Os05g0565400

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Revision as of 10:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0565400| Description = Protein of unknown function DUF561 family protein| Version = NM_001062873.1 GI:115465476 GeneID:4339629| Length = 26...")
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Gene Name

Os05g0565400

Description

Protein of unknown function DUF561 family protein

Version

NM_001062873.1 GI:115465476 GeneID:4339629

Length

2661 bp

Definition

Oryza sativa Japonica Group Os05g0565400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28210101..28212761

Sequence Coding Region

28210333..28210461,28210611..28210733,28210821..28210928,28211015..28211104,28211210..28211269
,28211360..28211422,28211510..28211584,28212243..28212308,28212513..28212692

Expression

GEO Profiles:Os05g0565400

Genome Context

<gbrowseImage1> name=NC_008398:28210101..28212761 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:28210101..28212761 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcagggtcgctgggacttctccaggcgccatcgtccttcacggcggcagcggcgagccggccggcttctcggcgagcaccgcgagctctgttcgccgtgagagcctcggctgccgccgatgccaccaaggacgccgtcctcaaggccttccgcgagaagagagctctcaagatcatttcagggcttcagaatttcgacaggagtagtgttgcctctgttgtctcggctgcagataagggaggtgccacccatgttgatatagcgtgtgaccaagacttagtaaagcttgctctggagcttacttcccttccgatttgtgtctcctccgtagatccttcagcattccgttctgcggtagaagctggagcaaagatgattgagattggaaactatgattctttttatgacacaggcatcgaattctcttctgagaagatcttaaagctgaccaaggagacaagggaaatgcttccagatataacactgtccgtaacagttccacatacactgagcctcctagatcaggtaagacttgcagagctactcgaagaggaaggcgctgatatcatccaaactgaaggagggaagtgttctagtccaacaaagcctggagtgcttggattaattgaaaaggcaacaccaactttggccgctgcatactccatctctcgggctgtcacaattccagtgatgtgtgcatctgggctaagctcagtgactgcaccaatggcagtaactgcaggagctgccggtgtgggagttggttctgctgtcaacaaacttaacgacatcgtcgcaatggtcgctgaggtgaaaagtattgctgaagcattgggtttgccttcacggaacgtgtctagcaacttgagaacagttcaccattag</cdnaseq>

Protein Sequence

<aaseq>MAAAGSLGLLQAPSSFTAAAASRPASRRAPRALFAVRASAAADA TKDAVLKAFREKRALKIISGLQNFDRSSVASVVSAADKGGATHVDIACDQDLVKLALE LTSLPICVSSVDPSAFRSAVEAGAKMIEIGNYDSFYDTGIEFSSEKILKLTKETREML PDITLSVTVPHTLSLLDQVRLAELLEEEGADIIQTEGGKCSSPTKPGVLGLIEKATPT LAAAYSISRAVTIPVMCASGLSSVTAPMAVTAGAAGVGVGSAVNKLNDIVAMVAEVKS IAEALGLPSRNVSSNLRTVHH</aaseq>

Gene Sequence

<dnaseqindica>2301..2429#2029..2151#1834..1941#1658..1747#1493..1552#1340..1402#1178..1252#454..519#70..249#acggtcttttcttgtgtagtgcaatcttatctctttccctccaagaaacacttcagcagaggagcaacaatggcggcggcagggtcgctgggacttctccaggcgccatcgtccttcacggcggcagcggcgagccggccggcttctcggcgagcaccgcgagctctgttcgccgtgagagcctcggctgccgccgatgccaccaaggacgccgtcctcaaggccttccgcgagaagagagctctcaaggtatcactcttatgaatcccagttcttgttgatgccttagctctgccaatgcaatgtttaactgcattaagttctgaatgctactccatgtctgaaggctgaagtgtagatgtagctgtctctggattttgaggcctaacagtataaaaataatgttgcttagattgctggaatctgatattcattgacatctttgcactgcagatcatttcagggcttcagaatttcgacaggagtagtgttgcctctgttgtctcggctgcagataaggtgtggatattgcatttatcttgcttatttttttggtttggttctttgcatgtggataaagtgtttgtaccaattacgttctaggagtagctttgcaggcttatctgaaaaactgaaatcatgtcaacgacaaaaacaatgtattgcgtggctatcatgaaatccatccctgaatatagtaatactagtattcatttttacccagtcaacacagtaatgttgagttgcctactgatgtgctccgtagctataaataatttgggcttatgtcactcctgattttctcgacaaagaagtctacaagcaaacggcactgcagtctagtgcagacgacctgttgtttagctgataattagagtcataattttagcgcacagcatttactatgatatatcaatgaaagttcgctgcatcacccaagtatgctctttgaagtcatacaacttccacaaaatcagtaagcagccattaatttttgaactaaggcaaccaatattgccatctcattctcttctccaacagtcaaaatattttctaaatatttgcagaaatctctgtatgaagtttgttaataagttaggtaactttcaactagaacagccaaattttggagggaattacacatttgtaatgctattcagctattttatgatttcagggaggtgccacccatgttgatatagcgtgtgaccaagacttagtaaagcttgctctggagcttacttcccttccggtgagcaaagcgttcatgtagctatcctacattatccaactgtggggttagctattctaaatgcattgtgggaattgcttgttgcagatttgtgtctcctccgtagatccttcagcattccgttctgcggtagaagctggagcaaagatggtcaggctctaagttttgataagaagtatatgaatccgaaagaactaatttccagtagttccttccgctcacaagcttttctccatgcagattgagattggaaactatgattctttttatgacacaggcatcgaattctcttctgagaaggtaaattcgttctctttgattatatgagtagtcagttatgataatgcatctgtttactgcagttatacacgatttgtttctgagaagaactgctcatcatttcagatcttaaagctgaccaaggagacaagggaaatgcttccagatataacactgtccgtaacagttccacatacactgagcctcctagatcaggtataccacttgtcatctcttcaacaatactctgaaatggtaaataaccaattgtttaatctggaaacgtttatgcataattacaggtaagacttgcagagctactcgaagaggaaggcgctgatatcatccaaactgaaggagggaagtgttctagtccaacaaagcctggagtgcttggattaattgaaaaggtatggcaaaaattacagaaaaagaaagacctcacaatcaaatttagtatacaatgtaaactcataaatactgtttaacaaattcaggcaacaccaactttggccgctgcatactccatctctcgggctgtcacaattccagtgatgtgtgcatctgggctaagctcagtgactgcaccaatggcagtaactgcaggagctgccggtgtggtatgtatccgtctctgaaactctgcagaatggttgagtaatcttcaggcatcacgaactttgtagcccaataatctatagcttactagttcatgtgttatttcatgtttcaaacatttgattatagttggcttttcttgtgattgcagggagttggttctgctgtcaacaaacttaacgacatcgtcgcaatggtcgctgaggtgaaaagtattgctgaagcattgggtttgccttcacggaacgtgtctagcaacttgagaacagttcaccattaggggctagttacctcctcttctagacaaactctagcgatcaataatattatcaaaagatgcagtagcttgacatttcacagtctactgcctttcgtaacatatatgcaaagcaatgcagaggtgccaattggcgttttcgacggttgtaatgtagctttggccagtggcgttgttgaactgagatcaagtttcagctgcaatcaattgtcagattgtcacatctttcccatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0565400, RefSeq:Os05g0565400