Os05g0581900

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Revision as of 10:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0581900| Description = X8 domain containing protein| Version = NM_001062969.1 GI:115465668 GeneID:4339730| Length = 1902 bp| Definition = ...")
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Gene Name

Os05g0581900

Description

X8 domain containing protein

Version

NM_001062969.1 GI:115465668 GeneID:4339730

Length

1902 bp

Definition

Oryza sativa Japonica Group Os05g0581900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29032433..29034334

Sequence Coding Region

29032710..29032938,29033054..29033114,29033330..29033824,29034164..29034224

Expression

GEO Profiles:Os05g0581900

Genome Context

<gbrowseImage1> name=NC_008398:29032433..29034334 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:29032433..29034334 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatctttggcgagttcattgcttgggttggctccttgttctactcctcttcagccatgaagctgcagggggaggaggagcagagcaggtagcaacacaagcgcatcacgacgcgtcgcggcggctctccgcgcaggtggcgcacggcacgccggagcgggacgtgacctcgccgctcgccactgtcccggtggataacccggcggcgaaccccaccgtgacgtcgacgacgaacccggcggcaatgccggggacgcagacgacgccgtcgctggcgaacccggtggccgcgggcggcggcggcggcggcggaggcgggagctggtgcgtggcgagcccgagcgcgagcacggcggcgctgcaggtggcgctggactacgcgtgcgggcagggcggcgtggactgctccgccatccagtccggcggcggctgcttcaaccccaacaccgttcgcgaccacgcgtcgttcgccttcaacagctactaccagaagaaccccgtccagaccagctgcgacttcgccggcaccgccatcctcaccagcaccgatcccaatccattcacctctcgttgcaattctgcaggctcctcatcgtgcaagtacccatcgacgagcaccggtgcttcggttctgaacacgtcgacgccgacgaacccagctttcggtggctacgacaactctcctcctggattcggcaacaactcccctccgctgtacgggtccatgtcgcctccgggttacaacgacaacatcggcgccgccgcggccatggccggcagcaaggaaacactcctgtcgctggcgtgcgtcgtcgcaacggtttctctgaacctgtacaagtga</cdnaseq>

Protein Sequence

<aaseq>MDLWRVHCLGWLLVLLLFSHEAAGGGGAEQVATQAHHDASRRLS AQVAHGTPERDVTSPLATVPVDNPAANPTVTSTTNPAAMPGTQTTPSLANPVAAGGGG GGGGGSWCVASPSASTAALQVALDYACGQGGVDCSAIQSGGGCFNPNTVRDHASFAFN SYYQKNPVQTSCDFAGTAILTSTDPNPFTSRCNSAGSSSCKYPSTSTGASVLNTSTPT NPAFGGYDNSPPGFGNNSPPLYGSMSPPGYNDNIGAAAAMAGSKETLLSLACVVATVS LNLYK</aaseq>

Gene Sequence

<dnaseqindica>1397..1625#1221..1281#511..1005#111..171#aacgctttcctgaatcagcacactcctacttgcagctagagctgagcaagccaaagctttttatcactcttggtggtgttcttagtagagcttttcgcaaagattgtgccatggatctttggcgagttcattgcttgggttggctccttgttctactcctcttcagccatggtgagtttagttactgaccaagtttgcgtctttgtgtagctttctgtcttgttgttttaggatttgaggtgatggtgttactactgctgattctgcttggaagaaattttttgctaggttagaatgaataaattgtttgtttgtttaattccgtttagttaaatcagttactagttgaagctgacgaacagagtgtcatgtcacagcaacagacaaacacatgcttttatcacagattagtaaacacaagtgtcaagtgtgcttttgcttaatttaacaaaaataaatatggaaatatgaagtgaaaactactcacaatgagctatgctttggttgaagaagctgcagggggaggaggagcagagcaggtagcaacacaagcgcatcacgacgcgtcgcggcggctctccgcgcaggtggcgcacggcacgccggagcgggacgtgacctcgccgctcgccactgtcccggtggataacccggcggcgaaccccaccgtgacgtcgacgacgaacccggcggcaatgccggggacgcagacgacgccgtcgctggcgaacccggtggccgcgggcggcggcggcggcggcggaggcgggagctggtgcgtggcgagcccgagcgcgagcacggcggcgctgcaggtggcgctggactacgcgtgcgggcagggcggcgtggactgctccgccatccagtccggcggcggctgcttcaaccccaacaccgttcgcgaccacgcgtcgttcgccttcaacagctactaccagaagaaccccgtccagaccagctgcgacttcgccggcaccgccatcctcaccagcaccgatcccagtaagcaaccaaatttcccttctctagcagagcaagagcatgatcagtgacaactcgtacaagttgaatttgaacatgcatgttggtggagtgatatattatatattgatctatcttgtcgatttttttaaaaaaatttcgtagccatttagttgatatgcaataaacggatggatgcctactcgagctattagaatccatctcctgactgacagatccattcacctctcgttgcaattctgcaggctcctcatcgtgcaagtacccatcgacgaggtaaaatcctagcaactcaaagtctgaaacaaataaacaagaaagaagcagcatgtgaatttcgctgaaaattctttttgcttctcttgttttctttgtgcgatcgaatcggcagcaccggtgcttcggttctgaacacgtcgacgccgacgaacccagctttcggtggctacgacaactctcctcctggattcggcaacaactcccctccgctgtacgggtccatgtcgcctccgggttacaacgacaacatcggcgccgccgcggccatggccggcagcaaggaaacactcctgtcgctggcgtgcgtcgtcgcaacggtttctctgaacctgtacaagtgagaatccaagctgctgtttcacgattcaaatctgtagaaactgcacggctttggtggatgttttggtactcgcacagttgccctgatgcaagcagaaagcagagaaatgaatgtgcagaatatgttttggtcagatgagctaggagaagcaggccggcaagattgatagatagatcgacttctcctagctgtagaaatagtagcatgtggtgctgtatgtagttactagtagtaatcagtaagaacattgagctgaacttttgcgttcacctacatat</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0581900, RefSeq:Os05g0581900