Os09g0559100

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Revision as of 07:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0559100| Description = Zinc finger, C6HC-type domain containing protein| Version = NM_001070451.1 GI:115480644 GeneID:4347840| Length = 177...")
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Gene Name

Os09g0559100

Description

Zinc finger, C6HC-type domain containing protein

Version

NM_001070451.1 GI:115480644 GeneID:4347840

Length

1777 bp

Definition

Oryza sativa Japonica Group Os09g0559100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:23054680..23056456

Sequence Coding Region

23054680..23055829,23055867..23056456

Expression

GEO Profiles:Os09g0559100

Genome Context

<gbrowseImage1> name=NC_008402:23054680..23056456 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:23054680..23056456 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagcgacggcgaggacgacgctcagagctacgaaagctactataccgacgatggcgacgattacaccgacgaggtggacagcaacgtcgacgacgacggcgagagttgggatctggaggaagaggaggtagatgacgacgacgacgacgaggccaagaaaaagaaggcggccgccgccgtcaacctcaccaagatcgacaggaggtaccggaatctgtccgaggagcaagtccgcgcgcggcaggacgcggacacggccaacgtcggcgagctcttcgcgatcccgccggggttcgccgccgtcctcctccggcactacaagtggagcctcgtcgagctccaggacaggctgttctgcgacggcgaccgagccggcgccgccaccggcgtggcgctcggcggcgcccccgtgtcgcgcaacgcccacccgctcgtctgcgccatctgcttcgacgagcaccccgccggcgagatgagatcggccgggtgctcccacttctactgcgtcggctgctggcgcgggtacgtccacgcggcgcctgtcgttccggtgcccggacccagcgtgctccgccgccgtggtgcagcccggtacgcgacgttcttgctccggtcgtacgtggaggagggcacgaggatcaagtggtgcccggggcccgggtgcaccctggccatcgagttcgtcggcggcggcggcggcgaggagaagcaggacgacgtggagtgcaggcacgggcacgggttctgcttccggtgcggcgaggaggcgcaccggccggtgtcgtgcgagacggtgtacgcgtggtcggagaagaacgccatgaagtccgagacggcgagctgggtgctggcgaacacgaagcactgccccaagtgccggctgccgatcgagaagaaccgggggtgcatgcacatgacgtgccggccgccatgcctgcacgagttctgctggctctgcctcagcccgtggagcgatcaccggagcagcgagtactacaactgcaacgtctacgacgcggccaaggccaacggcgaggccagcgacgacaagcggcggcgggagcagggcatggcgtcgctggacaggtacatgcacttctacgagcggtgggcggcgcacgggaaggcgcggcagagcgcggtggacgacatggccggcctcgacgcctgcgccgagaagctgtccgccgcggtggccatgccggtgacggagctctgcttcctggcggaggcgtaccagcagatcgccgagtgccggcggctgctccggtggacgtacgcgtacgggtactaccacctgggcacggggctcgacggcgacgaggagcggcgcaccatggtggagtgcgcgcagggggaggccgagcggcagctggagaagctgcacgactgcgccgagcacgagagggaggagctcctcgccgaggtggaacgaaccatcaagttgaacgctatcctcaaggacaacgacggcgaggagtcgaagaagaagatggaggataaggccggcgagatggtcgacatggtcgtggcttaccggcagaagctctccgggctcaccggcgtctgcaagatcttcttccgtaacctcgtcaagacgttccaggacggcctgttggaggtgggacctgctgttgccgccgccgccgcagccgccgtagctacaggtccggccgagagctccgacgatcctgttgatcctcttcagcctcttcatcaagacgacagctcgtag</cdnaseq>

Protein Sequence

<aaseq>MASDGEDDAQSYESYYTDDGDDYTDEVDSNVDDDGESWDLEEEE VDDDDDDEAKKKKAAAAVNLTKIDRRYRNLSEEQVRARQDADTANVGELFAIPPGFAA VLLRHYKWSLVELQDRLFCDGDRAGAATGVALGGAPVSRNAHPLVCAICFDEHPAGEM RSAGCSHFYCVGCWRGYVHAAPVVPVPGPSVLRRRGAARYATFLLRSYVEEGTRIKWC PGPGCTLAIEFVGGGGGEEKQDDVECRHGHGFCFRCGEEAHRPVSCETVYAWSEKNAM KSETASWVLANTKHCPKCRLPIEKNRGCMHMTCRPPCLHEFCWLCLSPWSDHRSSEYY NCNVYDAAKANGEASDDKRRREQGMASLDRYMHFYERWAAHGKARQSAVDDMAGLDAC AEKLSAAVAMPVTELCFLAEAYQQIAECRRLLRWTYAYGYYHLGTGLDGDEERRTMVE CAQGEAERQLEKLHDCAEHEREELLAEVERTIKLNAILKDNDGEESKKKMEDKAGEMV DMVVAYRQKLSGLTGVCKIFFRNLVKTFQDGLLEVGPAVAAAAAAAVATGPAESSDDP VDPLQPLHQDDSS</aaseq>

Gene Sequence

<dnaseqindica>628..1777#1..590#atggcgagcgacggcgaggacgacgctcagagctacgaaagctactataccgacgatggcgacgattacaccgacgaggtggacagcaacgtcgacgacgacggcgagagttgggatctggaggaagaggaggtagatgacgacgacgacgacgaggccaagaaaaagaaggcggccgccgccgtcaacctcaccaagatcgacaggaggtaccggaatctgtccgaggagcaagtccgcgcgcggcaggacgcggacacggccaacgtcggcgagctcttcgcgatcccgccggggttcgccgccgtcctcctccggcactacaagtggagcctcgtcgagctccaggacaggctgttctgcgacggcgaccgagccggcgccgccaccggcgtggcgctcggcggcgcccccgtgtcgcgcaacgcccacccgctcgtctgcgccatctgcttcgacgagcaccccgccggcgagatgagatcggccgggtgctcccacttctactgcgtcggctgctggcgcgggtacgtccacgcggcgcctgtcgttccggtgcccggacccagcgtgctccgccgccgtggtgcgtgagctcgtcgacgaggtggccggcgacgcggacagagcccggtacgcgacgttcttgctccggtcgtacgtggaggagggcacgaggatcaagtggtgcccggggcccgggtgcaccctggccatcgagttcgtcggcggcggcggcggcgaggagaagcaggacgacgtggagtgcaggcacgggcacgggttctgcttccggtgcggcgaggaggcgcaccggccggtgtcgtgcgagacggtgtacgcgtggtcggagaagaacgccatgaagtccgagacggcgagctgggtgctggcgaacacgaagcactgccccaagtgccggctgccgatcgagaagaaccgggggtgcatgcacatgacgtgccggccgccatgcctgcacgagttctgctggctctgcctcagcccgtggagcgatcaccggagcagcgagtactacaactgcaacgtctacgacgcggccaaggccaacggcgaggccagcgacgacaagcggcggcgggagcagggcatggcgtcgctggacaggtacatgcacttctacgagcggtgggcggcgcacgggaaggcgcggcagagcgcggtggacgacatggccggcctcgacgcctgcgccgagaagctgtccgccgcggtggccatgccggtgacggagctctgcttcctggcggaggcgtaccagcagatcgccgagtgccggcggctgctccggtggacgtacgcgtacgggtactaccacctgggcacggggctcgacggcgacgaggagcggcgcaccatggtggagtgcgcgcagggggaggccgagcggcagctggagaagctgcacgactgcgccgagcacgagagggaggagctcctcgccgaggtggaacgaaccatcaagttgaacgctatcctcaaggacaacgacggcgaggagtcgaagaagaagatggaggataaggccggcgagatggtcgacatggtcgtggcttaccggcagaagctctccgggctcaccggcgtctgcaagatcttcttccgtaacctcgtcaagacgttccaggacggcctgttggaggtgggacctgctgttgccgccgccgccgcagccgccgtagctacaggtccggccgagagctccgacgatcctgttgatcctcttcagcctcttcatcaagacgacagctcgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0559100, RefSeq:Os09g0559100