Os05g0569400

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Revision as of 10:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0569400| Description = Aldose 1-epimerase family protein| Version = NM_001062898.1 GI:115465526 GeneID:4339654| Length = 2414 bp| Definiti...")
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Gene Name

Os05g0569400

Description

Aldose 1-epimerase family protein

Version

NM_001062898.1 GI:115465526 GeneID:4339654

Length

2414 bp

Definition

Oryza sativa Japonica Group Os05g0569400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28424270..28426683

Sequence Coding Region

28424858..28425028,28425154..28425317,28425578..28425712,28425814..28425931

Expression

GEO Profiles:Os05g0569400

Genome Context

<gbrowseImage1> name=NC_008398:28424270..28426683 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:28424270..28426683 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>agacacaaaaacctgaactgtttcactgtttccatctgggaaactgaagaaatcttcagtattctcttccatggctctttcactggcttcaacacgcagtttcttgacgtgcaggcaatcttcaagccaccaaaggcgatgcgtggtggaatcccgatatgttttccacagtttggaaattctggaacattggagcaacatggatttgcaagaaacaggatatgggccctagatgaggagcatccaccattaaatcaaaatgataacaacagcaaagcttctgttgaccttatactaaagccatctgaagatgacctgaagtgctggccacatggttttgagttccgcctgagagtttctcttacaaaggatgggaacctgtcactagtatcacgcatcagaaatgttaatggcaagccattcagtttctcatttggttatcacacatatctgtctgtttctgacatcagtgaggtgaggatagaaggccttgagacacttgattatctcgataatcttagccagagagaacgttttacagaacaaggagatgccataacatttgaatcggaggtgaaaaatgtttga</cdnaseq>

Protein Sequence

<aaseq>RHKNLNCFTVSIWETEEIFSILFHGSFTGFNTQFLDVQAIFKPP KAMRGGIPICFPQFGNSGTLEQHGFARNRIWALDEEHPPLNQNDNNSKASVDLILKPS EDDLKCWPHGFEFRLRVSLTKDGNLSLVSRIRNVNGKPFSFSFGYHTYLSVSDISEVR IEGLETLDYLDNLSQRERFTEQGDAITFESEVKNV</aaseq>

Gene Sequence

<dnaseqindica>589..759#885..1048#1309..1443#1545..1662#gtgtgcgtctctccttctcctctactctctcttcacgcgggctggctggctggctgttgatgagcatggggcactacaccaacctgacggatccgaggacggagctggaggtggtcagggactggaacggcgtcgaccaggtcgtgctccgctcgccgcggggcgcctacgcgcgggtgagcaggtttttgcgaatggattttgatcggcttggcattgagtcctttggtttggtttggtgcgattctgatggctttgttttcttcgtcgtggtgtgtgttttgcaggtgagcctgcacggcgggcaggtcctctcctggaggaacgaccgcggcgaggagcttctcttcaccagcagcaaggtgacgttttttttttttcaattcatttttcgattcttcagtgctctgcaaccgggttcacattactgcgattagcctagggaagtgtatttcgcaagttcaattgattgcagtagaattcaaactgtacgctcgcgggatatgttcttggattgattctgtttgagaagtgtgtactctgaacattaaactgtacttgtggaaggacagttcagacgggctctgaagacacaaaaacctgaactgtttcactgtttccatctgggaaactgaagaaatcttcagtattctcttccatggctctttcactggcttcaacacgcagtttcttgacgtgcaggcaatcttcaagccaccaaaggcgatgcgtggtggaatcccgatatgttttccacaggtatcatagtcttccattgcactgaagatttgtattatatactgttacaaataggatgccaattgataaggaagctagcttcccttctttttggtcttttctgatatccacaagactcactgcagtttggaaattctggaacattggagcaacatggatttgcaagaaacaggatatgggccctagatgaggagcatccaccattaaatcaaaatgataacaacagcaaagcttctgttgaccttatactaaagccatctgaagatgacctgaagtgctggccacatgggtatgcatttgtttttgtccaatatgtatttccttttctcttatagcacgcctttttgttagtaagggccatatgtcaaagttttgttatgtactgcatcatgggggtaattagttgaacagcctaatcctggcacttttgatgataatagtcaggagaatattttatttcagggaggttgttgaacatttgcacctcatctcgttgttaatgctgactgaatttgattttatgtatgatcctgcaatatttgatttcagttttgagttccgcctgagagtttctcttacaaaggatgggaacctgtcactagtatcacgcatcagaaatgttaatggcaagccattcagtttctcatttggttatcacacatatctgtctgtttctgacatcaggtcaggcatttcacccaacattctttttgtacttcaaccactttttgttggtgccatataatattttgaagatgacagattatatatcttgttaattccagtgaggtgaggatagaaggccttgagacacttgattatctcgataatcttagccagagagaacgttttacagaacaaggagatgccataacatttgaatcggaggtgaaaaatgtttgaataatcatatgcgctatatactttgatctactgattccgcaaatcttgttttgacattttgttgtaaaaatttacttgccacatcataaagtccaagatttacggtgttagcacctggtctatgtgcaaacatatgcaggttgaccgagtctatgttagctcaccaaatgtaatagctgttctggaccatgagaagaaacgcacatttgtcataagaaaggaaggactgcctgacgttggtaagacacaatattctctttgccacctaaccatggtaactttgcttgaaaaatttccatcatattcgctttattcctcccagttgtgtggaatccgtgggaaaagaaatcgaaaaacatcgtggacttcggcgatgaggagtacaaacagatgctgtgcgttgatgcggctgcagcggagagacaaatcactctgaaaccgggagaggagtggacagggaagcttgagctttctgaagttccatcgactaactgcagtggccatcttgatcaacccggtatcatcatttagaatatggcttgatagtttagaattttaccattttccttttttacatgagatcgatatgctcctcctctgccatcttggtaaaaattcttcttgtacgtgtacaaagattttaccatcttggtcagcggttcgttttaagcttatgccagagtcatcttgtttgttttggtttctgtgataccaatacatgtgggcgcaagatatactgaacttttctgatc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0569400, RefSeq:Os05g0569400