Os05g0566400

From RiceWiki
Revision as of 10:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0566400| Description = Similar to Blast and wounding induced mitogen-activated protein kinase| Version = NM_001062877.1 GI:115465484 GeneID:...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0566400

Description

Similar to Blast and wounding induced mitogen-activated protein kinase

Version

NM_001062877.1 GI:115465484 GeneID:4339633

Length

5180 bp

Definition

Oryza sativa Japonica Group Os05g0566400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28270410..28275589

Sequence Coding Region

28270932..28271362,28271464..28271546,28271747..28271839,28271918..28272127,28272257..28272414
,28272510..28272659,28273101..28273160,28273275..28273402,28273914..28274322
,28275420..28275476

Expression

GEO Profiles:Os05g0566400

Genome Context

<gbrowseImage1> name=NC_008398:28270410..28275589 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:28270410..28275589 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctgaggcaaatgcgggtgggcgggcggcgccggcggcggagcagcggagcaagaacacaacagagatggatttcttcagtgaatatggtgactccagccgatacaaaattcaagaaatcgttggtaaaggaagttatggagttgtttgttcagctattgaccaacataccggtgacaaagtagcaatcaagaaaatacacaatatctttgagcatctatctgatgctgctaggatcctccgtgagatcaaacttctccggcttttacggcatcctgatattgtcgagatcaaacatataatgttacctccatctagaagggacttcaaagatatttatgttgtcttcgaactgatggatacagacctccaccaggttattaaggctaatgatgacttaacgaaggaacatcatcagttctttctgtatcaaatgcttcgagcattgaaatatatccatactgctaatgtttatcatcgtgatttaaagcccaaaaatatattagcaaatgctaactgtaagctcaagatatgtgattttggactagcaagagttgcatttaatgacactcctacaacagttttctggacggactacgttgcaactagatggtacagggctcctgagctgtgtgggtctttcttttctaagtattcaccagctatagatacatggagtattggttgcatttttgcggagattttgactggaaaacctttgttccctggtaaaaatgtggttcatcaattggacttgatgactgatctcttgggtacaccatcaatggatgctatttcaaggattcggaatgacaaggcaaggaggtatctgagcagcatgaggaggaagcagccagtacctttttcagaaaagttcccaaatgtagatcctttggcactcaagctcttacaaaggcttctagcatttgatccgaaggatcgacctactgcagaagaggcgttggctgatccatattttaaaggccttgcaaaagtggagagagaaccatcatgccaaccaatttcaaaaatggagtttgagtttgagcgaagaaaggttaccaaagatgatatcaaggaacttatattccgtgagatattagagtatcatcctcagcttctgaaggattacatgaatggctccgaaaacacgagctttctatatccaagtgctgttgataatttccggaggcaatttgccatcttagaggaaaacggaggaaagagtggtgcactagataggaagcatgtttctcttccaagggctacaacagttcactctacatcaattcctccaaatgaaggcctagatgcaacatcccaagttactcaaaggatcccaacagctagaccaggaagaacggttggtccggtattaccattcgagaatccaggcgccgcagatccgcacagcgcacggagggtggtgaggaatccgatggttcctccagcagctgccaacaagtcaggatacagctacaacctaaagtcagactactctgataggcaacatcaggaagagcttgagaaagatcgtgtgcagtacaggcctgcacaacacttgatggatgctaaagttgctccagatacagccccggacatacggtcttcacaatactactttacgaggagtgctcccagaactgatctaacagacagggctgcactccaggggagcatgctatacggcattgctccgttcaacggcatcgcagcagttgctggtggatacagcaaggttggtgccgttcaatatggtgtttcaaggatgtactag</cdnaseq>

Protein Sequence

<aaseq>MPEANAGGRAAPAAEQRSKNTTEMDFFSEYGDSSRYKIQEIVGK GSYGVVCSAIDQHTGDKVAIKKIHNIFEHLSDAARILREIKLLRLLRHPDIVEIKHIM LPPSRRDFKDIYVVFELMDTDLHQVIKANDDLTKEHHQFFLYQMLRALKYIHTANVYH RDLKPKNILANANCKLKICDFGLARVAFNDTPTTVFWTDYVATRWYRAPELCGSFFSK YSPAIDTWSIGCIFAEILTGKPLFPGKNVVHQLDLMTDLLGTPSMDAISRIRNDKARR YLSSMRRKQPVPFSEKFPNVDPLALKLLQRLLAFDPKDRPTAEEALADPYFKGLAKVE REPSCQPISKMEFEFERRKVTKDDIKELIFREILEYHPQLLKDYMNGSENTSFLYPSA VDNFRRQFAILEENGGKSGALDRKHVSLPRATTVHSTSIPPNEGLDATSQVTQRIPTA RPGRTVGPVLPFENPGAADPHSARRVVRNPMVPPAAANKSGYSYNLKSDYSDRQHQEE LEKDRVQYRPAQHLMDAKVAPDTAPDIRSSQYYFTRSAPRTDLTDRAALQGSMLYGIA PFNGIAAVAGGYSKVGAVQYGVSRMY</aaseq>

Gene Sequence

<dnaseqindica>4228..4658#4044..4126#3751..3843#3463..3672#3176..3333#2931..3080#2430..2489#2188..2315#1268..1676#114..170#actcggctcggctgcttcttcttctccttctcctcatcctccacatcgctgcggattcgagcggcgaggcttggattttctcccggcgagatctccccggcggccgtctcgcgatgcctgaggcaaatgcgggtgggcgggcggcgccggcggcggagcagcggagcaaggtgggtggtggccgtgggagaacactaaagatttcgctgctgcttcgttttgtttctctgggttcttggggttcgtcgccgtgttcatctgaacttggataggctggacgaattggtgtttttttttgttttttttgggggattgtgggttctgatccgaagaagtttggtgtcctgctcctgcgcgtgagcgtaaacggcgtcaggaaattgctcccggatttggagcggattcttgccttgtaggaagatcctatcctatcatatcctatcctacctgagctttgcgagcgtttcctgaaatctttcctgtgcatctgcaagaagccatttatctctttccttaaaacgtagtctcctactacaaggctgattgacttgtataaacgctactattagcccgtaataacacggtaattcttgtttggttcaaaatcttggggtaatgggtaagtttatcctaatccaagcaagctgtattttctttccgggatatagcactgtagatatctttgcccacttaaaaaaaaggaggtatatttttacttataggtttgagccaaaggtgtatcttttccagactgatcattagacttgtcaagaattagggcgatcattagttcaccacagcgggagccgggagtagaggtcaggtcagtttttgtttggtcaggctgcagtgtatctgtatgtttctgtaatccggttctgtgaattacttgttgcagaccttcagtctgtggtttccagtcgtcgagcatagactaggcaaaggttactgtttcattggtttttgtttttgcctttttggttgtgatgtctttggtgcaaggagtattattaggagttcaattgcaagctgtatgtaattggttaactttttttttttggcaaagcttcttagtatcccgataatgcgaaacccttggttttgtgattagttgtgttgcagctgcttagctcttggggaagatgtaactcagtgaatttgtgctttgttccaattcacatgccattgcctaaattatgtaattgttcttggatgccattgtgttttgagacagagtgctgaattttcaatcttgaattttgtccagaacacaacagagatggatttcttcagtgaatatggtgactccagccgatacaaaattcaagaaatcgttggtaaaggaagttatggagttgtttgttcagctattgaccaacataccggtgacaaagtagcaatcaagaaaatacacaatatctttgagcatctatctgatgctgctaggatcctccgtgagatcaaacttctccggcttttacggcatcctgatattgtcgagatcaaacatataatgttacctccatctagaagggacttcaaagatatttatgttgtcttcgaactgatggatacagacctccaccaggttattaaggctaatgatgacttaacgaaggaacatcatcagttctttctgtatcaaatgcttcgagcattgaaatatatccatactggtaagcatattatgaaatcttacctaccctctgaaagttcttctatcatggtatcacattggagcttctctgagttaggattatgagcaattctaagtagtgcatttgcacaaaaagttacagttttctattaagcaatgcgatagtcttagtcttattgtcctgtgcattcttgaagtagcagtcgaaattttcctagtgccatttcttctgtcttgtctgtatggtgttaaccatgattctattgatttcccaagatagctgtgaggttcagattatatagagctcttctctttgtattgaaatttctttgacataagtgccaattgccaaaaatgtgctctcaattcaatagctatcaagtcgtgttcagttcagaaagtcttctgttgtatgaatcctgttcaaattctgtctttggatctgctagctgcagtaactaaatttattatatctcaattgagcattgagtatttatctatgttctgatgagaagtctttgtgggtgcagctaatgtttatcatcgtgatttaaagcccaaaaatatattagcaaatgctaactgtaagctcaagatatgtgattttggactagcaagagttgcatttaatgacactcctacaacagttttctggacggtatgttattttcaacactaagttctctatggaaaactagatgccatgtcgtgttccataccaaagaatttgtcatgcaacataagtctcactgtctgcttcaccatgcaacaggactacgttgcaactagatggtacagggctcctgagctgtgtgggtctttcttttctaaggtataatcaaatttcccaacctgtgggttgctttatcagagtattatttcgtgtgctcttcattttcatagggctctacagcataagaaattttagcaacatgttccaatttcttcttcttatctattgaaattgaccttgagatgccacacacatacacataaagagcaataaaattaaggactgagattctacatggttggtgcgtaggtcagtgtccttctttggttattatatgtcagttagttttagagtagtgtagcagcatattaatagcaggctgcttgttcaggaacatatttttgacaagccaaaatacactgcttaatgttgcaggtactcctgtaaaatctgctgtagttgttttttgttatccctaccttcatttttacctccattcctatgctaagttggtgatactaaattgattcttttctgcagtattcaccagctatagatacatggagtattggttgcatttttgcggagattttgactggaaaacctttgttccctggtaaaaatgtggttcatcaattggacttgatgactgatctcttgggtacaccatcaatggatgctatttcaagggtatgacttattattattatcagaaacattgacatgtttaattctccagcacaaattattccaggtctgatttttccatgttttgactgcttcagattcggaatgacaaggcaaggaggtatctgagcagcatgaggaggaagcagccagtacctttttcagaaaagttcccaaatgtagatcctttggcactcaagctcttacaaaggcttctagcatttgatccgaaggatcgacctactgcagaagaggcatgcaagctctacttgaattagattagttttcatgctactgttttgcattgtcatctgtgctactaaacatagttatatatgcctactttagatgttattctaacaatctattttgtgtataatcaggcgttggctgatccatattttaaaggccttgcaaaagtggagagagaaccatcatgccaaccaatttcaaaaatggagtttgagtttgagcgaagaaaggttaccaaagatgatatcaaggaacttatattccgtgagatattagagtatcatcctcagcttctgaaggattacatgaatggctccgaaaacacgagctttctatatccaaggtttttatcttgacacatcttataaattatttccctgtttatatggttatattcacaacctttatttttgttatgtagtgctgttgataatttccggaggcaatttgccatcttagaggaaaacggaggaaagagtggtgcactagataggaagcatgtttctcttccaaggtaacttacatcgttacagttctttccaatgtgatcataattgccaattcagtgatttgtgctgccatctattgcatctgttaaaattaatacacaagggaagaaaaaatgttttaccattagtattgggttatcttggctgtcagatcctagatattgtgcttgaactttgcagctgacctttgatcggctctttgcagggctacaacagttcactctacatcaattcctccaaatgaaggcctagatgcaacatcccaagttactcaaaggatcccaacaggtatctgtttatctttaccatttgtgacttaatccagtgtacattttaattttgaattcaaagagcattgatctcatatatttcatctttgtcactcacagctagaccaggaagaacggttggtccggtattaccattcgagaatccaggcgccgcagatccgcacagcgcacggagggtggtgaggaatccgatggttcctccagcagctgccaacaagtcaggatacagctacaacctaaagtcagactactctgataggcaacatcaggaagagcttgagaaagatcgtgtgcagtacaggcctgcacaacacttgatggatgctaaagttgctccagatacagccccggacatacggtcttcacaatactactttacgaggagtgctcccagaactgatctaacagacagggctgcactccaggggagcatgctatacggcattgctccgttcaacggcatcgcagcagttgctggtggatacagcaaggttggtgccgttcaatatggtgtttcaaggatgtactagagttttagtcaggcagttgtggaattgctccatagatgagcaagatgggaatgccggagcatggctttgtgttgtgcccatccacccagatataaggctggcaagggaattggtcgcatctggtcatggatgcaggcgaaggttgaagaaaggagaagggaaactcctattccatctcaggcggccattgtccatttgaaatggcagtgagctcgcgatggtgaaagaggaaaagagggagagaaagttcatggtggaatttctcgcactttatttgttgtggagaaaaggagaaaatgtgaataacagcactaggctgggcttgtgtacatacctgcaacccttgatttttttttcttgttttcttgctagaagctgttgcttcttgtgtaaacctgcaaaagcatactccgaaaatgaatcattcgccaaaaaattgagacggcggattatttggtagaatgttatgctagctatccaaagtttaatcttgttgaaatgaggaagcaaaatatgctagtg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0566400, RefSeq:Os05g0566400