Os05g0563500

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Revision as of 10:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0563500| Description = Conserved hypothetical protein| Version = NM_001062862.1 GI:115465454 GeneID:4339616| Length = 2475 bp| Definition ...")
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Gene Name

Os05g0563500

Description

Conserved hypothetical protein

Version

NM_001062862.1 GI:115465454 GeneID:4339616

Length

2475 bp

Definition

Oryza sativa Japonica Group Os05g0563500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28121801..28124275

Sequence Coding Region

28123625..28123863,28123955..28124027,28124113..28124184

Expression

GEO Profiles:Os05g0563500

Genome Context

<gbrowseImage1> name=NC_008398:28121801..28124275 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:28121801..28124275 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtcggtggtcaacaagctcactaacgccgccgagagggagtcgtcggaggcggaaacccttatcgcggagattcgcaaggcgatcggcgaaatgaagtccatcgccgtcgattacgagagggagaacaagtccgacaaggtgaagcagcttgaggcggcggcgctggaactggttgcttcgtgcgaagattgcacgtgctacgccgacgcgatccggaaggtgcctggggcgtaccagccatctaatcaggtgcggactctggtagccgcgatgattatttttttggtttcaggggcttattcgaattgtattggaggaatttcggctaaatggttatttgttgttttggtattgatcactgaatttgtgtcaagatga</cdnaseq>

Protein Sequence

<aaseq>MSSVVNKLTNAAERESSEAETLIAEIRKAIGEMKSIAVDYEREN KSDKVKQLEAAALELVASCEDCTCYADAIRKVPGAYQPSNQVRTLVAAMIIFLVSGAY SNCIGGISAKWLFVVLVLITEFVSR</aaseq>

Gene Sequence

<dnaseqindica>413..651#249..321#92..163#acctgacggctttctctttccctcgaaaaccaaaaccaaaaccaaatcgcgggaaagcgggcgcggcggagatcgccgccggtcgccggagatgtcgtcggtggtcaacaagctcactaacgccgccgagagggagtcgtcggaggcggaaacccttatcgcggtaagaatccccactcggctgcccgctctccgctaaacccccaaaaccctagcaatctcatcgaatccccccccaaaacccacaggagattcgcaaggcgatcggcgaaatgaagtccatcgccgtcgattacgagagggagaacaagtccgacaaggcacgcggcctctccccccacattaacctcacgcggcgttgtgccgcggaaaccctaaacccataaccaccatcgttatcctcttttgcaggtgaagcagcttgaggcggcggcgctggaactggttgcttcgtgcgaagattgcacgtgctacgccgacgcgatccggaaggtgcctggggcgtaccagccatctaatcaggtgcggactctggtagccgcgatgattatttttttggtttcaggggcttattcgaattgtattggaggaatttcggctaaatggttatttgttgttttggtattgatcactgaatttgtgtcaagatgacggatttcgaaaagctgatcgaggctgaggttaacaaggtcaaggggaactcatcaacatcagtagagaaccatctgctcattcggcagttcagagaggcagtttgggtatgttccgtggaccctttgtgttttgagagacttggcaattttctatgcggtagatcaggaattagaggaatttacaaatgttaattctcccttagtgctaatggctgttgagaacggtatggattatgtacttttttgcctatatattcactgagttagctcggtgctgaactattgctgaaaatgttacattaaagatggattgaaatgactgcaatttttagtatggtatctccaataggtcatgtttggagaaagtaaaaggtttgtgcattacttctaattattttctctctctgtaattgtgttgtcttctacagaatgttcaccatgctggccaaccaatgcctggtgatgaacaggaggatgttcttatgaccagtacccaaactagcatcttaaatgtcacgtgcccattaactgggaagcctgtaattcaattgacagagccagttcggtggtaagtgttaagcagttaaactgttaaggcatggttttgttttgtaactctaggaaatttttattatgatatgttacatatgctagatagtttccttcatggttgttcaaagaacacatactctcattttgtttttaagcacaacttaatgtcccaaaaaatatccatcattaatctgatttcacctgctaaagaccaagtttttgttggcacaaataacatgtcgcaaagccttaggattatgtttctccaattttcttttgctgcccaagttgagatcatcaggatctgtttccttctccatatggtttgcatcttgcggtaacaatggcttgtctttctgtgaaaattccatgcagtagaacaagtttgctgttgtcactgaataatcatcattgtgttcaaagtataatagtgtatagctttctgggggcagaaatagtgcggtttctaccagtacaatcctttcagccaatttgactattaggcatgattcaaactaatcattcccctgtatgtaaggtctttctacagttttactattcacataattgaattcaaatcggaaactcctactacttaatttgcttatttttctcagtcaaatggatttctcctaagttgttgcatgtagaaagcagtgtgaacatatatttgcagatattcagtttttgcgttgaactcaaggctatttgtgttgttcagtgcggattgtaggcacatatatgaaaaagttccaattatgcattacataagaaaccaaaaacctccgaagtgccctatcgcaggtaggtcatttgttcgctgcctcattgtttattttcttttcacggatgctcatttcagattgtatgttcaaccaggttgcccaagagtcttacaagtaggaagggttacctgtgattccctcctccaggttgaaatcgatgaattacgctcgtcagggccttctgctccagacgctgaaaacatagaggatttaactgacgacgaggatgacagcaatgaatgaagctctagaaaatgactgcccttttggataattattgtagctagggacaaatttaaacttttgctgttgtatttggtatgttttatggggaatgtggttgctacgtcagtctgatcatctggccctgcttagcatctgttgattctgttcccctctaaccattatttgcactacttgtagccaatgaaacatgggcagctcccacggcaagatgtgagtaaaggtccaatattgtatctgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0563500, RefSeq:Os05g0563500