Os05g0564400

From RiceWiki
Revision as of 10:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0564400| Description = Similar to GTP-binding protein| Version = NM_001062868.1 GI:115465466 GeneID:4339623| Length = 1726 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0564400

Description

Similar to GTP-binding protein

Version

NM_001062868.1 GI:115465466 GeneID:4339623

Length

1726 bp

Definition

Oryza sativa Japonica Group Os05g0564400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28174424..28176149

Sequence Coding Region

28174709..28175144,28175748..28175965

Expression

GEO Profiles:Os05g0564400

Genome Context

<gbrowseImage1> name=NC_008398:28174424..28176149 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:28174424..28176149 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtaccgggcggacgacgactacgactacctcttcaaggtggtgctcatcggggactccggggtcgggaagtcgaacctgctgtcccgcttcacgcgcaacgagttcagcctcgagtccaagtccaccatcggcgtcgagttcgccacccgcagcatccacgtcgacgacaaggtcgtcaaggcccagatctgggacaccgccgggcaagaaagatatcgagctattacaagcgcatactatcgcggagcagtaggggcactcgttgtctatgatgtcacgcgacatgtcacctttgagaatgtggagaggtggatgagggagctcaaggatcacacggacgccaacatcgtgatcatgcttgtggggaacaaggcagatttgcgccaccttagggctgtctcgactgaggatgcgaaagcatttgctgagaaagagaacactttcttcatggagacgtcggccctggagtcaatgaatgtggagaatgccttcactgaagtgctcacccagatatatcatgtagtgagcaagaaggctcttgacatcggcgatgacccagctgcaccaccaaaggggcagaccatcaatgttggtggcaaagatgatgtctctgcagtgaaaaagtctgcttgttgttcatcagcgtag</cdnaseq>

Protein Sequence

<aaseq>MAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKST IGVEFATRSIHVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFEN VERWMRELKDHTDANIVIMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESM NVENAFTEVLTQIYHVVSKKALDIGDDPAAPPKGQTINVGGKDDVSAVKKSACCSSA</aaseq>

Gene Sequence

<dnaseqindica>1006..1441#185..402#gcacaaacaaagccacccaaaaaagttggggagaggagagaccgagatcgatccgcacccaccgcgacaaacgctctcccctcccctcccctccccctccgcccttcgctcccatccgctccgccccctcgccgcgcagcgccggcggcgagaaggttgagttcgtggggggtgtgaccgaacgatggcgtaccgggcggacgacgactacgactacctcttcaaggtggtgctcatcggggactccggggtcgggaagtcgaacctgctgtcccgcttcacgcgcaacgagttcagcctcgagtccaagtccaccatcggcgtcgagttcgccacccgcagcatccacgtcgacgacaaggtcgtcaaggcccagatctgggacaccgccgggcaagaaaggtaaacaccaccccagatccgcctgtgcccccgcgagctccgctcatcctgatctgcttgttagattaggctaggccattcgttaatcgttggcgattagtgggtttctctcgtgtggatctctgatttcgggtgatatttaattgccgcgctcatatgattggcgtgattaaatccttgtgtaggattaagaagaagagtgataatttggcattctttcaattcatagacttccttgattacaccctaaaatgccccaggccatgacatttttatataaattttaagatattgtaggcaaagattgtgtaggaccaggcattggcatagaataggttgttgtcgtactggcatctagattatcataggaaattgttattgtacagacatctagattatcatggagttaggaagtgtgtagattggggacaaaaagttctttatggccaatgccctgtgctgaacagttagattgatggagtcatggagtatgcggcatattattgcctgctgtgcttgatggaatgttgtttcatgcgcttttgctgtttattaattagttcctgcacagcaaattatcataattttgtgttgcttctgtagatatcgagctattacaagcgcatactatcgcggagcagtaggggcactcgttgtctatgatgtcacgcgacatgtcacctttgagaatgtggagaggtggatgagggagctcaaggatcacacggacgccaacatcgtgatcatgcttgtggggaacaaggcagatttgcgccaccttagggctgtctcgactgaggatgcgaaagcatttgctgagaaagagaacactttcttcatggagacgtcggccctggagtcaatgaatgtggagaatgccttcactgaagtgctcacccagatatatcatgtagtgagcaagaaggctcttgacatcggcgatgacccagctgcaccaccaaaggggcagaccatcaatgttggtggcaaagatgatgtctctgcagtgaaaaagtctgcttgttgttcatcagcgtagatcgaaaggacttgacaaacatggagatacccgaggtggttgatactatgcagtaggacacaggatgttattgcattcatagacctcatctgtattcatgtgttactaagtgtctccttcgttttgccatttgaaacattaattcattcaggacataatcttgccggtatagtttagggatatgaaattgtgaggccgtcagattttcatacaggccatttgtttgcttctattatggtttgaccgcttgatttatttatatgttgctgtctatttttcagtagc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0564400, RefSeq:Os05g0564400