Os05g0560300

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Revision as of 10:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0560300| Description = Protein kinase-like domain containing protein| Version = NM_001062842.1 GI:115465414 GeneID:4339596| Length = 2797 b...")
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Gene Name

Os05g0560300

Description

Protein kinase-like domain containing protein

Version

NM_001062842.1 GI:115465414 GeneID:4339596

Length

2797 bp

Definition

Oryza sativa Japonica Group Os05g0560300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27968193..27970989

Sequence Coding Region

27968362..27968625,27968743..27968928,27969139..27969293,27969394..27969526,27969624..27969814
,27969984..27970419

Expression

GEO Profiles:Os05g0560300

Genome Context

<gbrowseImage1> name=NC_008398:27968193..27970989 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:27968193..27970989 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggattcatcgagttctttcgtgctcgtggtgctgattctccaagctgtcgtgatcggttgctcctcactggacgagctacccgttcagcttagcaaccggaggctacttcatgacagaaatcacgctgctctactctacaaagatcatttcccaacagttggaaacatgacgtttccaacatctcatcaactgcaaaatgatccaaattacaagcctctagatagttcatcccaccctgccgaggcttctgcaaataaaggatcaagcaaaggattcaagaagtggctgtatatagttgtgattccagtggctggtttgattatgcttgctggcatggcatggatgttcttgccatgccgcaagaaatccgttgcgactattggcccttggaggactggactcagtggccagctgcagaaggcatttgtgtcaggagtgccccaattacagcgtccagaactggagcgtgcttgtgaggacttcagtaatattgtggcaagtcatccatactacactgtctacaagggaaccttatcatccggtgttgagatcgccgttgtatcgacaacgattaaatccagcaaagattggtcaaagcactgtgaagattgtttcaggaaaaagatagagtcgctctcacgaataaatcataagaatttcatcaatctgctggggttttgtgaggaggaagaacctttcacgagggtgatggtgttcgaatacgcaccaaatgggacgctttatgagaatctccatgatgaggcctttgatcacatcgactggagaagtagaatgagaataatcatgggaatagcttactgtattcagcacatgcatgagctcaaccctgccaacgtgcaccctgatctgcattcaagtgcagtatttctttctgaagattgtgctgcaaagattgcagacttgagtgtttggcaggaagtggtttccgacggcaaaaagtcgacagcgaataatgatcatcatgaaccaatatctgctagactggcagggaacgtttacagttttggcatactgcttcttgaaatcatctcagggaaacccccttactctgaaaacgagggctccctggcgaatctggctttggggtgcattatcaaaggtcggagtatagcctccatgcttgattcagtactagagtcacacaaagaaaatgagctagatgtgatctgtcagataatcatggaatgcatccagagtgacccaacgaagagaccaggcatgagggagatcaccacaaggctgagagagaccatagccatttcgccggatgcagcaacgcccagattgtctccgctctggtgggctgaagtggaggtcctctcaccagtggagccaaggtag</cdnaseq>

Protein Sequence

<aaseq>MDSSSSFVLVVLILQAVVIGCSSLDELPVQLSNRRLLHDRNHAA LLYKDHFPTVGNMTFPTSHQLQNDPNYKPLDSSSHPAEASANKGSSKGFKKWLYIVVI PVAGLIMLAGMAWMFLPCRKKSVATIGPWRTGLSGQLQKAFVSGVPQLQRPELERACE DFSNIVASHPYYTVYKGTLSSGVEIAVVSTTIKSSKDWSKHCEDCFRKKIESLSRINH KNFINLLGFCEEEEPFTRVMVFEYAPNGTLYENLHDEAFDHIDWRSRMRIIMGIAYCI QHMHELNPANVHPDLHSSAVFLSEDCAAKIADLSVWQEVVSDGKKSTANNDHHEPISA RLAGNVYSFGILLLEIISGKPPYSENEGSLANLALGCIIKGRSIASMLDSVLESHKEN ELDVICQIIMECIQSDPTKRPGMREITTRLRETIAISPDAATPRLSPLWWAEVEVLSP VEPR</aaseq>

Gene Sequence

<dnaseqindica>2365..2628#2062..2247#1697..1851#1464..1596#1176..1366#571..1006#agtagtctccgtcttcgtcctcttccttcttgtttaataatccctgcattaactgatcaacacaaccgagatgtttgacaaagagagaagaatacaagggaatgcagtgaaccaagagttttacccattcctcctgtatccagtttagtcgttgcagaaaaatctcccccttttttttttctttatctgaagatttgctcctggttcttcaactactaccaagaatcgagctcctgttgcttcctctagcctctgtctagtctgaagcctgaacccttgcatgctccagtttctgcactgtgtgagcagaattatttctgaagtctgaacagcagccaagcaaaaggtatgcgctttcaattgctttcgaggtgatgaagtatcttcagttccctatctgtttctgaaactgaggttgttctttgcctgatcttggcagaaggcatctgacagtaagatatgaacacctgtgtttcaggtgaatttggctgatgattctgcccctgtgttctgatttattcaagacactagcaactgaatcatcaggtgttggtcgcgaatatcccagtgatggattcatcgagttctttcgtgctcgtggtgctgattctccaagctgtcgtgatcggttgctcctcactggacgagctacccgttcagcttagcaaccggaggctacttcatgacagaaatcacgctgctctactctacaaagatcatttcccaacagttggaaacatgacgtttccaacatctcatcaactgcaaaatgatccaaattacaagcctctagatagttcatcccaccctgccgaggcttctgcaaataaaggatcaagcaaaggattcaagaagtggctgtatatagttgtgattccagtggctggtttgattatgcttgctggcatggcatggatgttcttgccatgccgcaagaaatccgttgcgactattggcccttggaggactggactcagtggccagctgcagaaggcatttgtgtcaggtaatactgcaatatttgccattttgatttgtaatattttcttatattgttctgttacatcctattcttataacggtaagttcttgactgtgttcaagtctggttttcagatcaaatattcatgttgtgtttctggttttcactgtgttctgatctgaatgtgcttcaggagtgccccaattacagcgtccagaactggagcgtgcttgtgaggacttcagtaatattgtggcaagtcatccatactacactgtctacaagggaaccttatcatccggtgttgagatcgccgttgtatcgacaacgattaaatccagcaaagattggtcaaagcactgtgaagattgtttcaggaaaaaggtagtcataatatgtgtactagatcctcaactaatccttttgcagaattgcattagcatgaaaaaatttaccttttttttcccttgtgaacaagcagatagagtcgctctcacgaataaatcataagaatttcatcaatctgctggggttttgtgaggaggaagaacctttcacgagggtgatggtgttcgaatacgcaccaaatgggacgctttatgagaatctccatggtaaatactatgtgaaagttattctcattgttgcaatgaggaataccaattttttttcttcacattcaagtgataacatgctggtaaattatttgtgcagatgaggcctttgatcacatcgactggagaagtagaatgagaataatcatgggaatagcttactgtattcagcacatgcatgagctcaaccctgccaacgtgcaccctgatctgcattcaagtgcagtatttctttctgaagattgtgctgcaaaggtacatatggtctaactaaatccttgttatgccttatggtttatcaagaattaggcatcttagccatattcagttgctatggtttcagtagttcttttaatgtccttctgatgtgaaggaggtttagagaaaaacgcagtttcagtacccaactttattcagtactcagtaaagtacagtttgatgctaaaatctgtatcctttcttcagattgcagacttgagtgtttggcaggaagtggtttccgacggcaaaaagtcgacagcgaataatgatcatcatgaaccaatatctgctagactggcagggaacgtttacagttttggcatactgcttcttgaaatcatctcagggaaacccccttactctgaaaacgagggctccctggcgaatctggtaatcacagcagcctgcaaagtcaaatgcttcaacagtttaacttacacaaaagaaatccaattcaacatcagattaaagaaaataaaactgttttttatttttcttatcttacaggctttggggtgcattatcaaaggtcggagtatagcctccatgcttgattcagtactagagtcacacaaagaaaatgagctagatgtgatctgtcagataatcatggaatgcatccagagtgacccaacgaagagaccaggcatgagggagatcaccacaaggctgagagagaccatagccatttcgccggatgcagcaacgcccagattgtctccgctctggtgggctgaagtggaggtcctctcaccagtggagccaaggtagaaacaatgataaatgtgcttctgaaaaaccaacatcctgcaggatgacgatcttgctgtgcatactgctgttcgtgcaacctttaccttgtgcaactccctgcccatgtttgatactgcccttgtgcaactctgctgcaaatgtcaaagatgagtactttctgtgtgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0560300, RefSeq:Os05g0560300