Os05g0584000

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Revision as of 10:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0584000| Description = Similar to WRKY transcription factor 12| Version = NM_001187614.1 GI:297724358 GeneID:9267508| Length = 1161 bp| De...")
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Gene Name

Os05g0584000

Description

Similar to WRKY transcription factor 12

Version

NM_001187614.1 GI:297724358 GeneID:9267508

Length

1161 bp

Definition

Oryza sativa Japonica Group Os05g0584000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29075019..29076179

Sequence Coding Region

29075019..29075427,29075540..29075662,29075782..29076179

Expression

GEO Profiles:Os05g0584000

Genome Context

<gbrowseImage1> name=NC_008398:29075019..29076179 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:29075019..29076179 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtactccaacgattgggatctccaggcactggtcaggagctgtggcacggccgtcgccgactcggagccggagccgccggcggcgccgtcgacgacgcggcgggctgaagccgaaaccgtcttcgttggccgtgctggtggggtgccggagttcgttgggcaaccggtgaggtcgtcggcggcatcgttttacgacttggagtacttggacctgtaccacgagcggcctcgggcgccgttcttggtgacggcgccgtcgacgagccgcgagcgtggggagggcggcgagcatgaggtgctcatctccttcccggcgattgcctcgacgtccgggcagggtaggaagcagcctggccggaaaccgggcgttcgtactgccaggcccaaaagaagcaagaagagccagctgaagaaagtggtgtgcgaggtgccggttgccgacggcggcgtctccaccgacctttgggcatggcgcaagtatggccagaaacctatcaagggctcgccgtatcctcggggatactacaagtgcagtagcctcaaggcgtgcatggcgaggaagatggtggagcggtcgccggagaagcccggggtgctggtcatcacctacatcgccgagcactgccacgccgtgcccacgcagctcaactcgctggccggcaccacgcgcaacaacaagccggcgtcccctgaccagcagcagcagcagcagccgtctcccggcggcgcgtcgacggacgaggcggcggcggcggcggccaagacggaggacagcgccgacactacgtgctccatggcggacgacgagaacgacctctgggcgccggtggagatggatatgaacgatttctttggccccttcgacgatgatctcgaccactttttggatgacgacgccgttcttggacgccggctgtcgctctag</cdnaseq>

Protein Sequence

<aaseq>MEYSNDWDLQALVRSCGTAVADSEPEPPAAPSTTRRAEAETVFV GRAGGVPEFVGQPVRSSAASFYDLEYLDLYHERPRAPFLVTAPSTSRERGEGGEHEVL ISFPAIASTSGQGRKQPGRKPGVRTARPKRSKKSQLKKVVCEVPVADGGVSTDLWAWR KYGQKPIKGSPYPRGYYKCSSLKACMARKMVERSPEKPGVLVITYIAEHCHAVPTQLN SLAGTTRNNKPASPDQQQQQQPSPGGASTDEAAAAAAKTEDSADTTCSMADDENDLWA PVEMDMNDFFGPFDDDLDHFLDDDAVLGRRLSL</aaseq>

Gene Sequence

<dnaseqindica>753..1161#518..640#1..398#atggagtactccaacgattgggatctccaggcactggtcaggagctgtggcacggccgtcgccgactcggagccggagccgccggcggcgccgtcgacgacgcggcgggctgaagccgaaaccgtcttcgttggccgtgctggtggggtgccggagttcgttgggcaaccggtgaggtcgtcggcggcatcgttttacgacttggagtacttggacctgtaccacgagcggcctcgggcgccgttcttggtgacggcgccgtcgacgagccgcgagcgtggggagggcggcgagcatgaggtgctcatctccttcccggcgattgcctcgacgtccgggcagggtaggaagcagcctggccggaaaccgggcgttcgtactgccaggcccaaaagaaggtacaaatatatatacacagcccatgctgcactgagaaaaatgaatatatttcattgtttatttgatgagattattagcactaacagctgtggttaatttacatgctcgatcgatgcagcaagaagagccagctgaagaaagtggtgtgcgaggtgccggttgccgacggcggcgtctccaccgacctttgggcatggcgcaagtatggccagaaacctatcaagggctcgccgtatcctcggtaattaactagctagtcgcattaccagcagtgccactgccaattgccattagcgtttgagttcagttgattgattgcatcgtgtatatgcatgcgtgttcctcttgaacaggggatactacaagtgcagtagcctcaaggcgtgcatggcgaggaagatggtggagcggtcgccggagaagcccggggtgctggtcatcacctacatcgccgagcactgccacgccgtgcccacgcagctcaactcgctggccggcaccacgcgcaacaacaagccggcgtcccctgaccagcagcagcagcagcagccgtctcccggcggcgcgtcgacggacgaggcggcggcggcggcggccaagacggaggacagcgccgacactacgtgctccatggcggacgacgagaacgacctctgggcgccggtggagatggatatgaacgatttctttggccccttcgacgatgatctcgaccactttttggatgacgacgccgttcttggacgccggctgtcgctctag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0584000, RefSeq:Os05g0584000