Os09g0559000

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Revision as of 07:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0559000| Description = Zinc finger, RING-type domain containing protein| Version = NM_001070450.1 GI:115480642 GeneID:4347839| Length = 157...")
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Gene Name

Os09g0559000

Description

Zinc finger, RING-type domain containing protein

Version

NM_001070450.1 GI:115480642 GeneID:4347839

Length

1578 bp

Definition

Oryza sativa Japonica Group Os09g0559000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:23052050..23053627

Sequence Coding Region

23052050..23053627

Expression

GEO Profiles:Os09g0559000

Genome Context

<gbrowseImage1> name=NC_008402:23052050..23053627 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:23052050..23053627 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtccggctacagcgacgtcgacgacgactacttcggcgactccgacgaggattatggcgacgacggcgattacatggatgacgatggcgacgactatggtgggcaggtggtcgaggaaacggaggcgccggcgatggagaagacgtacgttgttctaaccgaggacgacgtacgcgcgcggcaggaggaggacattgccaaggtgtgcgaggtgctctcgctctcgccgggcgccgccgccgtcctcctccggctgtacaggtggagggccgtcctgctccaggaggagtggttcctggacgagcgccgcatacgcgacgccgccggcctcctgccggcggacggcggcggcggcgaggtgcccgcgcgggtcaaccggcggcggctcacctgcgccatctgcttcgacgtgttcgacaccggcgggatgaggtcggcggggtgctcccacttctactgcgtctcctgctggcgcgggtacgtccgcgcggcggtgggcgacggcgcgcggtgcctgtcgctccggtgcccggatccgtcgtgcccggcggccgtcgtgcgcgagctggtcgacgcggtggccgacggcgaggacagggagcggttcggctggttcgcgctccggtcgtacgtggaggagagcgccgggatgaggtggtgcccggggcccgggtgcagccgcgccgtggagttcgtgggcggcggcgacggcgaggagagcagcgaggtgttctgctcgtgcgggcacgggctgtgctggcggtgcggcgaggaggcgcaccggccggtgtcgtgcaagacggtggcgaagtgggtggagaagaacagctcggagtcggagacggcgacgtggctgctcgcccacacaaagcactgccccaagtgccggctgccgatcgagaagaacctcgggtgcatgcacatgacatgccggccgccgtgcctccacgagttctgctggatctgcctcaagccatggcacggccacgcggcgtgctcccggtaccagcccaacggcacggtggtggcgctggccggcgccaacgccgacgacgagcggcggcggcaggccaaggcgtccctggacaggtacctctaccactacgagcggtgggacgccaacctcaagtcgctgcgcgtggcgctccgcgacatggagagcctggagcggtcggagctggaggcgatggcctcggcggcgggcgtgccggcgacggagatgggcttcgtgacggaggcgtacgagcaggtcggcgaggggcggcgggtgctcggctgggcgcacgcctacggctactacctcgacccggaccgcgacttcaccaagcggcagctgttcgagtacctgcaggaggacgccaacgcgtcgctggagcggctgcacggctgcgccgagagggagaggagggagctcttcgccgccggcgccgacgacaaggccgccgtcgacttcgacaagtacagggcgtacagggagaagctcgccgggctcaccagggtgacgcggcaatactttgggaacctcgtcaaagcgttcgagaccgacctggccgaggtctcctcctctagttaa</cdnaseq>

Protein Sequence

<aaseq>MESGYSDVDDDYFGDSDEDYGDDGDYMDDDGDDYGGQVVEETEA PAMEKTYVVLTEDDVRARQEEDIAKVCEVLSLSPGAAAVLLRLYRWRAVLLQEEWFLD ERRIRDAAGLLPADGGGGEVPARVNRRRLTCAICFDVFDTGGMRSAGCSHFYCVSCWR GYVRAAVGDGARCLSLRCPDPSCPAAVVRELVDAVADGEDRERFGWFALRSYVEESAG MRWCPGPGCSRAVEFVGGGDGEESSEVFCSCGHGLCWRCGEEAHRPVSCKTVAKWVEK NSSESETATWLLAHTKHCPKCRLPIEKNLGCMHMTCRPPCLHEFCWICLKPWHGHAAC SRYQPNGTVVALAGANADDERRRQAKASLDRYLYHYERWDANLKSLRVALRDMESLER SELEAMASAAGVPATEMGFVTEAYEQVGEGRRVLGWAHAYGYYLDPDRDFTKRQLFEY LQEDANASLERLHGCAERERRELFAAGADDKAAVDFDKYRAYREKLAGLTRVTRQYFG NLVKAFETDLAEVSSSS</aaseq>

Gene Sequence

<dnaseqindica>1..1578#atggagtccggctacagcgacgtcgacgacgactacttcggcgactccgacgaggattatggcgacgacggcgattacatggatgacgatggcgacgactatggtgggcaggtggtcgaggaaacggaggcgccggcgatggagaagacgtacgttgttctaaccgaggacgacgtacgcgcgcggcaggaggaggacattgccaaggtgtgcgaggtgctctcgctctcgccgggcgccgccgccgtcctcctccggctgtacaggtggagggccgtcctgctccaggaggagtggttcctggacgagcgccgcatacgcgacgccgccggcctcctgccggcggacggcggcggcggcgaggtgcccgcgcgggtcaaccggcggcggctcacctgcgccatctgcttcgacgtgttcgacaccggcgggatgaggtcggcggggtgctcccacttctactgcgtctcctgctggcgcgggtacgtccgcgcggcggtgggcgacggcgcgcggtgcctgtcgctccggtgcccggatccgtcgtgcccggcggccgtcgtgcgcgagctggtcgacgcggtggccgacggcgaggacagggagcggttcggctggttcgcgctccggtcgtacgtggaggagagcgccgggatgaggtggtgcccggggcccgggtgcagccgcgccgtggagttcgtgggcggcggcgacggcgaggagagcagcgaggtgttctgctcgtgcgggcacgggctgtgctggcggtgcggcgaggaggcgcaccggccggtgtcgtgcaagacggtggcgaagtgggtggagaagaacagctcggagtcggagacggcgacgtggctgctcgcccacacaaagcactgccccaagtgccggctgccgatcgagaagaacctcgggtgcatgcacatgacatgccggccgccgtgcctccacgagttctgctggatctgcctcaagccatggcacggccacgcggcgtgctcccggtaccagcccaacggcacggtggtggcgctggccggcgccaacgccgacgacgagcggcggcggcaggccaaggcgtccctggacaggtacctctaccactacgagcggtgggacgccaacctcaagtcgctgcgcgtggcgctccgcgacatggagagcctggagcggtcggagctggaggcgatggcctcggcggcgggcgtgccggcgacggagatgggcttcgtgacggaggcgtacgagcaggtcggcgaggggcggcgggtgctcggctgggcgcacgcctacggctactacctcgacccggaccgcgacttcaccaagcggcagctgttcgagtacctgcaggaggacgccaacgcgtcgctggagcggctgcacggctgcgccgagagggagaggagggagctcttcgccgccggcgccgacgacaaggccgccgtcgacttcgacaagtacagggcgtacagggagaagctcgccgggctcaccagggtgacgcggcaatactttgggaacctcgtcaaagcgttcgagaccgacctggccgaggtctcctcctctagttaa</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0559000, RefSeq:Os09g0559000