Os05g0579500

From RiceWiki
Revision as of 10:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0579500| Description = Conserved hypothetical protein| Version = NM_001062955.1 GI:115465640 GeneID:4339714| Length = 2307 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0579500

Description

Conserved hypothetical protein

Version

NM_001062955.1 GI:115465640 GeneID:4339714

Length

2307 bp

Definition

Oryza sativa Japonica Group Os05g0579500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28919989..28922295

Sequence Coding Region

28920073..28920134,28920345..28920636,28922046..28922057

Expression

GEO Profiles:Os05g0579500

Genome Context

<gbrowseImage1> name=NC_008398:28919989..28922295 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:28919989..28922295 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaggcgcgacggccaccatacgcacgacgcgacggactggtgcgtcgtggcggacaggtttgaggtggatccatggcgacgggtcggtggagaacaggacctgcagagcggcggcggcgccgtgaggctcagcttcgagacgcaccacggcggcggcgtggcaccttcgccggagttcgcggcgtgcgcggcgagctcctgcagcgcggaaatcatggtgttgctgctcctgcagcgcggcgagctcctggtgcaccatgaccggccgagccatcaccaccgccgttacttcccaacgccgcaaccagtcgaagccgccgccgcagttgaagttggatggggatttcaggcgttattatga</cdnaseq>

Protein Sequence

<aaseq>MARRDGHHTHDATDWCVVADRFEVDPWRRVGGEQDLQSGGGAVR LSFETHHGGGVAPSPEFAACAASSCSAEIMVLLLLQRGELLVHHDRPSHHHRRYFPTP QPVEAAAAVEVGWGFQALL</aaseq>

Gene Sequence

<dnaseqindica>85..146#357..648#2058..2069#ggaacgacgcgacggcctgagccgagacggctcggcgcgcagcggaaaaagcggcggcgctccgccagggtctcaccgccggcgatggcgaggcgcgacggccaccatacgcacgacgcgacggactggtgcgtcgtggcggacaggtgcgtggcggcggtgggcagctgctggtgcggctgcggcgacggtggcgcggacttggccgagctctgcgccgtggcggcggcggcggcgttgcagagcggctgcagcagcgggtggtggtggcgagcggctccatcaccattgtgatttgtgcattgcatttgatcgatttgttgccgttgattggtttcttgttgacgtgtgtgcaggtttgaggtggatccatggcgacgggtcggtggagaacaggacctgcagagcggcggcggcgccgtgaggctcagcttcgagacgcaccacggcggcggcgtggcaccttcgccggagttcgcggcgtgcgcggcgagctcctgcagcgcggaaatcatggtgttgctgctcctgcagcgcggcgagctcctggtgcaccatgaccggccgagccatcaccaccgccgttacttcccaacgccgcaaccagtcgaagccgccgccgcagttgaagttggatggggatttcaggtactgaggctgagggcattttcgtccttttgaaatttctctctcctctttttcactgaaaataataaaatattgcctcggatgtcctacagctaattacacaaattttatagtgcattggcagtgtcgtgttttttaggtgtcttctagctaattacatgatttttggatgtccgcaaattttgccaataagcaattagcaatgttcgttgcaatgacgtactactaatgaacttattagaacaagtgacaaggaaccgatctagttgcaacatcgtactggtaacttacagcaagcgacaatgaggttatctacttgtaaattttcagttgacctgccatgcagcaagcaagtactacattttgggtatttttctacacttgtatcaggggctaggacaagtaatttgatgcagctaaatcatctgttatccagaattccctgttgtcctctcaacaagcaggatttagaacatatagtgactaatgtgcacatcagataggaactgaccttaattgttttcatattgccattatgcgtggagccgtgtagccattgcttcctttgatctggatggatttgtcactttggccacgtttagagcctgcctacctcttgtgacagcttacttgttaaagtctgttccgccaaaatctgtcaaggaaaccaatgttattgtgaagaagaaatagtggtacgcgcacattagaaccttatcgtttgcactatatagaatcagtcgttgtgaaaatttaaatattaaattttaatttttgaagttttcttatctaaatttatttttcaacattgacattttaatcgctaaaggcacacgtatataaaaaagttttatctataaattaattttataatacatcgtacaaatgtactcaacatataattaaaagatggtggcattactatgactgaagaaacatgaggaatttgaaacctcacgccgacggttttctctacacaactctcagaaaatctacatgaaattttatataatagaacaaaaaaaaggcagagagaagaatctgctgcatacgaaattttatatgagaagagaaaaaagaggcagagcaaagaagctgcggcctgttactatgtcgtatttacaacgataatagaaacagctaaacacaactaaggtagatgggatcatgggaacaaacagaacaggagataacaattgctcgtgctgagatatttcgtcccgggaaagaagcaattgttaggagtattattatcttattgcagcgctaacttattttaggtgcatggcaagtatggagtgattgtggtgtgctgcagcaaatgttgaactttagcccatcatgttgctactgattgatcagtcttatcagttctgattgttttgtcttttcatatgcatttctgacaggcgttattatgactcaagaaacactattcgagaatcaacactactaccgtggtgacctgtgattttctggagggttgttccctgccttctctgcgaggttccattccataagctcaagacaaacctgctgtccgataggcagacctaaaagtgttatacgaatgtaaggcagtcctaattactcctactctacatcacccgaaagtatcttaagtaaattttcaaaaagaatagacgatcgattgaaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0579500, RefSeq:Os05g0579500