Os05g0570900

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Revision as of 10:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0570900| Description = Cupredoxin domain containing protein| Version = NM_001062904.1 GI:115465538 GeneID:4339662| Length = 637 bp| Defini...")
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Gene Name

Os05g0570900

Description

Cupredoxin domain containing protein

Version

NM_001062904.1 GI:115465538 GeneID:4339662

Length

637 bp

Definition

Oryza sativa Japonica Group Os05g0570900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28525081..28525717

Sequence Coding Region

28525081..28525442,28525534..28525717

Expression

GEO Profiles:Os05g0570900

Genome Context

<gbrowseImage1> name=NC_008398:28525081..28525717 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:28525081..28525717 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagcaggacgcagtacgccttcttgctcctctcggccttcatggcctccctcttcgccggctcggccgccggagtttaccacatcatcggcgccggcaaggggtggcggatggctcccaacaagacctactacgcggactgggctcgcaccaggaacatcagcgtcggcgacaagctcatgttcctgtaccggagcggggtgtacaacatcgtggaggtgccgaccaaggagctgttcgacgcgtgcagcatgaggaacatcacaaaccggtggcagaacgggccgaccatcatcgagctcacccagcccgggccgcgctactacttctgcggcgtcggcaagcactgcgaggaaggcgagaaggtggccatcaacgtctccgtctccgcgcccacgttgcccgactccgacgccgacgccgacgacgacgacgcggacgacagcgacagctcggccgccacgccggccaccgccgccgaccttctcatctacctcgccggcctcgccgcgtgcttgctgccggcattgttgctaatatga</cdnaseq>

Protein Sequence

<aaseq>MASRTQYAFLLLSAFMASLFAGSAAGVYHIIGAGKGWRMAPNKT YYADWARTRNISVGDKLMFLYRSGVYNIVEVPTKELFDACSMRNITNRWQNGPTIIEL TQPGPRYYFCGVGKHCEEGEKVAINVSVSAPTLPDSDADADDDDADDSDSSAATPATA ADLLIYLAGLAACLLPALLLI</aaseq>

Gene Sequence

<dnaseqindica>276..637#1..184#atggcgagcaggacgcagtacgccttcttgctcctctcggccttcatggcctccctcttcgccggctcggccgccggagtttaccacatcatcggcgccggcaaggggtggcggatggctcccaacaagacctactacgcggactgggctcgcaccaggaacatcagcgtcggcgacaagctcagtgagcatatgcattgagaattcgcaattttatctgatcttttggcgaaaaatttgaagtgtttgggtgaatcttggaacaatctttgcagtgttcctgtaccggagcggggtgtacaacatcgtggaggtgccgaccaaggagctgttcgacgcgtgcagcatgaggaacatcacaaaccggtggcagaacgggccgaccatcatcgagctcacccagcccgggccgcgctactacttctgcggcgtcggcaagcactgcgaggaaggcgagaaggtggccatcaacgtctccgtctccgcgcccacgttgcccgactccgacgccgacgccgacgacgacgacgcggacgacagcgacagctcggccgccacgccggccaccgccgccgaccttctcatctacctcgccggcctcgccgcgtgcttgctgccggcattgttgctaatatga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0570900, RefSeq:Os05g0570900