Os05g0574600

From RiceWiki
Revision as of 10:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0574600| Description = Similar to Fatty acid elongase 1-like protein| Version = NM_001062926.1 GI:115465582 GeneID:4339684| Length = 2327 b...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0574600

Description

Similar to Fatty acid elongase 1-like protein

Version

NM_001062926.1 GI:115465582 GeneID:4339684

Length

2327 bp

Definition

Oryza sativa Japonica Group Os05g0574600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28706804..28709130

Sequence Coding Region

28707015..28708577

Expression

GEO Profiles:Os05g0574600

Genome Context

<gbrowseImage1> name=NC_008398:28706804..28709130 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:28706804..28709130 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgagcagcagcagcagcaagcgccgctgctgcagaggccagccgctgcaccgccgtcgtcgagccggctgccggacttcaagcaatcggtgaagctcaagtacgtgaagctggggtaccactacctcatcacccacggcgcgtacctcctgctcgccccgctcccgggcctcgtggcggcgcacctctccaccttcacgctgggcgacctcgccgacctgtggcaaaacctccagtacaacctcgtctccgtgctcctctgctccacgctgctggtgctcgtctccaccgcctacttcctcacgcgcccgcgccccgtctacctcgtcgacttcgcgtgctacaagcccgacgacgagcgcaagtgcagccgcgcgcgcttcatgaactgcaccgagcggctcggcacgttcacgccggagaacgtcgagttccagcgcaagatcatcgagcgctcgggcctcggcgaggacacgtacctccccgaggcggtgctcaacatcccgcccaacccctccatggccaacgcgaggaaggaggccgagatggtcatgtacggcgcgctcgacgagctgctcgccaagaccggcgtgaaccccaaggacatcggcatcctggtcgtcaactgcagcctcttcaacccgacgccgtcgctgtccgccatggtggtgaaccactacaagctgaggggcaacgtcgtcagctacaacctcggcggcatggggtgcagcgccggcctcatctccatcgacctcgccaaggacctcctgcaggtgtaccccaacacgtacgccgtggtgatcagcatggagaacatcacgctcaactggtacttcggcaacgaccgctccatgctcgtgtccaactgcctcttccgcatgggcggcgcggcgatcctcctctccaaccgcggctccgcgaggcggcgctccaagtaccagctggtgcacaccgtgcgcacgcaccgcggcgccgacgaccggtgcttcggctgcgtgacgcagcgggaggacgctgacgggaagaccggcgtgtcgctgtccaaggacctgatggcggtggccggcgaggcgctcaagaccaacatcaccacgctgggcccgctggtgctccccatgtcggagcagctcctcttcttcgcgacgctcgtcacccgcaaggtgctgaagcggaaggtgaagccgtacatcccggacttcaagctggcgttcgagcacttctgcatccacgccggcggccgcgccgtgctggacgagctggagaagaacctgcagctgtcggactggcacatggagccgtcgcggatgacgctgcacaggttcgggaacacgtcgagcagctcgctgtggtacgagctcgcctacgccgaggccaaggggcggatcaagaagggggacaggacgtggcagatcgccttcggctccggcttcaagtgcaacagcgccgtgtggagggcgctccggtcggtgaacccggccaaggagaacaacttcaccaacccgtggatcgacgagatccaccgcttcccggtgcccgtccccaaggtgtcggccatatga</cdnaseq>

Protein Sequence

<aaseq>MAEQQQQQAPLLQRPAAAPPSSSRLPDFKQSVKLKYVKLGYHYL ITHGAYLLLAPLPGLVAAHLSTFTLGDLADLWQNLQYNLVSVLLCSTLLVLVSTAYFL TRPRPVYLVDFACYKPDDERKCSRARFMNCTERLGTFTPENVEFQRKIIERSGLGEDT YLPEAVLNIPPNPSMANARKEAEMVMYGALDELLAKTGVNPKDIGILVVNCSLFNPTP SLSAMVVNHYKLRGNVVSYNLGGMGCSAGLISIDLAKDLLQVYPNTYAVVISMENITL NWYFGNDRSMLVSNCLFRMGGAAILLSNRGSARRRSKYQLVHTVRTHRGADDRCFGCV TQREDADGKTGVSLSKDLMAVAGEALKTNITTLGPLVLPMSEQLLFFATLVTRKVLKR KVKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLHRFGNTSSSSL WYELAYAEAKGRIKKGDRTWQIAFGSGFKCNSAVWRALRSVNPAKENNFTNPWIDEIH RFPVPVPKVSAI</aaseq>

Gene Sequence

<dnaseqindica>554..2116#gatctctcccccccaagcaaaaagcccaacaaccgcccccgcgcgccgatggagacgagccgccgtcccgcccgtccgcgccttgcgtttctgaggccgttcaggcggaacgcatgagcaaggcgttcccccacggccggttgcttatcgcacagggcctttctgctacgccggcgcccgaccggctcggcgttttcgcggtgcgcgcgcgcgtggctggcatgcattatccgatacggatcgactcgatcgaccgaccagctggtgcgtacctcgattcggacacgggtgagttacgttacgtagaatcgtagatgatgttgtaatgtctgcgtttgtgtacttgtgctgtagtacaggtcgcaatcggactcctgttccgattaggaatattggtgatcggtgcatgcatctcttatccctctcgtctatataactcagtcaggggacaaacgagttcgtccaagtgcaagtaaccccacgttctttgtgcttgtgaccgcagtcgtggtttgcaatctttgtgttcggtgaggtttgtttgctgcatgccatggccgagcagcagcagcagcaagcgccgctgctgcagaggccagccgctgcaccgccgtcgtcgagccggctgccggacttcaagcaatcggtgaagctcaagtacgtgaagctggggtaccactacctcatcacccacggcgcgtacctcctgctcgccccgctcccgggcctcgtggcggcgcacctctccaccttcacgctgggcgacctcgccgacctgtggcaaaacctccagtacaacctcgtctccgtgctcctctgctccacgctgctggtgctcgtctccaccgcctacttcctcacgcgcccgcgccccgtctacctcgtcgacttcgcgtgctacaagcccgacgacgagcgcaagtgcagccgcgcgcgcttcatgaactgcaccgagcggctcggcacgttcacgccggagaacgtcgagttccagcgcaagatcatcgagcgctcgggcctcggcgaggacacgtacctccccgaggcggtgctcaacatcccgcccaacccctccatggccaacgcgaggaaggaggccgagatggtcatgtacggcgcgctcgacgagctgctcgccaagaccggcgtgaaccccaaggacatcggcatcctggtcgtcaactgcagcctcttcaacccgacgccgtcgctgtccgccatggtggtgaaccactacaagctgaggggcaacgtcgtcagctacaacctcggcggcatggggtgcagcgccggcctcatctccatcgacctcgccaaggacctcctgcaggtgtaccccaacacgtacgccgtggtgatcagcatggagaacatcacgctcaactggtacttcggcaacgaccgctccatgctcgtgtccaactgcctcttccgcatgggcggcgcggcgatcctcctctccaaccgcggctccgcgaggcggcgctccaagtaccagctggtgcacaccgtgcgcacgcaccgcggcgccgacgaccggtgcttcggctgcgtgacgcagcgggaggacgctgacgggaagaccggcgtgtcgctgtccaaggacctgatggcggtggccggcgaggcgctcaagaccaacatcaccacgctgggcccgctggtgctccccatgtcggagcagctcctcttcttcgcgacgctcgtcacccgcaaggtgctgaagcggaaggtgaagccgtacatcccggacttcaagctggcgttcgagcacttctgcatccacgccggcggccgcgccgtgctggacgagctggagaagaacctgcagctgtcggactggcacatggagccgtcgcggatgacgctgcacaggttcgggaacacgtcgagcagctcgctgtggtacgagctcgcctacgccgaggccaaggggcggatcaagaagggggacaggacgtggcagatcgccttcggctccggcttcaagtgcaacagcgccgtgtggagggcgctccggtcggtgaacccggccaaggagaacaacttcaccaacccgtggatcgacgagatccaccgcttcccggtgcccgtccccaaggtgtcggccatatgatccaaccacacgcgttggctgtttgcactgaaacattattactagcagtagcttagtagtagtagtagaaatgaactaggatctattcgttattgcttgtgtattgatctgatcatatctggttcgctgttcttatgtgaagttgctctgtcggtctggcatgtaagaaggtctgatcataagttcacttcaaaagttaatttacatcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0574600, RefSeq:Os05g0574600