Os05g0561600

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Revision as of 10:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0561600| Description = Protein of unknown function DUF1421 family protein| Version = NM_001062850.2 GI:297604903 GeneID:4339604| Length = 3...")
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Gene Name

Os05g0561600

Description

Protein of unknown function DUF1421 family protein

Version

NM_001062850.2 GI:297604903 GeneID:4339604

Length

3879 bp

Definition

Oryza sativa Japonica Group Os05g0561600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28025673..28029551

Sequence Coding Region

28027991..28029187

Expression

GEO Profiles:Os05g0561600

Genome Context

<gbrowseImage1> name=NC_008398:28025673..28029551 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:28025673..28029551 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cactatctttcttgccaggttcaaaactctgtacaggtgctgcaggataagcaagagcttgctgaaacccagaaggaactaactaaacttcaaatattacatgaggaatctgcacagaaaagcgaaggtactgctccatcagttcttatgacaaaggaaattgacggcagcatgccagttgcaaaacatgagcttgcccttgtgcctctgcatcaagtaaatgctgcccaatctcctgctatgcaattccaaagttgcaatgggcttgttctgcagcaactggtcccagtctcattgagcactcaacaagaccagcagcacatgaaccaagccaccttgtactgtatgcaaacccaagctcatgttgagcacaggcaggcccaaccatttcaacctgcacctcaacctgtgcagcgacatacccagaatacgccacagactgtagttgaggcacaacaggtgacaagtcaggccccagacttctacattcaacctcagcagcaatgggcacatcaaactggccagcaagttcaccaggcaaggcagccacagccacaggttgtgcaacagcaacattacaacaatattcagcaagttccagcacagatagttcaaatgcaaacttcttctccacaggctcaaagtgcaccacatgtcacactgttgtaccctccttatggatctcaacaacctgcctgtgctaatagtgagccacgctcgcgaagcatggctatgcagccttcctactctacaatttcctcgtcccaaaggaatcatcatgaagtcgctcctgtttatgtgcaaagcaacacaatttcagtcccactggctgagcatagcatccagtctcagcagccaccgcaacttcaatcgtttggtaatggctcatttaaaccaagcaaggtcagcctacatggtgttgcctcatatacagtacaggggaatgcccaggcctataacactgcttatggaaatccgtccaacaatgctgctactgttgttgctgtccttcctcaacaagcccagtctagtgctcccatggtgcttcatcatttaggaccacagtctctgcagaatcatccaatagacatggttgaaaaggttgctcgtatgggttactttaaggatcaagctgagagcatggcacttcgaatggctactgctggacagaatgtagagttcaaacacctcgcttga</cdnaseq>

Protein Sequence

<aaseq>HYLSCQVQNSVQVLQDKQELAETQKELTKLQILHEESAQKSEGT APSVLMTKEIDGSMPVAKHELALVPLHQVNAAQSPAMQFQSCNGLVLQQLVPVSLSTQ QDQQHMNQATLYCMQTQAHVEHRQAQPFQPAPQPVQRHTQNTPQTVVEAQQVTSQAPD FYIQPQQQWAHQTGQQVHQARQPQPQVVQQQHYNNIQQVPAQIVQMQTSSPQAQSAPH VTLLYPPYGSQQPACANSEPRSRSMAMQPSYSTISSSQRNHHEVAPVYVQSNTISVPL AEHSIQSQQPPQLQSFGNGSFKPSKVSLHGVASYTVQGNAQAYNTAYGNPSNNAATVV AVLPQQAQSSAPMVLHHLGPQSLQNHPIDMVEKVARMGYFKDQAESMALRMATAGQNV EFKHLA</aaseq>

Gene Sequence

<dnaseqindica>2319..3515#gcttccactcctccccacccacgcctcctcctcctcgcttccccgaccatcgcatcgcggcgcagcgcagcggaggaaaccctagcgcagcagcaagccaccgccgccgcatggcgtccccggcgcggcccgccgcagcctccgtctccggcgccttcggcctctccgccgacccggcgcggtgctcctttgaccagacgctccgccgagaggtgagcgagatctctttgtgttcggtgatgttttgcttcgttctgggtgtgtgttggtgagaacggtggctcgactctcgccttgggggggggggggggtgcagctttttgctgtctgcttctgatttcgtggagatgcggggaaaggttgggagttctcgtctgttgtttgtgcgtagcggtggatctgcgagctcgtcaaccatttcgatgatgtgcgaggttgcacactgttctatgtgatttgttctgaccgatttgaatttcagaaatgaacgagacagcccacttttcgttttcatgtggagatttcgtcttaattttggccgatttgtgggatttgcgggtgtttcgttacgactagggtttcactgttccttgtgcaaaacggtagctgcaaatttttgagggatttgtcctgtgtgcttgctgcggatatgctacttttgatttacttctcatcgtgtttataatcaatcttaggtgttgtcgtgacatatcacttctgttatcttaagatttttttggtcgttctactgttacatcttccgaatttgcttcttctgctgtttagatttaaacacgccgggaagtaatcattcgttgggtgtgttagctatcaatatacatttcttgtaacttgtaagttgtaaccagatgaagatctggagtcaacttggtgatgttcaccctttatcaacacatatgaacgtattatatttcttagcttaaatcacgtttgctaggcttttggcaaaatctatatagtttttcttttccttgccatgattctataggctcaaaacatctggtccttagcatattttcctttcttcaataaagcaggatttccaggacaaccggctgctgaggtcacttgttaatatccatgaacaagaaacttattccagagaaataataacggaagctatagagagctgcatgaagaaacaagcagacaacttggtgaatacactggatgtcatcagtgggaggctatcacagttggagctgtattgctataagctggaaaggtcaattggagaattacgaagtgatgtgatggattaccatggtgaagcaaatattaacttccgttgcctcgaaaagcatgtgaaagaggtatgttgtgctttacattgacattttgataagcagtaactgagaattgagtagcaaagtggtgtggactgaatttttgtgctctaatagcagcaccttaactatgcttagctaaactattgtctattccatttggacttacaaaaatgttgggcaaattattattctatactaatgatgaatacataagccaatgggaatgtaagaggatgactatagcacaaacctctagttacataacttttgtatttttcctcctaggatttccagctccttttaggatatttagttaatggtgaaaaaggtgtattgtaaagtgcataatttacatgtggatttgattttctctaaactaaagcatatttgctaattcttccatttatacacgggtttttaaatgagcaccaaagttgggcaaatggttaggtccatggagatggagatcacacatgttggtttgaagatttttatatgaaatgaggggtgggaggatggatgtagtgtaaagcactaaagcatcaccaccttcttcaattgaaaattcaatgtaacaatacatgcatatatatttgactacagggcacatgatatatttcgcaattcagcacattttgcaagtaaaacaggccattctagaacaacacaaacacatccacctatggttagtgcaagaattcatgatgtgataagtttcagaatgagcttaagtttaggaacatgctaccatctgtctagattcatagtactaggatgtgtcacatcccgttctaggtttgatttttgtgggacggagggagtacttgattgcttggcttgcttgctctagataatttttcaagtagaactttgttctgtagatattgatgcatagacagccaaccgggataaactgcatagctaatatttaacatgaattttcccacttcctcttgcaattgtcttcttaaaaaaaaaaccaaactacttatcataactcataactagcactatctttcttgccaggttcaaaactctgtacaggtgctgcaggataagcaagagcttgctgaaacccagaaggaactaactaaacttcaaatattacatgaggaatctgcacagaaaagcgaaggtactgctccatcagttcttatgacaaaggaaattgacggcagcatgccagttgcaaaacatgagcttgcccttgtgcctctgcatcaagtaaatgctgcccaatctcctgctatgcaattccaaagttgcaatgggcttgttctgcagcaactggtcccagtctcattgagcactcaacaagaccagcagcacatgaaccaagccaccttgtactgtatgcaaacccaagctcatgttgagcacaggcaggcccaaccatttcaacctgcacctcaacctgtgcagcgacatacccagaatacgccacagactgtagttgaggcacaacaggtgacaagtcaggccccagacttctacattcaacctcagcagcaatgggcacatcaaactggccagcaagttcaccaggcaaggcagccacagccacaggttgtgcaacagcaacattacaacaatattcagcaagttccagcacagatagttcaaatgcaaacttcttctccacaggctcaaagtgcaccacatgtcacactgttgtaccctccttatggatctcaacaacctgcctgtgctaatagtgagccacgctcgcgaagcatggctatgcagccttcctactctacaatttcctcgtcccaaaggaatcatcatgaagtcgctcctgtttatgtgcaaagcaacacaatttcagtcccactggctgagcatagcatccagtctcagcagccaccgcaacttcaatcgtttggtaatggctcatttaaaccaagcaaggtcagcctacatggtgttgcctcatatacagtacaggggaatgcccaggcctataacactgcttatggaaatccgtccaacaatgctgctactgttgttgctgtccttcctcaacaagcccagtctagtgctcccatggtgcttcatcatttaggaccacagtctctgcagaatcatccaatagacatggttgaaaaggttgctcgtatgggttactttaaggatcaagctgagagcatggcacttcgaatggctactgctggacagaatgtagagttcaaacacctcgcttgacaagcagatctctggtggcgatgaggtggcgagtaggagaatgaacaagccagtttggaaccgctgcatgtggtttgttggcttgttcctgtgaaatattatgatatcttactatcatgggaagcttttcagctttgctaaggtatttcgtctggcatctttttaaacagccagcagattggtacatatcctgcagcttatttttttcagctggaggattgtgatgaaataatactgctagtttagttaagatgatgattgttggcatgtgtcctaccttttaatggacatatatgcttgtaaccttttgtggacttgcatacgcatgtttgcaatacgaagatatgagaaatttgttgttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0561600, RefSeq:Os05g0561600