgggatcaaggttgggaggctggacatgaaggaagaggacaccgtggagaatgtgatggcggcggtggaggcggccgtggagaatgtgcccaagaagtgggcgaatgtgaggtctctccatttgaaggctgtggattcagttgcattaccaatttaccaggctgtgccggagttgggcatgaagatcgaggtccggtttgcacaattggagggagaagtcggttccggggaggttatcgatgcttcggaagctggagctgcactgaagggtgtcggcaagaagaaggcgaagaaggcattgaaacatgtggaagaagagaatgctggtgaggaagctgcacaggagagtggcaagaggaagaggggtaagaagcaactagctgaggatttgatggagcaagacatccaagatgtgagtgagaaaaggaagaaggtgaaggagggcacccctgctgccgaaacgccgaagattagcaagaagggtaaggagaagagcaagcgtgcattggacaaggagggggaggatgcaagtgtggaggaagccagtaacaagaaaaagaagggcaagaaagaggtggtgagtgatgttggggagaagaacagcaaggtgaagaaatcaaatggtgataaggagaagagaaggaccagattaagggtataggttttattctctatctcctgagagatgcttgtgatattggttgatcgacagtgtcgtgatgttcatcgtgttgattagctgggctaatctgatagtttatctgctggcagaagaactatgccactgtcaagtttttggtagccttgtagtactttataagatctccaatctaccgcagaatgttctacttttgtgtgcactagaggtgtcttcaaaagttgtatcttttgtttttgttagcttactagcctgactgcctgagccttcaggttaaagatagtatggtaaaactgtttctggcttcatgtggttcgcatcaattttgtgatcatctaagaatatgtctcagttgttgtcttccctgaattactcatctagcatatgctgtacacttggaacccagtttcaataggagctgggctgggccatttgtactctcttactttgcatgacttgtgaggcgatggaatggaattgaattgctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0558000, RefSeq:Os05g0558000