Os05g0568200

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Revision as of 10:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0568200| Description = Similar to Typical P-type R2R3 Myb protein (Fragment)| Version = NM_001062891.1 GI:115465512 GeneID:4339647| Length ...")
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Gene Name

Os05g0568200

Description

Similar to Typical P-type R2R3 Myb protein (Fragment)

Version

NM_001062891.1 GI:115465512 GeneID:4339647

Length

1654 bp

Definition

Oryza sativa Japonica Group Os05g0568200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28378255..28379908

Sequence Coding Region

28378255..28378411,28378646..28378775,28379446..28379908

Expression

GEO Profiles:Os05g0568200

Genome Context

<gbrowseImage1> name=NC_008398:28378255..28379908 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:28378255..28379908 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagtatacggtggaagggagcggcggcggcggcgtgcagacggtggaggcggcggtgcgcaaggggccctggacgatggaggaggacctcagcctcgtcaactacatcgccgccaacggcgagggcgcgtggaacaccctcgcccgcgccgccgggcttaaccgtaccgggaagagctgccggctgcggtggctgaactacctgcgacccgacgtgcggcgcggcaacatcacgccggaggagcacacgctcatcgtcgagctacaggccagatggggcaacaggtggtccaagattgcaaggtaccttcctggccggaccgacaacgaggtcaagaacttctggaggaccaagatacagaagaagcacaggaaaagcactgacggaatttacgcgacgacgacgagcgaaagcatcatgcctgcggctacagtgcaccagaacacggtggccgaggaccaaggcagcagcagcgtctccggccggaccaccaccgccaccgtcgccgtcacgcaggagtacgccactgaggcgccgccgccgagcggcatgagtagtggtagctacttggaccagctgcagccaggctacgcgagctcaatccatggaggacaagatggcggtgctgctgccgccgccgctggtgacgtcgtcgtctccgacgagttcttggcagcgtcgagcgacaacttctgggccctcgaggatttgtggcccacggtgcagtctctccacggcaattgctga</cdnaseq>

Protein Sequence

<aaseq>MQYTVEGSGGGGVQTVEAAVRKGPWTMEEDLSLVNYIAANGEGA WNTLARAAGLNRTGKSCRLRWLNYLRPDVRRGNITPEEHTLIVELQARWGNRWSKIAR YLPGRTDNEVKNFWRTKIQKKHRKSTDGIYATTTSESIMPAATVHQNTVAEDQGSSSV SGRTTTATVAVTQEYATEAPPPSGMSSGSYLDQLQPGYASSIHGGQDGGAAAAAAGDV VVSDEFLAASSDNFWALEDLWPTVQSLHGNC</aaseq>

Gene Sequence

<dnaseqindica>1..157#392..521#1192..1654#atgcagtatacggtggaagggagcggcggcggcggcgtgcagacggtggaggcggcggtgcgcaaggggccctggacgatggaggaggacctcagcctcgtcaactacatcgccgccaacggcgagggcgcgtggaacaccctcgcccgcgccgccggtacagtggctgtggcatggcatccatatgctccttgtcaactgattggtccttaaccattagtgatgataaaagacaattaccattataaccttctagcttttatacctggcccacactcttaagtacctttgcatctgtaccttctatcttagctctaatatataccaagcatagtagaaaatctctctctctctatatatatatatatatcttcacgccatcaagctgcagggcttaaccgtaccgggaagagctgccggctgcggtggctgaactacctgcgacccgacgtgcggcgcggcaacatcacgccggaggagcacacgctcatcgtcgagctacaggccagatggggcaacaggtaacgcacattaactcgatcgcctccatcgcaaaatattgctatgacatacagcatttatgattccgagatggtcttccgtttcgggctctggcggaatgacggttttcacgaaatccggtacaaagccggtagattccgaacaaatttcgtaaaccaaactttaaatacaacttccctgagtttaccgataagctcgcgaaaaccggtcagatttgttaaattccgagcaaaatcatcgaaatttcatcagtaactagaaaaagaggtaaactgagattgtttttctttttttaatttgttattcttttctttcgtactgtaaatttcagtaaatacatggaatacatcttttttttattttataaatatcatactatttataagattttatttaatttttttttccttttttatcaattcaaatttgaatttggatgaaactcatcaaaatctcagacatcttctattttggagcctcgtcgaaacctcgaaatttcgcgaaattcgaccggttttcgttggaattgtgaaccctaacgacacatgctaatattacgaatctacgtatatatatatccaaaattatagtattagtatgtctcatttagtactggctgacaaaattttggaagggatcatcgatagattgatcacttggattcttcaggtggtccaagattgcaaggtaccttcctggccggaccgacaacgaggtcaagaacttctggaggaccaagatacagaagaagcacaggaaaagcactgacggaatttacgcgacgacgacgagcgaaagcatcatgcctgcggctacagtgcaccagaacacggtggccgaggaccaaggcagcagcagcgtctccggccggaccaccaccgccaccgtcgccgtcacgcaggagtacgccactgaggcgccgccgccgagcggcatgagtagtggtagctacttggaccagctgcagccaggctacgcgagctcaatccatggaggacaagatggcggtgctgctgccgccgccgctggtgacgtcgtcgtctccgacgagttcttggcagcgtcgagcgacaacttctgggccctcgaggatttgtggcccacggtgcagtctctccacggcaattgctga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0568200, RefSeq:Os05g0568200