Os05g0577200

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Revision as of 10:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0577200| Description = Carboxylesterase, type B family protein| Version = NM_001062941.1 GI:115465612 GeneID:4339700| Length = 6374 bp| De...")
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Gene Name

Os05g0577200

Description

Carboxylesterase, type B family protein

Version

NM_001062941.1 GI:115465612 GeneID:4339700

Length

6374 bp

Definition

Oryza sativa Japonica Group Os05g0577200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28826869..28833242

Sequence Coding Region

28828791..28828952,28829057..28829147,28830221..28830361,28830466..28830531,28831086..28831223
,28831665..28831766,28831907..28831981,28832062..28832142,28832220..28832289
,28832504..28832580,28832941..28833182

Expression

GEO Profiles:Os05g0577200

Genome Context

<gbrowseImage1> name=NC_008398:28826869..28833242 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:28826869..28833242 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagcccgcgagtccggtctccggtgacgcgggccccgtggcggaggcggtacctccacgcggtgccccccaggtcctcgtgcgccggcgttccgtgcccttctcccccgactctccgctcgcccccggcagccgcgggggcggcgagaggaggtccacgttccgggaggacgtcagccatgccgccgccgagacgtacctcgtcacgcgcctcgccttcatcctcctccgatacctcggggtaggctaccggtggatttctcagctcgctgccctcataatatatgcaattttacttatgcccggtttcataagagttgggtattattatttcttttcaagacaagttttgaggagcgtgatctatggggatcaaccaagaaataggttggatctttacataccaagagaccccaaaaaacccagtccagttgttgcatttgttactggtggtgcatggatcattggttacaaggcgtggggtgctcttcttggaaggaggttagcagagcgaggaattatagttgcatgcattgattacaggaattttcctcaaggaacaataagtgacatggttagcgatgcttctgatgggatttcatttgtttgtgagactgttggtgcctatggaggagatcctaatcagatatacttaatgggtcaatcagcaggagcacatatcgcagcatgcgctcttttggaacaagcggctaaagaatctaggggagagcagatttcatggagtgttactcaaataaaagcatactttggtttgtctggaggatacaacattgaaaatttggttgatcatttccatgaacgtggtctttaccgttcaatatttctcagcataatggagggaaagaaatcattgccacatttctctccagaaactgttgccaagaaattatgtcctgaaacaatagctcttcttcctcagattgtgcttttgcatggaacggatgattattctataccattttctgctagtgaaacttttgcgggtgtccttaaacaagctggtgctaaagccaagttactactctatgaagggaaaacacatactgatgtatttttacaggatccactaaggggtggcagggacaaactggttgaagacgttatttctgttatccatgctgatgatgcagatgcacgtgagaaggatgcattggcacctatcccaggccggctggtttctgagtggcaaataaagctggcacaccgaattagtcccttctga</cdnaseq>

Protein Sequence

<aaseq>MQPASPVSGDAGPVAEAVPPRGAPQVLVRRRSVPFSPDSPLAPG SRGGGERRSTFREDVSHAAAETYLVTRLAFILLRYLGVGYRWISQLAALIIYAILLMP GFIRVGYYYFFSRQVLRSVIYGDQPRNRLDLYIPRDPKKPSPVVAFVTGGAWIIGYKA WGALLGRRLAERGIIVACIDYRNFPQGTISDMVSDASDGISFVCETVGAYGGDPNQIY LMGQSAGAHIAACALLEQAAKESRGEQISWSVTQIKAYFGLSGGYNIENLVDHFHERG LYRSIFLSIMEGKKSLPHFSPETVAKKLCPETIALLPQIVLLHGTDDYSIPFSASETF AGVLKQAGAKAKLLLYEGKTHTDVFLQDPLRGGRDKLVEDVISVIHADDADAREKDAL APIPGRLVSEWQIKLAHRISPF</aaseq>

Gene Sequence

<dnaseqindica>4291..4452#4096..4186#2882..3022#2712..2777#2020..2157#1477..1578#1262..1336#1101..1181#954..1023#663..739#61..302#gcggcaaccccaaatccctcgccaccaggagctagcatcgtcgtcgtcgtccgccccgcaatgcagcccgcgagtccggtctccggtgacgcgggccccgtggcggaggcggtacctccacgcggtgccccccaggtcctcgtgcgccggcgttccgtgcccttctcccccgactctccgctcgcccccggcagccgcgggggcggcgagaggaggtccacgttccgggaggacgtcagccatgccgccgccgagacgtacctcgtcacgcgcctcgccttcatcctcctccgatacctcgggtaacgtaatctgatactgtaccgatcgccattcggcaacacgccctcgtcgtctttggtctcactcctcctcacggacataccaataatgacctataagaaattaggaaatccccattgttaaaacagattgttgcatcaaagcaccttgcattttcaactaattcacttggatggcaagctaactctagcactgatgaactgaattttattatcttgtgaagtcatgcttcaaaacgcctaatatacattgcgttatcttcccaccaaaatctccaaaaaaaaaaaatccaaatgcatatacaatatattttcatctttgctgtatagatgtccctgatgttctttctatttttccagggtaggctaccggtggatttctcagctcgctgccctcataatatatgcaattttacttatgcccggtttcataagaggtagataaaaaaaagaaaatcatgtttacctttggcctcgttgaccttaccttttattacagatttctatgttgaacatgatggttagtcaatgttatgattgtaccaataagtgttctggcaaattagctcttcttggttccctttttacggaattgaaagcatggccatgattgtacatctaccaactaatttattatttattgattgccagttgggtattattatttcttttcaagacaagttttgaggagcgtgatctatggggatcaaccaagaaataggtatagaaactatctgctatataaacggaagaatctgattttggactttgctagagactcaatttcacactatacaggttggatctttacataccaagagaccccaaaaaacccagtccagttgttgcatttgttactggtggtgcatggatcattgggtgagtaaaattcttctgatgatgtattataagggtcttctgccatgatttgcccttttgatgacctcagttatatctagttacaaggcgtggggtgctcttcttggaaggaggttagcagagcgaggaattatagttgcatgcattgattacaggtgctcatactttgcatggattcctcatatatgattcttataattcttttttggtagatttttttttactgataagaatttactgattgatcgatttctttttgcttgcttgatgatatataaaagcatatgttttgcaggaattttcctcaaggaacaataagtgacatggttagcgatgcttctgatgggatttcatttgtttgtgagactgttggtgcctatggaggagatcctaatcagtaagtgatactttatcaaatcacaacaccctaataaagttactactgaaaaaaagtttcatgtatacatgaagtttttctaaacggttttcttgaatgaacaatgtacatgatttgaatgattatatttgaagtccatgctggtggttattgaatgaggacaagcacatagaagtttttttaaaaggttttctgggcatgcttctgttccgacataaattgtgtaagatatagaaatatgtgtcttattgaatggaaagctaaaatgcacagtatatgttatacttgcatctagacttaaccacattcatttctggaactgatgactgtattattcccatgcatcctaataatttcgtagttttccattattcttgctttgtatttttttactgatgattttagtgaaagacttaccattcatcgtgttaaatcctgcaggatatacttaatgggtcaatcagcaggagcacatatcgcagcatgcgctcttttggaacaagcggctaaagaatctaggggagagcagatttcatggagtgttactcaaataaaagcatactttggtttgtctggagggtgggatagctttatcatctaattttgattgattatatgtctgtatggttatcatcattattaaagaattgcttctcctgagtcttgattagttttctataccatgcacgttttggtctaatataaaacactaaacctgctatcatggcaacatcgcatgatttctttatgtgttcatttaagtgatcttctattgattctactcctgtgttagtctgattttgattgtgaagaaagtcggattttggcaattgtttagtttacatgatgattgacttataaactccgatgttgtgaaactggggctagtcctgctaaaaagcaatagatatctaccatttggtgttttgagtgcttgttttagatttgtacctcatgaagtgttttagtagctgagaaaacatatggtgccttttagaattttgaaccaacttctgcagtctcactttggcatttggatgcaacagaatgtgtaatgagatactaaataatcagagctagtgattctatgtttacatgacatatattctcattgctcaaattgctgtttgcagatacaacattgaaaatttggttgatcatttccatgaacgtggtctttaccgttcaatatttctcaggtaacagtgtaactgtacttttgatatggaagtgttgcttctactttccttaattcttaattagaactatacaaaactcaggaacttatgaaatgccttttcagcataatggagggaaagaaatcattgccacatttctctccagaaactgttgccaagaaattatgtcctgaaacaatagctcttcttcctcagattgtgcttttgcatggaacggatgattattctataccattttctgctaggtataattatattttatttccaggggaattaataattctctactaggtttgattatcttttctgttatgttgttttggggttcctctcttttacaagatatatgcgtcaaattaaaacgtcaagttccatacaagctgtctttctggacatattattgtaggcaaacactgcctattacttattaatttctcacttctatttttatatgcttctacattctgtaggcgcgtgtttggttttgggactatgtgggatgggatgacacaatccctgattttagggatggagtgatcctacttgcttgtttggtttataggatggaatgatcccaattttttgtttggtagaagggatggggtagggatgtgatgaacagcgtttgcaccacgttactcccagcgagaaaaggtctcgcagctcgcagcttgcagaggaaggagcggtgatcggcggcgcgggcggaaggaggagcggcgcgacatcggagacaatgacgatgtggacgtggtggccggagctagaggcatcggtccacggcgacgaggtcggaggcgcggctggttccggcaagccccgacctcaaggaggccagatccggtggcccccgacctctaggcaacctgattcggcagcgcggatgcggcgaggaggtcggggggggggggtgcgtggcttggaccggcctccaggcagaggaggaggtcagggcgcgtggtgacagcccgccatcgccgccagctatagctgctcccgacggcgatgcacacgacgcgcggtgaagtggcgcaactcacgctgtgcgctcgtcccaggtgggacaagctcgtccgaccgattttgctggatggcttggtcccggatctaagaggaatattcctctccatggacctacccctcactcaccactaaaccaaacacccctaaaagtgggtttgccccatcccatccttgcaaccaaacactacctaggtgttacaccgttatttgatccatctttctatacaagttaatccattcatgttgtatgttcaagctgctaagaactctttaactccgtatatcacatatgcagtgaaacttttgcgggtgtccttaaacaagctggtgctaaagccaagttactactctatgaagggaaaacacatactgatgtatttttacaggttagtcattttgaatatgaaggctggaatagttacaccaggattcaggatggccctctgtgcacaaatttgctggggaaccctaacatatcgttccgttgtaggatccactaaggggtggcagggacaaactggttgaagacgttatttctgttatccatgctgatgatgcagatgcacgtgagaaggatgcattggcacctatcccaggccggctggtttctgagtggcaaataaagctggcacaccgaattagtcccttctgaagaggtatcagttgtttacctttttttcacagaagttgtttaacgtatttgatctgccgtgcagtcaaataaatttcttcgtttagctttggtgctcacgggcatcttattattgatcttgcatcctaatgtgatagtatctacttgtgatagggctgcatacggataggttccaggccacattgacctgttgctaaatgtgcatgcacaattaagctgcgcttcagaagatttgttaatgctgaaccggacaaactaggtttgaacaatgaacatgcctttggaacacgttgaaaattcctttccccctccctcgtctctcctgagccctgagctgcgcctgcgagctgtggagcagggtttacattaccagcacggttaccggtcttatcccaggatacggtagtagaaaaaccacgataaccttcttaaattcaaataaacttaaaaaataatttgaatttttgatgaattttgcatggtttttacggttatcgcgcggtaaccgtgcttaccgctggggtgcggtaaccctagccccggcgatttgagaaaccctgctgtggagaccacaggaacagcaacatgctacagctaggaacgaaggagaagaggtgaatttaagcgtgatttgatcttctcaagagaggcagaggccataagaccagaccagcaacagtactaagctcgagaggagacagatgtagagtagctgtggcctgtgtgtgtgtctctctctctctcctagcggtagcatgttgtagcactggcactagccggggacgacgacgacgacgatgaggtcgctagtacggtgtgtcgcgtcgtcacctggacccggccactccggcgctgcagggcgctgcttccgtcgccacgcaccgtcgccgtcggcaccggtcggtcggccccctccgcggtcaaagctgcagctttcgctttggattttacccccctttgggccccgctttgcattgccaccgatcccgaggaaagcaaaaactgtgctggttcagcagccagcctctcctctcctcttttctttgcctcctctcgtctttctcctctgaaccctgcagccttcgcgctttagtttggatctgtgcagcgatcgatttgaaagaaagaaccaaacacagaaaagcaatgtgttgcatgatcggaatgaaccggtttgtgagagaggtaaaatgtgcattctctgaagattaaggccctgtttagatccatttgaaataacaaatggcaaatggcaaaagttttggtattgcaaaagtactagttggtatttagatgcatcctaaactttttccattctagcactaaagtgagagagagaaagaaagagggagcggtcccaaagcactttttggcacaatttgctactatggactagcaaatgccaattgccaaattgccaagttttgttactagtgtttagatccaaaatggcaaaaagtacttcaaaatggcaaaacttttgccattttggaggatctaaacagggcttaagaaaaagaactctgaaactctgaaatggttggtacatttaacattctctgatgaatatcaatgtactatactaccattcggcattcgagtttacttgtagctttgtgatcgtgttcgttgcttgaggcagtacggttagacaaagctgcatgtccatgtgttttgtgtattttaaggaagaatcttacttgtgggttgtatcatttcagcttgtgcaaagaaaagatgaaagattcctaattatagttttgagctatatgtcattcatgacgagtattgaaagattgctgattaggaacggagcccaatccaattgcagaagccgttgacatcacagggaatgcaaatgtggtgcggtgctgcactcatgtcgtctaagtttgttgggaactaatggccatttccaaagt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0577200, RefSeq:Os05g0577200