Os05g0568100

From RiceWiki
Revision as of 10:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0568100| Description = Similar to Iron sulfur cluster assembly protein 1, mitochondrial precursor (Iron sulfur cluster scaffold protein 1)| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0568100

Description

Similar to Iron sulfur cluster assembly protein 1, mitochondrial precursor (Iron sulfur cluster scaffold protein 1)

Version

NM_001062890.1 GI:115465510 GeneID:4339646

Length

3428 bp

Definition

Oryza sativa Japonica Group Os05g0568100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28371409..28374836

Sequence Coding Region

28371498..28371831,28372978..28373032,28374354..28374483

Expression

GEO Profiles:Os05g0568100

Genome Context

<gbrowseImage1> name=NC_008398:28371409..28374836 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:28371409..28374836 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgcgcgcggcggggaagcgtctcctcggcgttgggctgcgcccggcgggcggcggcgctggagaggcggcggcggcggcggcggcttcggcggtggccgttgtgaggaggagggggtaccacgagcgggtggtggaccactacgacaacccgcggaacgtggggacgttcgacaaggacgaccccgacgtgggcacgggactcgtcggcgcgccggcgtgcggcgacgtcatgaagctgcagatccgcgtcgacgaggagtccggtaggatcgtggacgcctgcttcaagaccttcgggtgcggctccgccatcgcctcctcctccgtcgccagtgagtgggtgaagggaaaacaaatggaggatgcagcttcaatcaagaacagtgagatagcgaagcatctatcgcttccgcctgtaaagctccactgcagcatgcttgcagaggatgcaatcaaggccgccgtgaaggattatgaagcgaagaaggcaaagttggataaggggaacgagtag</cdnaseq>

Protein Sequence

<aaseq>MLRAAGKRLLGVGLRPAGGGAGEAAAAAAASAVAVVRRRGYHER VVDHYDNPRNVGTFDKDDPDVGTGLVGAPACGDVMKLQIRVDEESGRIVDACFKTFGC GSAIASSSVASEWVKGKQMEDAASIKNSEIAKHLSLPPVKLHCSMLAEDAIKAAVKDY EAKKAKLDKGNE</aaseq>

Gene Sequence

<dnaseqindica>90..423#1570..1624#2946..3075#gcgttcgtggcgagaagcagagagaggagagaaatccagagacgcctcgacccctccatcccgatcaaggcgagaattcgtcggcgacgatgctgcgcgcggcggggaagcgtctcctcggcgttgggctgcgcccggcgggcggcggcgctggagaggcggcggcggcggcggcggcttcggcggtggccgttgtgaggaggagggggtaccacgagcgggtggtggaccactacgacaacccgcggaacgtggggacgttcgacaaggacgaccccgacgtgggcacgggactcgtcggcgcgccggcgtgcggcgacgtcatgaagctgcagatccgcgtcgacgaggagtccggtaggatcgtggacgcctgcttcaagaccttcgggtgcggctccgccatcgcctcctcctccgtcggtgagtaaacctagatccccagtatcggtgtgcttgtgaaaatctggtgggtaattgtacgaatgatggaagtgactgatgtcgcacttgaatgtggcgatgaaatttgtaaaatagggaagttattgtaggttttggttccatttcaatcaaattctattattgcaaagcccttagtattgaatagtgccgtccccgctagttcaaaattacgaatatgcctacctgagcattgcaatattgtgaatctgagaattatagtagatggctgaaattgagtttgacttacttttttgtgatgctattggttctaatattctacgctgttgccttaatgtgttcatattagtttttatagggtatagatatatcgtgtgggcattgtatatttgtagatatcatatatcctaacacagaaattcccatttccacggctagtatccagattactttgtggatcctatgtcttatgttaggagacaaggccaacatgttaggagagcagtcactgaatcactcacaagttgttttgaggttgatcaaccaactgattcagtgactgctcttgcttactatgttaagatttgagatagtgataagcactcttatgttgaaaactgcaaatatctgtacattattccataaattcgcatttagcaattgaactctgttgaccttttaattgtttgcaagtgtcttttaggtaataacatgaggacgtgccgttatgtatccaattaattgctgtctccctaacatgttggacttgtctcctaacatgttgccattatgtagccaatctagctgtcattgcggtcacaataacatttgacacacttgatatgcatttagggtgcaccaaaaatatattgacttcaatgtttaagaagccgaaaaagttaattttgcatggagtgtcaatcagttaaacatacttgagatacaattttttttgggtttagaagtctcttttagatataatatgcgtgcttatgaagttataaagttgaaatggctattggctggctctctctagactgcatagatacaattcttactatcatgcatggcttttcctaatatcattattactatattacaattgaggttaaaaagtttgtctctctaatatagttttaatttcagccagtgagtgggtgaagggaaaacaaatggaggatgcagcttcaatcaagaacaggtaaataactgctgtacttgctgatctagtccttttttttgtggggtctttgttttcttgttgatgtagtcttttcattatatgttagttctcagcaataaaggttgttttctatgttagttctcagcaataagattcattagtttcttgtgagatacactagagtgtcctctagatggctcggtggtatgggcttcaggatatgggcttgattttttttgcagcattggtagtcataggatattttctgttcttatttgcttgatgatatctatttgcttttatagatttgagcacaatgcctgattgctgatttttcttggaagcattggctgactcatggtagtgactaccatgtccattgagtctgcaaattcattgaaaataccagggcaaatgttaaattcatgtatccttaagttttagcctgtcttttttactatagtttgcttggagttttaatggtttccaattgcatgcctgggacaacgaccggtttttctggtagtgcaccagcacatctacatttatttttacctcttgcgcagctgtaccctgcatctgaatgttaattgtcggaacttcatagtaatacttcaggactgcaaattttatctagtgtaaaatttagtacctcaatactgattggagaagaaggagaaaacaatagagcaaactgatataaaagagagaagttttaacagcaagctgaaccactttatcttctgcaaaacccaccccaaagtgtgttgtccaggcctgcagtaggcagtaggcccacattggtgttcatctcatatctgtgaatggttagatgcaagataaggcatctaatccaaaagaagaatggaggtggaaaacttaggtcttctaaatcccgtgaaattcccgaatgcttagttatctattaactaaataaagtcatctatttgatgttacaagttctctcttttatgtcagcttgctccattgtgccttggtattaggaggtaccaaattttttttataatagagaattattactttctgcattttgtaaatgtatgatactattaatataaatgtctatttgcacaaatatttatagaacatatgaagttcgaaatgaatttaaaaaagtcaacgatgtcatacatataaccagaggtagtacatctcagggatcgtaggctcatccctcatttttaggaaacatcctttaccatattattgtgagtttcacttacaatcctattgtcttccgcctgtggctagcattgcttgggcacaagctttattgtgctcattggagttctattgacttatcatgtcctgttttcagtgagatagcgaagcatctatcgcttccgcctgtaaagctccactgcagcatgcttgcagaggatgcaatcaaggccgccgtgaaggattatgaagcgaagaaggcaaagttggataaggggaacgagtagacatcctaaagagagaacaggggatagtccagtagcatagcatgtactagtatcataaaatgtgtgatgatgtttatattgccacggaaataaacgcatgcaacgttatagtttgtattaggcaaagcctgcccctggcagcggttcgtccagctatagtacaccacatgttgtcgaaggtgtacacgaaggtatgcaaaacttgccagtgtcgtttgtacccaagttctgtacatgaaaagtgcttgatactggtgagtctaatgtagaaaaggcgtttaaccaacctgtaaatgatacagtaccctagtattgtagtacttcgtccgtttcacaatgtaaaactttctagc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0568100, RefSeq:Os05g0568100