Os05g0565500

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Revision as of 10:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0565500| Description = 6-phosphogluconate dehydrogenase family protein| Version = NM_001062874.2 GI:297604921 GeneID:4339630| Length = 1392...")
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Gene Name

Os05g0565500

Description

6-phosphogluconate dehydrogenase family protein

Version

NM_001062874.2 GI:297604921 GeneID:4339630

Length

1392 bp

Definition

Oryza sativa Japonica Group Os05g0565500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28213377..28214768

Sequence Coding Region

28213826..28214764

Expression

GEO Profiles:Os05g0565500

Genome Context

<gbrowseImage1> name=NC_008398:28213377..28214768 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:28213377..28214768 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggtggacgtggcggcgtttgggttccctgctccggtgaggccgggggcgacgcgggtggggtgggtgggcatcggcgtcatgggtggcgccatggccgcgcgcctcctcgccgctgggttcgcggtgaccgcgtacgcgcggacgccggccaaggcggaggccctagtcgctgccggcgcgagcctcgcgggctccccggctgccgtggccgcggcgtgcgacgtggtgttcaccatggtgggaaaccccggcgacgtccgcgccgtcgtcctcgacgcggcctccggtgtcctcgctggcctccgccccggcggcgtcctcgtggactgtactagctcctccccttccctcgcccgcgaggtcgcggcggcggcgcgcgcggctgggtgctacgccgtcgactccccggtctccggcggcgacgtcggcgcgcgcgacggcgcgctcgccctcctcgccggtggcgacgaggcggtggtgagctggctcgcgccgctcttcgcccacctcggcaggccgacctacatgggcccgcccggcagcggccagagcagcaagatcgcgaaccagatcgcggtggccggggcggtggtcggtgccagcgaggcgctggcgttcgccaacgcggcggggctcgacgcgccgctgttcctcgacgcggtgtccaagggcgcggcgggttcgcgcgtcatggacatcttcggcgagcgcatgctgcgccgtgagttcgcgtccggtggctccgtgaagtacatcatcaaggaccttggcatggcgctggagaccgaggaggggccggagggggccaaggcgctgccaggggcggcgatgttccggcagatgttctccgcgatggcggcgaacggcgacggcgacctgagcctccagggattgatcaccgtagtcgaacgcctgaacggcattcgcaagtaa</cdnaseq>

Protein Sequence

<aaseq>MEVDVAAFGFPAPVRPGATRVGWVGIGVMGGAMAARLLAAGFAV TAYARTPAKAEALVAAGASLAGSPAAVAAACDVVFTMVGNPGDVRAVVLDAASGVLAG LRPGGVLVDCTSSSPSLAREVAAAARAAGCYAVDSPVSGGDVGARDGALALLAGGDEA VVSWLAPLFAHLGRPTYMGPPGSGQSSKIANQIAVAGAVVGASEALAFANAAGLDAPL FLDAVSKGAAGSRVMDIFGERMLRREFASGGSVKYIIKDLGMALETEEGPEGAKALPG AAMFRQMFSAMAANGDGDLSLQGLITVVERLNGIRK</aaseq>

Gene Sequence

<dnaseqindica>5..943#ggtcatggaggtggacgtggcggcgtttgggttccctgctccggtgaggccgggggcgacgcgggtggggtgggtgggcatcggcgtcatgggtggcgccatggccgcgcgcctcctcgccgctgggttcgcggtgaccgcgtacgcgcggacgccggccaaggcggaggccctagtcgctgccggcgcgagcctcgcgggctccccggctgccgtggccgcggcgtgcgacgtggtgttcaccatggtgggaaaccccggcgacgtccgcgccgtcgtcctcgacgcggcctccggtgtcctcgctggcctccgccccggcggcgtcctcgtggactgtactagctcctccccttccctcgcccgcgaggtcgcggcggcggcgcgcgcggctgggtgctacgccgtcgactccccggtctccggcggcgacgtcggcgcgcgcgacggcgcgctcgccctcctcgccggtggcgacgaggcggtggtgagctggctcgcgccgctcttcgcccacctcggcaggccgacctacatgggcccgcccggcagcggccagagcagcaagatcgcgaaccagatcgcggtggccggggcggtggtcggtgccagcgaggcgctggcgttcgccaacgcggcggggctcgacgcgccgctgttcctcgacgcggtgtccaagggcgcggcgggttcgcgcgtcatggacatcttcggcgagcgcatgctgcgccgtgagttcgcgtccggtggctccgtgaagtacatcatcaaggaccttggcatggcgctggagaccgaggaggggccggagggggccaaggcgctgccaggggcggcgatgttccggcagatgttctccgcgatggcggcgaacggcgacggcgacctgagcctccagggattgatcaccgtagtcgaacgcctgaacggcattcgcaagtaaggaaggtgttcgtcagaatgccgcactgggaacgaaacgcttctgtatgttagacttaatcttgttgtttattgtgtgagttgtgattagtgcgtgcatgagttagcttgatcaagaaaatccatgatctgcatgtaagtgcttgcatgtaggaagttatatgtggatatcggctgggagtagtggccgagtcaagtagctggagtagtggcatggattgtggatcagttagctgtgttgcatgtgtgttagtgcatttgcatgcaaagagatatggccttcatgcatagagacgtgattagtggttaattagtggctaagtcatgtgagtggtggccggttagtgcggcaaaaacgtggctagtgtgctgctgcgcgtgtgtgctatttaagcatgtaatcagtgtgtgattaatgtgtggagaatagaaagtgaagtgtgtggtggt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0565500, RefSeq:Os05g0565500