Os05g0563600

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Revision as of 10:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0563600| Description = Beta-Ig-H3/fasciclin domain containing protein| Version = NM_001062863.1 GI:115465456 GeneID:4339617| Length = 1145 ...")
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Gene Name

Os05g0563600

Description

Beta-Ig-H3/fasciclin domain containing protein

Version

NM_001062863.1 GI:115465456 GeneID:4339617

Length

1145 bp

Definition

Oryza sativa Japonica Group Os05g0563600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28133346..28134490

Sequence Coding Region

28133405..28134223

Expression

GEO Profiles:Os05g0563600

Genome Context

<gbrowseImage1> name=NC_008398:28133346..28134490 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:28133346..28134490 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcctcccgcctcctcctcctcgccgcgctgctcgccacggcggcggtgctggcggcgtcgcagaagccgaaggccgccacgccgacgaaggccacgccggcgtcgcccggccccgcggcggcggcggccgacggccccgcgccgacgaacgtgacggcagtgctggagaagtccggcaagtacaccaccttcctccggctcctccacgagagccgggtggacacccagatcaacagccagctgatggacagctacaacgggctgaccatgttcgcgcccacggacgccgcgttcgcggcgctcaagccgggcacgctcaactcgctgtcgtcgcaggaccagatccagctgatgctctactgcgtgctcccgcggttctacagcctcgccatgctcaccaccctcggcggccccgtgaacacgcaggcgtccggcgccgacggcccgtacaagtacaagatcaagccgtcgaacaacaacgtcaacatctccaccggcgtcaactgggcgctgctctccaccgtcgtcagcaaggacttccccctcgccgtctactccgtcgacaaggtgccgctcccctacgagctgttcggccccaagccgcccacgcccgcgccggcgccggcgcccgcgccgtccaagtccaagaccaagaagcacaagaagtccgccgggatcgccgagccgcccgtcgccgacgacgcctccgccgacgacaccaccaagaaggccgccgcgcccgccaccgccgtctccaggtgggtcgtcgccgccgccggtgtcttggccggcgccattctcgccgccctctaa</cdnaseq>

Protein Sequence

<aaseq>MASSRLLLLAALLATAAVLAASQKPKAATPTKATPASPGPAAAA ADGPAPTNVTAVLEKSGKYTTFLRLLHESRVDTQINSQLMDSYNGLTMFAPTDAAFAA LKPGTLNSLSSQDQIQLMLYCVLPRFYSLAMLTTLGGPVNTQASGADGPYKYKIKPSN NNVNISTGVNWALLSTVVSKDFPLAVYSVDKVPLPYELFGPKPPTPAPAPAPAPSKSK TKKHKKSAGIAEPPVADDASADDTTKKAAAPATAVSRWVVAAAGVLAGAILAAL</aaseq>

Gene Sequence

<dnaseqindica>60..878#gatcgccgcctccaccaccgttcgtccgattcctcgccaccacacccacccacccaccaatggcgtcctcccgcctcctcctcctcgccgcgctgctcgccacggcggcggtgctggcggcgtcgcagaagccgaaggccgccacgccgacgaaggccacgccggcgtcgcccggccccgcggcggcggcggccgacggccccgcgccgacgaacgtgacggcagtgctggagaagtccggcaagtacaccaccttcctccggctcctccacgagagccgggtggacacccagatcaacagccagctgatggacagctacaacgggctgaccatgttcgcgcccacggacgccgcgttcgcggcgctcaagccgggcacgctcaactcgctgtcgtcgcaggaccagatccagctgatgctctactgcgtgctcccgcggttctacagcctcgccatgctcaccaccctcggcggccccgtgaacacgcaggcgtccggcgccgacggcccgtacaagtacaagatcaagccgtcgaacaacaacgtcaacatctccaccggcgtcaactgggcgctgctctccaccgtcgtcagcaaggacttccccctcgccgtctactccgtcgacaaggtgccgctcccctacgagctgttcggccccaagccgcccacgcccgcgccggcgccggcgcccgcgccgtccaagtccaagaccaagaagcacaagaagtccgccgggatcgccgagccgcccgtcgccgacgacgcctccgccgacgacaccaccaagaaggccgccgcgcccgccaccgccgtctccaggtgggtcgtcgccgccgccggtgtcttggccggcgccattctcgccgccctctaagctaaggagacgacgacgacgacgaacaaatgcatcgcccatgcatgccgtatgcacgatgactgaactggagtggtgaaccgaatccgaatccgaattgatcgagatcgattgaaccgtgtaccgatattgttgtgctgctctgtatgtccatcggctttattctttctcttattttttttggggttataaaatttcttgttgatttgtatttgtaatttatgtgatatacttactagagtgtactttttttttcccattggattc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0563600, RefSeq:Os05g0563600