Os05g0573000

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Revision as of 10:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0573000| Description = Conserved hypothetical protein| Version = NM_001062915.1 GI:115465560 GeneID:4339673| Length = 3334 bp| Definition ...")
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Gene Name

Os05g0573000

Description

Conserved hypothetical protein

Version

NM_001062915.1 GI:115465560 GeneID:4339673

Length

3334 bp

Definition

Oryza sativa Japonica Group Os05g0573000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28621296..28624629

Sequence Coding Region

28623429..28623794,28624292..28624594

Expression

GEO Profiles:Os05g0573000

Genome Context

<gbrowseImage1> name=NC_008398:28621296..28624629 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:28621296..28624629 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctcgtcgtcgctgcgggccgcggctgctcgttcctcttcctcgtctcctccgggctccggggaacccatcagctatcgcaggcacgcgggttggggcgactccgctctgcccccggatctccggcccggccggcggcgcgcggtgcggaccagctcgggttgggttgggttgggttggatttgggggcggggcagtgcgagctttgctgctgctgttgctgtgccggcgggatgcggtggtgcggcctgcggctgctcccactggtttgcctgcttgttattgctgcagccgcagaagaggataaaacaaatattctacaagcagacaaaaataatgacaacaacatagcacattcagatggtgggaagacaggacggcatgatgaaacaaatcctaatacagtacatcatgatgaaggaaagaatgaccctgatgggaacaacaagaaggacaaatcaacagaagttattagcacggcaaaatatgcggcagctgtgcatcatgtggataaagatatcaacacagcaaaatcctcgcatgtaacagacttctcacaagatcctcttatcaaggggtgtgacccatctcatacatgtgtaattgaaaataaaaagttcatcgcctgcttgaaagttcctggagaaggtgattttctcggcaactag</cdnaseq>

Protein Sequence

<aaseq>MLVVAAGRGCSFLFLVSSGLRGTHQLSQARGLGRLRSAPGSPAR PAARGADQLGLGWVGLDLGAGQCELCCCCCCAGGMRWCGLRLLPLVCLLVIAAAAEED KTNILQADKNNDNNIAHSDGGKTGRHDETNPNTVHHDEGKNDPDGNNKKDKSTEVIST AKYAAAVHHVDKDINTAKSSHVTDFSQDPLIKGCDPSHTCVIENKKFIACLKVPGEGD FLGN</aaseq>

Gene Sequence

<dnaseqindica>836..1201#36..338#tcccccttcccaagtcccaactgctttctcgtcggatgctcgtcgtcgctgcgggccgcggctgctcgttcctcttcctcgtctcctccgggctccggggaacccatcagctatcgcaggcacgcgggttggggcgactccgctctgcccccggatctccggcccggccggcggcgcgcggtgcggaccagctcgggttgggttgggttgggttggatttgggggcggggcagtgcgagctttgctgctgctgttgctgtgccggcgggatgcggtggtgcggcctgcggctgctcccactggtttgcctgcttgttattgctgcagccgcagaagaggtaaggtgtaatatcttccaaatttgtaagtattatttgcattaagtaactggagcaagtaaggtatagatagatggctatagatgcacagatttatatacgacttggttgaatgattactgattactaattaacttgtgcttacgttggctcattttagttctgacgaaacataaaagctgtcatcccttctgtatttgggatgacttgaatattagatggcgagatcattgctggtgatggtagctgtttatgcttcaatccatcggcaatgcatctctatcgcctttttgtgcactctagagttcgtgcacttatttgtgattctcaagtcgcatgaaagatttcgttgctctcacttaacttgtgatggtcagtcaaagctcaattcaccaatacctaccatgaaaacttaattcgatccagtgactaacaaatgccataatctgttttgttttcattgttgttgctgatatgttgtttcattttgaatttaggataaaacaaatattctacaagcagacaaaaataatgacaacaacatagcacattcagatggtgggaagacaggacggcatgatgaaacaaatcctaatacagtacatcatgatgaaggaaagaatgaccctgatgggaacaacaagaaggacaaatcaacagaagttattagcacggcaaaatatgcggcagctgtgcatcatgtggataaagatatcaacacagcaaaatcctcgcatgtaacagacttctcacaagatcctcttatcaaggggtgtgacccatctcatacatgtgtaattgaaaataaaaagttcatcgcctgcttgaaagttcctggagaaggtgattttctcggcaactagtcttctctaatctctgttagtgcaccatcattgttgtagtatagcagtatacctgtcttcacgaaaagttctcatttcctttttgacagatcgtttgcaaattgtgttatggcagttattttatctttgatttgaccttgccttaattagtgctaccaaatactgggtttgttgataaaaagattgacacgtaaattggtctgcaactgtaattttccccagtcagcaattatttttgaccaattgcaattcactattgtcaacttatagccacgactagtgctgatgaagtgacaattgattgcgtagttggagctatctatactaaccaaaaacacaatgtctgggaccaaattgaatatgcaatacaactgctgtatcacaagcaaattttgcccctgacgaatttaagcaaataatgtttctgcaaaagtacctgtgatgttatcacctacctaaaaaatactttgcaaagatatattttcattgttttttctctgaaggttttgcatcacatatggatatagtcgtgttagttcttattaattagatttttctatgttttgcacataaataacttgttaccgttgaaatcagattcattagctctatcacttctgatggacaacaaaggcatggacccactttatgttggtattacaactccagaatttgtcacttcagctgaagacaccatccatgtccaagcaaatgatcataatgaggtgagctaatgcaaatgagtatcttgaagataattatagtaatgagattttctggcttaacttttctttatgcaatatttgcatggtgttacttccacacatgttatttcagaagagactgtcttttatattctttattgatatgaaagtttttccagcgagcttttgagaggattatactgcaggttttctggcttattttttcccatatgtactatctactgtatgtgttgtttcaaaatagagtagctgttttttgcaagcttatagaaggatagttgctctttaccaagatcctggcttcatggtgtcattaatttatgttttgtcatataattggttcgtgagttatatatttcacgtgaactgcggtaggttattcccatattgatttatatacatgcataattgcattagcttattttgagttcttgttgatagtgtatctcaggattagcagaatgtcagtatactattgctgttcttatcagcttttattcaaggggaactggatctttctcatgctgtttcaatgttttcaatcgatgtactgatcttcttttttattttcatattgttaatttagacacaggtgactatttttaacaacggtgcaccaaacatgacaataattcttagagttgctgaagagacctgcaatattagcattcaccgagcaattgcgagggagataagtcaagtaatgccaatgcggcttacctcaaaatacatgttagtgcctgtttttcttcttattggagctgtggtagcatgcattaaacttcggagaagaggtatccaagatggtggacctgcataccagaagcttgatgcggcggagcttcctctttcgactggagggaagaaagaagcagatcaatctgatcagtgggatgacaactggggagacgagtgggatgatgaggcgccattgacgccaaccagacatatgcccaacctatcatccaaaggtctagcttcaaggagatctaccaaagatggctggaaagactaatgacaatatactcccttttcatggattggaaaaatagttccaatgcctatatcatatgatttttctgttccattatctgaaagaatatatatcctttttgccatctttataataggaaaattttgttctcttgctaccttttgcttgatttctggagtgtataagaagagactacaggggctaagatatactggttcagtttgtgcatttgttcaccaatgtagatatgtgcacctgatatgttccctacaactaagggatctccagagcttcgcttcacttgtgcatggattccaactgaggctccaacttcgtcttgcaatcatgaaagttggatgagagatccaccgaacaatgaacaaattgttgagatgaatgctatatctttcattg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0573000, RefSeq:Os05g0573000