Os05g0575400

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Revision as of 10:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0575400| Description = Cyclin-like F-box domain containing protein| Version = NM_001062932.1 GI:115465594 GeneID:4339690| Length = 3308 bp|...")
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Gene Name

Os05g0575400

Description

Cyclin-like F-box domain containing protein

Version

NM_001062932.1 GI:115465594 GeneID:4339690

Length

3308 bp

Definition

Oryza sativa Japonica Group Os05g0575400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28744869..28748176

Sequence Coding Region

28745630..28745681,28745807..28745913,28746663..28747637

Expression

GEO Profiles:Os05g0575400

Genome Context

<gbrowseImage1> name=NC_008398:28744869..28748176 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:28744869..28748176 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctgcgaaacgcaaccagaagcggcgccgccgccaaatcagagcccagaatgaactgattaggtggtgtaaaagaaagggatcaccttgtcagcatggtgattctcgagctgtcaaaacaatgagacgttctaccccatacccatgccttcctgaggacatctggcatcatatacattccctaatgccaatgcgtgatgctgcccgtgctgcttgtttgtctagaacctttttacagtcctggagaagtcatcccaatctcattttaaataaggatacaattggcttgaatgcgagtgcttgtggagggaatttcagccgcaaagttgaccatattatgaggaaccactcaggcattggcgtgaaaatattcaggcttgaataccttggcgtcgtggggtttgatgccagtcgctatcttgacagttggcttcaggtggttgttaagccagggattgaagagctgacccttgtgttgtgtaaaaccaagagagagtacaatttcccatgctcacttttatctgatgggattcaaaattcaattaggtacctcagactcgattggtgtgcccttcgtcccactgctgaactcggccccttgcaaagccttacaagcctgcgtctgcgttcggtgagtatcaggggggaagaattgcagtgtcttctttccaattctcctgcgttggagcagttgcgcatttctagttgcacggagatagtttgcttgaagataccttgctccctgcagaagctcagcaaccttactgttattggatgtgacagcctgaaagtattagagaacaaagctccaaatctctccagtttttttgtttctggatgctctaacctgagaatattagagaataaaactccaaatctctccagttttttctgtagaggagtcggggcaaagctctcacttggagaaacactgaaaatgaagaagctaggcatgggccgtgcgaatgctgtgcattatgctcgtgctgagctgccttccattatgccaaatcttgaaactcttaacatacgttcaggacctgaggtatgtatatatatatccagaagctttaggtgttatagactagtattacatatatatgcgtattacattagtcatacctgtgtatga</cdnaseq>

Protein Sequence

<aaseq>MPAKRNQKRRRRQIRAQNELIRWCKRKGSPCQHGDSRAVKTMRR STPYPCLPEDIWHHIHSLMPMRDAARAACLSRTFLQSWRSHPNLILNKDTIGLNASAC GGNFSRKVDHIMRNHSGIGVKIFRLEYLGVVGFDASRYLDSWLQVVVKPGIEELTLVL CKTKREYNFPCSLLSDGIQNSIRYLRLDWCALRPTAELGPLQSLTSLRLRSVSIRGEE LQCLLSNSPALEQLRISSCTEIVCLKIPCSLQKLSNLTVIGCDSLKVLENKAPNLSSF FVSGCSNLRILENKTPNLSSFFCRGVGAKLSLGETLKMKKLGMGRANAVHYARAELPS IMPNLETLNIRSGPEVCIYISRSFRCYRLVLHIYAYYISHTCV</aaseq>

Gene Sequence

<dnaseqindica>762..813#939..1045#1795..2769#agcccctcctttccttccatcgctgcaccaccgccgccaccgccaggttcgcgtcgccgacgtgccctacgccgctgctgttcgtcgcccggtctctagtttggctgacttctcgccgcagccggtcacatcacgcgtccttatcacacgctgctcttcaatctcctcctcccgccgccgccgccgccgccgtcatccgcctccccagaagctgcatctctagtccggtgagtccgatttcactcattcttctctgcaactcaaccgggcttgcagatttattgccgttgcaggagatttttagtttcgggagttgttatatcgagagatagtattgttctgcttatctaaacgacaagtttgcagcgcaaatgttacaatatggctaaattttatactcccattctctaacgattttccataggaggacgcaatttggagcaattcaagaagtcctgataggaaaaaggactcccattatcttaacgattttctataggagggcgcaatttggagcaattcaagaagtcctgataggaaaaggaagggaataaaaagagtccaggttcctcttgctcgtaccagggccatcgcaatcctttttatgcctagtcgaattttccgaaattgaggtcaaaattcaagtacaaaaacagatagtagtagataggagagaaatagtgatctgaaggaggggaaacggaagtgatttctcggtgagatctgacgaagaagagtcgtcgtcgacctactagttccacatgcctgcgaaacgcaaccagaagcggcgccgccgccaaatcagagcccagagtaagccaccttactcttactctgaactcaagagattgggccttcgtttcttccttttttctgcattcatgtatgagcaacctgcaaccatagccatccttatcctctttttttttgtgtcgcagatgaactgattaggtggtgtaaaagaaagggatcaccttgtcagcatggtgattctcgagctgtcaaaacaatgagacgttctaccccatacccatgccttcctgaggtactgctgtatgaaattctgatgatgcaggcttagattccaagcatgatattaccatgagtgatctgatagggctaattcttgggactatacttgaatacctgaatattacagtattgtttatataaacagaagtcagatatagtattttagtactgcaatgtggccacagtcctacactcgtactgaactagcagattctcttcgttctagttaccacttttctctctgcaaaggctggcagtattactaacaaatctcttcagaattttacctaagtgcgatgctttacatatttagtaccatgttcataaattggcataactggggtgctttagtgctatgctgcacttattagcattaagaaaaattggaaaaatattttttctttccacctgcttcacatttcgtacaagagtattggttttgctatgttgctaccttaatccagaacaaatggctagatttgctacagcaagtaaaagtattcttttaatccaagtcaaaagtatttttcatggtagttaattcgtgctagccattagcaactttatttcttctccttggaaaacccactaatgacactggtagcaaaaattctctatatgccatgtttacatttcactgcaccatctttctacgtaacgctgcatgccatgatgttctaccgtttttcgttctctaatggaagtaaccatttggatttacgactgcaatgttgatcttccatcccatgcttgtgtacgcaggacatctggcatcatatacattccctaatgccaatgcgtgatgctgcccgtgctgcttgtttgtctagaacctttttacagtcctggagaagtcatcccaatctcattttaaataaggatacaattggcttgaatgcgagtgcttgtggagggaatttcagccgcaaagttgaccatattatgaggaaccactcaggcattggcgtgaaaatattcaggcttgaataccttggcgtcgtggggtttgatgccagtcgctatcttgacagttggcttcaggtggttgttaagccagggattgaagagctgacccttgtgttgtgtaaaaccaagagagagtacaatttcccatgctcacttttatctgatgggattcaaaattcaattaggtacctcagactcgattggtgtgcccttcgtcccactgctgaactcggccccttgcaaagccttacaagcctgcgtctgcgttcggtgagtatcaggggggaagaattgcagtgtcttctttccaattctcctgcgttggagcagttgcgcatttctagttgcacggagatagtttgcttgaagataccttgctccctgcagaagctcagcaaccttactgttattggatgtgacagcctgaaagtattagagaacaaagctccaaatctctccagtttttttgtttctggatgctctaacctgagaatattagagaataaaactccaaatctctccagttttttctgtagaggagtcggggcaaagctctcacttggagaaacactgaaaatgaagaagctaggcatgggccgtgcgaatgctgtgcattatgctcgtgctgagctgccttccattatgccaaatcttgaaactcttaacatacgttcaggacctgaggtatgtatatatatatccagaagctttaggtgttatagactagtattacatatatatgcgtattacattagtcatacctgtgtatgattttagacgtgtcatatttgttatacaggcggtaaatacaccagtgctgcctaccaaattcctctacctcaagcacctgagcattagtttgatagcagtatcgacactttccccgtcctatgattatttttctctggtttctttccttgacgcttctccttcgttggaaacttttatcttggatgtaaggcactgtccattaactctgtcctgctaacatagctgttcactctgggtccatttatctcaatcgtgttctcctttccatcttcaggtgcagcagcgaagcatggagcatgaatcggtttttgcaaaatcctcgggtttgaggcaaattcctgaaaaccgccatgacagcctcaagactgtgaagatctctggtttctgctctgcaaagagcttggttgagctaacttgttatattctgaagaacgtggtgtcactcgagtctcttacattggacaccattcatggtgattgtaggtgttacctaaaaacttctccattttgtaatcacatagaggaggatattctcatgg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0575400, RefSeq:Os05g0575400