Os05g0572700

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Revision as of 10:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0572700| Description = Similar to Protein phosphatase 2C| Version = NM_001062913.1 GI:115465556 GeneID:4339671| Length = 2210 bp| Definiti...")
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Gene Name

Os05g0572700

Description

Similar to Protein phosphatase 2C

Version

NM_001062913.1 GI:115465556 GeneID:4339671

Length

2210 bp

Definition

Oryza sativa Japonica Group Os05g0572700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28605395..28607604

Sequence Coding Region

28605548..28605858,28605950..28606055,28606832..28607560

Expression

GEO Profiles:Os05g0572700

Genome Context

<gbrowseImage1> name=NC_008398:28605395..28607604 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:28605395..28607604 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagggagacgggcgcgacggatgaggggcacgcgtgcgaagttgtagtagccggaggtgacggcaaggccgcggcggcacgccggcgccgacgtctcgagctccggcggctcgggctggcggcggaggatgatgcggcggcgaagagaatccggtcggtgaaggacgggtcgtcgtctgatgactcgtcgacggaggttgttccccggagctggccggcgtgcgtgtcgcacggctcggtgtcggtgatcgggcggcggagggagatggaggacgcggtggccatcgagcggacgttcatggcttcgacgggggatggtgcgggcgctatcaggggcggcggggagggcgaggaggacttcttcgcggtgtacgacggccacggcgggtcgcgggtggcggaggcgtgcaggaagcggatgcacgttgtgctcgcggaggaggtgagcctgcggcggctgcgggggcagagcgcgtcgggcggcgacgtgcgctggaaggaggcgatgttggccagcttcgcgaggatggacggcgaggtcgtcgggagcgtcgccgccgccgccccccgcgtcgacggcaccgagccgtcggggttcaggacggtgggctccaccgccgtggtcgccgtcgtgggacgccgccgcatcgtcgttgccaactgcggcgactcgcgcgccgtgctctcccgcggtggcgtcgcgctgccactctccactgaccacaagccagatcggcctgacgagttggaacgagtggaagcagctggaggcagagtcatcaactggaacggttaccgtgtccttggtgttttagccacttctagatccataggcgactactacctgaagccgttcgtgagcgcagagccggaggtgagggtggtggagaggacggacaaggacgagttcctgatcctggcgagcgacgggctgtgggacgtggtgtccaacgaggtggcgtgcaagatcgccaggaactgcctcaacggccgcgcggcctccatgttcccggagtccgtctccggcagctcggccgccgacgccgcggcgctcctcgccgagctcgccgtctcgcgcggcagcagggacaacatcagcgtcgtcgtcgtcgagctcaggcggctcaagagcagggcagcttga</cdnaseq>

Protein Sequence

<aaseq>MRETGATDEGHACEVVVAGGDGKAAAARRRRRLELRRLGLAAED DAAAKRIRSVKDGSSSDDSSTEVVPRSWPACVSHGSVSVIGRRREMEDAVAIERTFMA STGDGAGAIRGGGEGEEDFFAVYDGHGGSRVAEACRKRMHVVLAEEVSLRRLRGQSAS GGDVRWKEAMLASFARMDGEVVGSVAAAAPRVDGTEPSGFRTVGSTAVVAVVGRRRIV VANCGDSRAVLSRGGVALPLSTDHKPDRPDELERVEAAGGRVINWNGYRVLGVLATSR SIGDYYLKPFVSAEPEVRVVERTDKDEFLILASDGLWDVVSNEVACKIARNCLNGRAA SMFPESVSGSSAADAAALLAELAVSRGSRDNISVVVVELRRLKSRAA</aaseq>

Gene Sequence

<dnaseqindica>1747..2057#1550..1655#45..773#tttccctttgattcctccgttgctctctctactacgcgtgggacatgagggagacgggcgcgacggatgaggggcacgcgtgcgaagttgtagtagccggaggtgacggcaaggccgcggcggcacgccggcgccgacgtctcgagctccggcggctcgggctggcggcggaggatgatgcggcggcgaagagaatccggtcggtgaaggacgggtcgtcgtctgatgactcgtcgacggaggttgttccccggagctggccggcgtgcgtgtcgcacggctcggtgtcggtgatcgggcggcggagggagatggaggacgcggtggccatcgagcggacgttcatggcttcgacgggggatggtgcgggcgctatcaggggcggcggggagggcgaggaggacttcttcgcggtgtacgacggccacggcgggtcgcgggtggcggaggcgtgcaggaagcggatgcacgttgtgctcgcggaggaggtgagcctgcggcggctgcgggggcagagcgcgtcgggcggcgacgtgcgctggaaggaggcgatgttggccagcttcgcgaggatggacggcgaggtcgtcgggagcgtcgccgccgccgccccccgcgtcgacggcaccgagccgtcggggttcaggacggtgggctccaccgccgtggtcgccgtcgtgggacgccgccgcatcgtcgttgccaactgcggcgactcgcgcgccgtgctctcccgcggtggcgtcgcgctgccactctccactgaccacaaggtacgctacgtggcactccgtacaactacttctttataatgatatatggatggccaaatgttattcgtgtaatccatggtactcgtgtacatttagctctgattgccgtcaattaattttttggttagatccgtacgtggcatgcttactactccatagtactgtacctagtttgatctttcgaatgttcgccaaggacgcaggtagtaggaaattttgcccatgtaactatagcttgatgctaacagtgcattatgccattatcgtgtacttcaattcaaaatatttactgatactgtcgcttgggtggttgtggtaagtgcaagatctatttcatctctggctttacacgttgacagtctccttttactttgtcggttgaacagcacaactgcagggttaactccaaagcatggtagtagcagcagtacactactgttcgtcaatgagatgggttagtaggtctgatgcgtctcggccactaaatgtgccaaaagttagctgttgggcacagcgatcagctagcttacccccattctagaaccttgtctttttatgtttcccgtgccgccgttctgaaaaagatatgggttacaccacttactagcaacagtgtactgtttgcgctgttgtcgtaaacaggttgatgctccgattttgtgtcttcacttgagtggactctgatattattttaggatcccatcagtaaactggttcagatgtaacatgaattatgcagggtcataaactgaataatgcttgttttgactacgcagccagatcggcctgacgagttggaacgagtggaagcagctggaggcagagtcatcaactggaacggttaccgtgtccttggtgttttagccacttctagatccataggtaaaagcaaaaaaaagcccaatctaactcttgctgctcatagcattggcatatgtaaaactaacaaatgccaaggcatctcgaatttcaggcgactactacctgaagccgttcgtgagcgcagagccggaggtgagggtggtggagaggacggacaaggacgagttcctgatcctggcgagcgacgggctgtgggacgtggtgtccaacgaggtggcgtgcaagatcgccaggaactgcctcaacggccgcgcggcctccatgttcccggagtccgtctccggcagctcggccgccgacgccgcggcgctcctcgccgagctcgccgtctcgcgcggcagcagggacaacatcagcgtcgtcgtcgtcgagctcaggcggctcaagagcagggcagcttgagcttcgacatcatccgcgatggaggcggcacgtcgctactaattaataagctactagtagctccctgtacattacgtcgatgatactattaatttgggcatcgcgcggcgagacgccggaattaaacggttccggcgatgaaggtttcgattg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0572700, RefSeq:Os05g0572700