Os05g0583000

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Revision as of 10:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0583000| Description = Similar to WRKY transcription factor 34| Version = NM_001062978.2 GI:297604981 GeneID:4339739| Length = 3965 bp| De...")
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Gene Name

Os05g0583000

Description

Similar to WRKY transcription factor 34

Version

NM_001062978.2 GI:297604981 GeneID:4339739

Length

3965 bp

Definition

Oryza sativa Japonica Group Os05g0583000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29127734..29131698

Sequence Coding Region

29128839..29128943,29129204..29129456,29129952..29130019

Expression

GEO Profiles:Os05g0583000

Genome Context

<gbrowseImage1> name=NC_008398:29127734..29131698 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:29127734..29131698 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gccacgtgtggcgttcatgaccaagagcgaggtcgaccacctcgaggacggctaccggtggcgcaagtacggccagaaagccgtcaagaacagctcctacccaagctactaccggtgcacggcgccgcggtgcggggtgaagaagcgggtggagaggtcggagcaggacccgtccatggtgatcaccacatacgaagggcagcacacgcacccgagccccgtgagctaccacatgcacaggcagcaggggctcatgcatgtgagcgcgcgcggtgtcatgcccggcgccgccggcgcctaccagttcggcgcgccgccgccgccgctccttggcttcgacgaagccctcgccgctcggtcccaggacacagtgctggtatcacaggaagacagattatcacagcaacagaggtctctttattatag</cdnaseq>

Protein Sequence

<aaseq>ATCGVHDQERGRPPRGRLPVAQVRPESRQEQLLPKLLPVHGAAV RGEEAGGEVGAGPVHGDHHIRRAAHAPEPRELPHAQAAGAHACERARCHARRRRRLPV RRAAAAAPWLRRSPRRSVPGHSAGITGRQIITATEVSLL</aaseq>

Gene Sequence

<dnaseqindica>1106..1210#1471..1723#2219..2286#cgcctttgcaaaactcctctcatttcatttcctcccaagagtcaagctagcccttcttgcttgctccgttcaacgcctcttccccagcttcacagtactccatgtctggacctggaggaggaggtcatggcctctacgaggatcatcctgcagccgccggcttcctccccttcgaccacgacgacgacgtggtggccagcttcttctttggcagatcggcggcgtccggaggaggagccggcgccggcgccggcgctggagacgatgatggtgttgggctcatcacgccctactccagcatcacggattatctgcaaggcttcctgcaggaccccgtgtacgcgtcgtccccgttgggcggcgatgctgccgtgaagcacgaaacggtggtggatcatcccagtcaggccggcggcgtggcggcggcgccggccacgccgaactcgtcggtgctgtcgtcgtccagcgaggcggctggaggggacgatctgcgccggtgcaagaaaggtcgtcggccggaggacgaggaggaggaggagattgacgatgagggatcggccgttcagagttgcaagtaagttcagtattaatttgatcttgttttgtagctagatccatgctgaatttatgtctgatcgatttatcacacgtgcatggctagatagatcttggatgaattaattaatttggcttcggtgtgtacatgcatctacctacctagtttttaattcatcgatcggtacaaattaattaactttacgggtctgaatacgaagattccgtgtgtgtatataccgcgtgtgaagtgttaacgtcggaatttagggtttgttccctcccttcttttcacaataatttgttgaaaccgatcttttcacaataattaacaatatatatatatatgaattaatgattaactgacgagactagcgatcgatgattaacaaatgattcacgagacagtagcaatcatgcaccggctgatatatatgcgcaagaggccaatatctcaactgagacagcatatgtcgatctcgatcgatcgatctggtgcgtgcaggacgaacaaaatgaagaataaaaaaggggcgaagaaggagcgtgagccacgtgtggcgttcatgaccaagagcgaggtcgaccacctcgaggacggctaccggtggcgcaagtacggccagaaagccgtcaagaacagctcctacccaaggtcagctagccaaattttcacttgcatatgcattattctccatcataattggcatgcatatatttgacagaagcagctaccacagcattagcaacaagctaagcacacattggcattggtctgagttttttttttctcagaatatctcgatggatccatatgttagaagtatatatctacgatggacagttcttcacctaatacctgcgtcttcttctgtgtcgtcacttgactcttctctattccaacgaatgcaggagctactaccggtgcacggcgccgcggtgcggggtgaagaagcgggtggagaggtcggagcaggacccgtccatggtgatcaccacatacgaagggcagcacacgcacccgagccccgtgagctaccacatgcacaggcagcaggggctcatgcatgtgagcgcgcgcggtgtcatgcccggcgccgccggcgcctaccagttcggcgcgccgccgccgccgctccttggcttcgacgaagccctcgccgctcgggtgcgaatgacgatgaaccagcagcagcagcagcagcagttaggcttcgtgccgagcatacacgccgccgccgcccggccgacgatgcctcctcttcatctctacaccgcgcagcaagacctcttccttccgtgacaggcagtcaccacggctattgatattagatctttcttatttacggtttacagaatgcatgctgctcgagataaatttgtgcgcggctatatatatatggttacgttaccgatgaccaagtgaagtgtgggatgcatgttttgtgtcctcgtttttttggttggtctacaaaacatgtttgtttgagttgcattgctaagtgcctagctagctatataaacactgtctttaattccaaactgtagatcatgaggaatttgggtcttgttattgatttgaattctgatgtgtcacgccccgaactagtaccgaccggaactagtctgtgacgctccaatttaacctgttaatcaataccagtcccaggacacagtgctggtatcacaggaagacagattatcacagcaacagaggtctctttattatagagtagatgtacagtcatgttgggctgcggacagatcccgagctcacaactgcattacaaaagggaaacggaagccgggacttggaccaaacaacacaggcgcgacttgggaactaggccgaaaccctaaaactcatcgtagccggcttgctcctggaagaactcctcatcagcaggatccgcttcgtcttcttcagcgactggggggggattatttatatagagcaagggtgagtacggggagtactcagcaagccaagggaaataagtgtttaatgcaggcttcaaggaaaggccgttgtttttgcaattgattttagttgaactcctttctgaaaacaactaagtgagtgcttctcaaacgacacggttgagacagtgcgtctcgtccggtcggagtatgtgtaatgtatcggtctttagacttgattcaaggttggcatccggccaacagcttttcaaacggccacccgggcctacaactttcaaacggccacccgggcctagctgatcccatcagctgcagatttttcaaacatcgaacccctttccacaatagcaatttcacaagcagtagtcaaacaaaactacgctaggaatcacctcacatccgcccatgaccgtgggcacggctgttcgaacagtttgttaacctctgcagaggggggtacactttacccacacgacattactaacccggatcacccagcccgtggggatcagccacgtcgggagacctccaagctttcatgacaaggcatttccaaagccgatacaggtttaccatatgccgacgagaggggtcccagaccaacaacaggttaggtcccagaccatactgtgccaggaagcccaggggtcctccccgacaccaccccagcgaatccacatgtctctcgacatcaaggctcccctgataagctagttactcagccaggggtgtcccattccacccatgtggtcgtacttgtcttatgtttagatgaaattccaaggaatcggttcttaagtgcgagagcgggaaaaccgtacacccggtacgttccccggtccgcggttttggaaattcatttagttcacaagcaccgacctaggtgtcgggttttccaagtcttttgtaaaactcaagttttacccaagaagttgctcagattttaaatttgaaggcgcccttcggtactcgcacagattgcatgatttccgaggcgcaactgggtggttacaagggcacatggtataacaattaacaaaggaaggatcaaatgcaacaaactaggtagatccgccaatctgccttgcagacgggacaacagattaagtgcgatcctatcaatgcataatattttgcaagcaacataattaaatttcaaatataggctcaagatgttcaaaggtggcttgccttgctcgagatctggagcttgatcctcgaaatcctcgcactgcgggtcttcgggctccggaactacacgcgaaacgggacaactcaacaaacggcgaaaatgaagccctaataatgacctctaagcgtgccattagatagatctcgagatttgaggaattttggaagttgaacggagtcaaacggatctacggttgggaagatattgaatttctaagattattggatttttggtctaaaggaaaaggatttaattaaatcctttttggaaaagaaaa</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0583000, RefSeq:Os05g0583000