Os05g0581800

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Revision as of 10:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0581800| Description = Protein of unknown function DUF1296 family protein| Version = NM_001062968.1 GI:115465666 GeneID:4339729| Length = 8...")
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Gene Name

Os05g0581800

Description

Protein of unknown function DUF1296 family protein

Version

NM_001062968.1 GI:115465666 GeneID:4339729

Length

8216 bp

Definition

Oryza sativa Japonica Group Os05g0581800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29021721..29029936

Sequence Coding Region

29021886..29021965,29021996..29022126,29023318..29023361,29024427..29024496,29024599..29024722
,29025326..29025966,29027000..29027270,29027340..29027619,29027948..29028115
,29028773..29029264,29029338..29029595

Expression

GEO Profiles:Os05g0581800

Genome Context

<gbrowseImage1> name=NC_008398:29021721..29029936 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:29021721..29029936 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagaggcgggggcggccggggcgggggcgggggcggcggtgggagggtgcccttctacgccgcggcggcggcggcggagccggcgtcgaggaagctggtgcaggggcttaaggggatcctgaccgaccgctccgaggccgagatctacgccacgctcctggattgcggcatggaccccgacgtcgccgtcgagcgcctcatctcgcaagatccttttcatgaagtgagaagaaagcgtgacaagaaaaaggagatcaaagcacctcaggaaaccaggcctcggccattttataaacctgcatttcgaggatctaagactggaggagattcaactggcagtggtaaaggccctaccaagaaagaaacggagttacattctcttcctaaatcatcagtctctgattctgtgaaggaaagcaatccaactgagaagatttcagcagccgaccatgctactatcaatgacagtcttattttatcaagtggccaagctgatgcaaagtccactcctctccagcccccttctcaagtgaagcatggttggggtgggatgccagggcgcccttccatggctgatattgtcaagatgggcaaaccccaagctaaacctgtgagatctgttgcatgtaataccgggatgccaaccattggtggttcagtcatttccaatgcaacaaatcatacttcaaaagattcacaagacctagttttgccttcacaagtgaactctgttgcaactgatagaataccaaatggtaccaatgaggtctcccctgcatctaatgactcctctattgatgtattacctcccagagaggggttggaggtgccagaatctgtcgccacagttaaacctggatcgtcaactgcagatgtttacaaagatgaagttgaagaagacatggattctgataaaaataaggatatgagtgcaagcaatgcagacgatcgaacatcttcaggaccatatcctgcatctagcaaagaagtacactcagaacatactcaaattgccacccatcacaatgacttgatagtggaaacagaggactctcagtctgatggcaatgcatttgagaataaccgtgttgcagattcagagggaaatatgtctgctactgacaaacagtttgaacagttgattctacatgaggaaaaaaaatcaaaatcatctgaagataacccggctgtaataattcctgatcatcttcaggtttcaaatgctgattgtgcacacttgacatttggtagttttgtgtctggaacacttgatgcgccagtctccttgaaaactgccaatggtgatgaggaggttgcagcagtttctgataaccattcgattgatcagtcagatgtcagaatccatgagtacgaaaataaggatacagtagcacctgcagctgacgaacatgttgcctcttcaacaaaaagtgacacggagaatgttgatgttgcacctgtacaacagcctgaattgagaacagccgatttaatagatgttccaaacaacaccatgtacaataatttatcaacctccgattatgcaactccaagtgcagtgcaaccagattcttccgcacacatttatctgcaagaacatcgacaattgcaaaacatttcccctctctctagctttatgcaaggaaatatcccgaatggactattgccaccagcacttccacctttgcgtgactttgatcctgctttctcattattacttactaacccaccattggctacgatggttcatggcacaacatcatcgtccatgggcaatgcaactactgtttctacacaaccacaagagattgtgaatccaggtgcttcatccaaccctcaattgaatcaatctcagccaagcaccagcaccagcattgcttctggtcctccactccctcagcatctcacgcttcacccttatgctcaagcaactcttcctcttgggtatgcaagcatgattggctacccatctctagccccaagttatacatatctcccgcctcctgcctttcagcaaccatacatgaacagtggcctattccaccaagcagcagctgcagttcccaattccagtgtaaaatatcctttgccacagtacaaaggcaatgtttcccttgcgagcttaccccagcaagcctcactgctctcaagctatgttgggggctttggagctgcaagcagcatgccaggaaattttgccctgaaccaaagcacaccatcagcaaccgctgctcctgggtttgatggaacagtgcccgcgcaatacaaagaagggaatcaatttgtatctcttcagcagagcgagaacgctgcgatgtggatgcatggtgccagttcgcgaacaatgccacctcttgcagcaaatgccttgtattatcaagggcagcagggtcaccagggcggccttcggcaggggcagctgccttcacagtttggtgctccacttgcaccgacacagcccggcctgggccatgagcaccggaaccctagtgacggcaacttaagctctgctgccgctgccgctcaggctaaccaaatgtggccaaatagttactga</cdnaseq>

Protein Sequence

<aaseq>MRGGGGRGGGGGGGGRVPFYAAAAAAEPASRKLVQGLKGILTDR SEAEIYATLLDCGMDPDVAVERLISQDPFHEVRRKRDKKKEIKAPQETRPRPFYKPAF RGSKTGGDSTGSGKGPTKKETELHSLPKSSVSDSVKESNPTEKISAADHATINDSLIL SSGQADAKSTPLQPPSQVKHGWGGMPGRPSMADIVKMGKPQAKPVRSVACNTGMPTIG GSVISNATNHTSKDSQDLVLPSQVNSVATDRIPNGTNEVSPASNDSSIDVLPPREGLE VPESVATVKPGSSTADVYKDEVEEDMDSDKNKDMSASNADDRTSSGPYPASSKEVHSE HTQIATHHNDLIVETEDSQSDGNAFENNRVADSEGNMSATDKQFEQLILHEEKKSKSS EDNPAVIIPDHLQVSNADCAHLTFGSFVSGTLDAPVSLKTANGDEEVAAVSDNHSIDQ SDVRIHEYENKDTVAPAADEHVASSTKSDTENVDVAPVQQPELRTADLIDVPNNTMYN NLSTSDYATPSAVQPDSSAHIYLQEHRQLQNISPLSSFMQGNIPNGLLPPALPPLRDF DPAFSLLLTNPPLATMVHGTTSSSMGNATTVSTQPQEIVNPGASSNPQLNQSQPSTST SIASGPPLPQHLTLHPYAQATLPLGYASMIGYPSLAPSYTYLPPPAFQQPYMNSGLFH QAAAAVPNSSVKYPLPQYKGNVSLASLPQQASLLSSYVGGFGAASSMPGNFALNQSTP SATAAPGFDGTVPAQYKEGNQFVSLQQSENAAMWMHGASSRTMPPLAANALYYQGQQG HQGGLRQGQLPSQFGAPLAPTQPGLGHEHRNPSDGNLSSAAAAAQANQMWPNSY</aaseq>

Gene Sequence

<dnaseqindica>166..245#276..406#1598..1641#2707..2776#2879..3002#3606..4246#5280..5550#5620..5899#6228..6395#7053..7544#7618..7875#ggtgggtgtgggcagtacaccaaacgggaacaggaggcggcgacgagggttttgctgctcctcccctccgcaaaccgtgtgcgcggcggcgacgccacagggggagctcgccgccttcggatcgagagggaggaggggcggcggagcgggtggtggggaggcgacatgagaggcgggggcggccggggcgggggcgggggcggcggtgggagggtgcccttctacgccgcggcggcggcggcggagcctcgggcgggggatgcggccgcgatcccgccggcgtcgaggaagctggtgcaggggcttaaggggatcctgaccgaccgctccgaggccgagatctacgccacgctcctggattgcggcatggaccccgacgtcgccgtcgagcgcctcatctcgcaaggtattatagcccccggtttctggcgcccgtcgtcgcctaggctccccccggacgattttgaattgtacaggtttattttgttttgcggcgcggtgtgcttgtgagaggttggagtactagggtttgatttcgcgtgacgattgcctcggacctggaggagttgcgctttgagctaatctgttcctttattgtttttagtatttttgtcatgtttcggtgctcttgtaactccaaacttggacctttgctattgaactgcctgtcaatctggtgttctttttttaacgctgtacttatctgtattcacttgctgtgagtttgattacatggagctgcctatgtgggaagctagtaattcatattgtttttacaatcaatgaagcttatatattttcctgtgcagaagaattttttttcttggcttgagatggaattggctacctatgatgtagtaagcagattcagtttaatatcttagtacgatgggcttggtttgtgtgcttattcaggaacatgatggtttatctatatattaatatctgctgattgttttccatgtttgagttgtgtggttggtgtgtatagattgtgtgttggatggaattgcaacatgttattcaacttaagctatacaatgatttggttttggaagctttcttcatgcattttatttacctttctgtagagatctatttgcattcattattatttagtgttactttctatctgtttaatgcttggtctaggtacattgctttttaggaagctggtaactttgaattgtatctggaattgcatccagtggcatttatctatttgtgttgggatatttttttttctgttggaactagtgcattaaaagacaattgtttacctctgttagaagctagtgtaacgagaataattcctttctttgttgggaagaaagtgctagactgcaagcataaaagtgataccttaggtgttggtcgcttttgttggctgaaggagctaatcaaaacttgtcctttccttttattcctgagtgtcttatttgtcctatactcatgcagtcatgctctatacaatgcttacctgtgctatgtcatctagctgatctatttctaataaatgcagcatagtatggaactatagatcaaaaacataattccatgttggtagttcctctaacttattttcatgtctgttcagatccttttcatgaagtgagaagaaagcgtgacaagaaaaaggaggtaagcatatgaactctgaattctatatgctgccagttcttaaggaaattcactgtttggttttcctccctgtttattttgtgtgagttttccatctcaatgcgaatatagtgtcattgatcacatacgagttagaactatgctacatgctaatttaccgttgttgtttgccgcaatacctgatgagtagtactgaatttatttctcattctcatgatttgtttacaactgtatgccatttttagggactaggtcgttttgtatcaaatgctttgttctcgcgatactgtataagtgtatttgatggcagttaagttctcttcaagggaaatttttatgtcattaaattggacatgctttgcacatgcgccgccaacatttttatactgagacatatgcaactactccatcagtacacttctcacatacgccatcatgtgactgtgtccaagccaaccgttagcacatgaaaaaaattgatttgacccctagatgctgtgttggtgggacatcacataaagggggcaatctgaggtctgagaattctgttatgagttccagattttgaaatcgtaatgttgaaattctgattttgtgtaatcaaaataataatttgagatattacgctaaatttcatttatttgaactccaaattcagacattcaaagttgaaattagcttgatgtttgataatgtagttgaactgaaattgaaatttgttggaagtatgcaattggagtttttgagcatcatagaattcaaattttagtccttttaagttttaagcattctctagccttagagatggccccctttaatcgctgtcccatcaacacatcacccagagtcaaagccaccttttttttttcacttgcctaatagttggcctggatggcatatgccccacaatggtgtatatgagaagtgcaccaaggtagtagtgttatgtgtgagtctttgagagcttgcaaaaattactgaatattattgatctctgaagtttgtccaagtgacatttctatgccattttttgttctcctaacaaactcttattattacatgtagatcaaagcacctcaggaaaccaggcctcggccattttataaacctgcatttcgaggatctaagactggaggtagtgtgcaacattatgcattatgacatgataatgaaatttgtttttttttaaaaaaaaaaatataatgggggcacattctgttacctgttaacattttaggagattcaactggcagtggtaaaggccctaccaagaaagaaacggagttacattctcttcctaaatcatcagtctctgattctgtgaaggaaagcaatccaactgagaagatttcagcagccgagtaagtgagagttcttgatttttgcatagtgttttagccatatatttcttgttttcagttaatgtgcctggtttctatttttgtatatgttatccttcggtattgttgattgatgctcgacattttgttcactcttccttttgctaatggaagcactacagaaattacagtgcatgttttgtctgatgtaacattatattttaattagatctttgttagctgtcttcccagtagtatgatgcatgaccatccaacagtctacaattctatttttgtttatctatgtgtaatagtttggatgatttattcagctcccgtaggtaaacatgagacttaccaactgcagtgtcttaacggtgtctgttttgtaatactttctagaaggtggatttatcggaatatctagtttgtacataatggagtcaggatttctccatatatgttaatgagtttatgacctaaaattatacaactactaatgtcttggcagagtagtttgttgtctgggagacatcatgtgtagtgttccagaaattttcttctctctttatcatgcacttttcatttttgtagacctcctaaccttttatactcatttttcagccatgctactatcaatgacagtcttattttatcaagtggccaagctgatgcaaagtccactcctctccagcccccttctcaagtgaagcatggttggggtgggatgccagggcgcccttccatggctgatattgtcaagatgggcaaaccccaagctaaacctgtgagatctgttgcatgtaataccgggatgccaaccattggtggttcagtcatttccaatgcaacaaatcatacttcaaaagattcacaagacctagttttgccttcacaagtgaactctgttgcaactgatagaataccaaatggtaccaatgaggtctcccctgcatctaatgactcctctattgatgtattacctcccagagaggggttggaggtgccagaatctgtcgccacagttaaacctggatcgtcaactgcagatgtttacaaagatgaagttgaagaagacatggattctgataaaaataaggatatgagtgcaagcaatgcagacgatcgaacatcttcaggaccatatcctgcatctagcaaagaagtacactcagaacatactcaaattgccacccatcacaatgacttgatagtggaaacagaggactctcagtctgatggcaatgcatttgagaataaccgtggtaggtcatctaaaattgcccccaccttttttatgacttcatatgtatgcctacaccaaatgcgaatatatattctagaaatctagaacatagatttcgtgtttcggcatggtatagttttgtctatagtaaccagaatacccatcaagccattgttattacattgaatcggaagcaatctgattttatttttgctggcggcttgatctctgcctatttgtcatttggcttatgtgttggtgttactgtctgacatggatcttaagcaagttcccatatccagcactaagcccgtttctttctactagctactgcaagtctaaatccgatacaatactgtcttaaatttttgcgtttgcttatataactactagtactacttaggactggaaccactgtctccatcaacatcttgactttagcatgagactataaatcaaatcctcatgatgagtaatgagttcaatacaaattatttattttgaatcaaattctccctccgttccagaatataacaagttttagggttggacacgattattaagaaagtaggtagaagtgagtggtggagggttgtaattggatgaatagtggaggtaggtgagaaaagtgaatggtggagggttgtgattggttgggaagagaatgttggtagagaagttgttatattttgggacaaatcctaagggctaaaagttgttatattttgggacggagggagtaccttttaaggttgttgctcatttacccgagaatggaccagtagaaagtttgatatattttatttgttcgtatggctccagctattcactattattacctttttatccaatctctactgaaactacaacttttcatattttacgttcttaccaggacctttttattatatcttagtgcagcaccacggcctgtgaaggttctgcatgtgcctttttatattacatttttacactatatattttctaattggcttttctgttggaagttacgagcctcctttctaattgtttatgataatctatttccttagttgcagattcagagggaaatatgtctgctactgacaaacagtttgaacagttgattctacatgaggaaaaaaaatcaaaatcatctgaagataacccggctgtaataattcctgatcatcttcaggtttcaaatgctgattgtgcacacttgacatttggtagttttgtgtctggaacacttgatgcgccagtctccttgaaaactgccaatggtgatgaggaggttgcagcagtttctgataaccattcgattgatcagtcagatgtcaggtatgtatttgtctgtcgcattcttcacttcttttcaaacatcatgtaacatctatttccatttttcagaatccatgagtacgaaaataaggatacagtagcacctgcagctgacgaacatgttgcctcttcaacaaaaagtgacacggagaatgttgatgttgcacctgtacaacagcctgaattgagaacagccgatttaatagatgttccaaacaacaccatgtacaataatttatcaacctccgattatgcaactccaagtgcagtgcaaccagattcttccgcacacatttatctgcaagaacatcgacaattgcaaaacatttcccctctctctagctttatggtattggcttctttttgttttattaaataattttacattgataccttattagtagtttccatatggaattatctacataaaaaattcggaattgtgtttttattttgtataagccccatttaatttagtttctgcaagcatatctgtcagtgcatcccccagtgcatgttctctaaaataatggaattaactccatctagatagagatacattacttcactgatgaagaaatctgtgggcgcatttctgtttcactgttgatgatatattataaccattaacacctatcttttcttcactgagaagcttattttacttatctttgcagcaaggaaatatcccgaatggactattgccaccagcacttccacctttgcgtgactttgatcctgctttctcattattacttactaacccaccattggctacgatggttcatggcacaacatcatcgtccatgggcaatgcaactactgtttctacacaaccacaagaggtgtggaacagctcattgaataattggactttttatctacttcatacttccatgctatcttttgggtcatagaatcaattcataaactagctttactctttgaatagacatagtagcatacatatttgttctgataaacggcatttatggttattgatgaacttaaacctgtggtttgatgagtttaatcaagtacacgggtatttctcctcgttgcatggttttgctgatgatttcgcttgatggcttcatgatgcaactaacctgtatagcttcatgctatgcaactgtttcttttgttaactttgtcgtgaaggcactattaataagccagagaccaggcagtaactaatcgaaatttggttaagtttggtcacatcatttggcgaagttccatttgcatagcatttgttttgttatgttttttttttaagcctgctttgctgtcaaaactgtacatacttactacaaaagtcacgcttcaacctttggctcatcattttctcgcaatagtaaacgcatacctcatcaagctgtacttttttatcctcattttattgaggtttatcttgtgatttgtgaatatattttctgccttaattttcttttggattgtttacctgtgtatcattgttcttgtggtgtcggctcttgcagattgtgaatccaggtgcttcatccaaccctcaattgaatcaatctcagccaagcaccagcaccagcattgcttctggtcctccactccctcagcatctcacgcttcacccttatgctcaagcaactcttcctcttgggtatgcaagcatgattggctacccatctctagccccaagttatacatatctcccgcctcctgcctttcagcaaccatacatgaacagtggcctattccaccaagcagcagctgcagttcccaattccagtgtaaaatatcctttgccacagtacaaaggcaatgtttcccttgcgagcttaccccagcaagcctcactgctctcaagctatgttgggggctttggagctgcaagcagcatgccaggaaattttgccctgaaccaaagcacaccatcagcaaccgctgctcctgggtttgatggaacagtgcccgcgcaatacaaagaagggaatcaatttgtatctcttcagcaggtaactaccatggcacttaaatttgtacaagcatgaattcaatagcaatctaacttccgtaaatttcttgcagagcgagaacgctgcgatgtggatgcatggtgccagttcgcgaacaatgccacctcttgcagcaaatgccttgtattatcaagggcagcagggtcaccagggcggccttcggcaggggcagctgccttcacagtttggtgctccacttgcaccgacacagcccggcctgggccatgagcaccggaaccctagtgacggcaacttaagctctgctgccgctgccgctcaggctaaccaaatgtggccaaatagttactgacccagcctttgaaacccttttgagtgtgtggtcctgttgtggtgcgtgctacgtcagagatgccatgcaatgcttttggcctgattcaggcgcctgaatagcaactgtgtatatgagttgctatgtcgacattttggagaggcagaggagatgtatgtttgatcatcatgttctactacccttagcattttctaggatggcctaaaactgtagctctatttatttatattctgatagaaaggaccgttctttctcagtttgttttgttcttccgtttacatatcatgtaaacaataaaactgagatatctaacaaagcagcaccatgaatgaatttcaagg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0581800, RefSeq:Os05g0581800