Os05g0584200

From RiceWiki
Revision as of 10:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0584200| Description = Similar to Late embryogenesis abundant protein Lea14-A| Version = NM_001062984.1 GI:115465698 GeneID:4339745| Length...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0584200

Description

Similar to Late embryogenesis abundant protein Lea14-A

Version

NM_001062984.1 GI:115465698 GeneID:4339745

Length

1237 bp

Definition

Oryza sativa Japonica Group Os05g0584200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29070275..29071511

Sequence Coding Region

29070755..29070960,29071073..29071322

Expression

GEO Profiles:Os05g0584200

Genome Context

<gbrowseImage1> name=NC_008398:29070275..29071511 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:29070275..29071511 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgagcttgatggacaaggcgaaagggttcgtggcggagaagatcgcgcacatcccaaagccggaggcgtcgctggacagcttgtcgttcaaggggatgagccgcgagtgcatcaccgtgcacagcaacgtcaacgtctccaacccctacgaccaccgcctccccatctgcgagctcacctacaccctcaagtgcgccggcaacgttgtggcgtccggcacgatgcccgatccggggtggatcgcggcgagcgacacgacgaagctggagataccggccaagatcccctacgacttcctcatctcgctggtgaaggacgtgggccgggactgggacatcgactaccagctcgacgtcggcctcaccatcgacctccccatcgtcggcaacttcaccatcccgctctccaccagcggcgagatgaagctccccacactcaaggacatgttctaa</cdnaseq>

Protein Sequence

<aaseq>MSSLMDKAKGFVAEKIAHIPKPEASLDSLSFKGMSRECITVHSN VNVSNPYDHRLPICELTYTLKCAGNVVASGTMPDPGWIAASDTTKLEIPAKIPYDFLI SLVKDVGRDWDIDYQLDVGLTIDLPIVGNFTIPLSTSGEMKLPTLKDMF</aaseq>

Gene Sequence

<dnaseqindica>481..686#799..1048#agtgcagagatgggatcgccgatcagtgagcgattcggtgcaggcaactgataaggagggaggatctctccgccgactcagcaccgtccgtttcgggacgtggtgccgttttggccccgcgccgaagcttctcccctttgcagttatcaaattccccttgcagccacgcagatttacgccgcgcccccacgcaacccaaaagttcagcgtaaacttgcctatcaacaaaactacagctcaggcggccacgcgaaatcgcgaggtttcacgtaccaaaagcgcaaaaatccactcggattccacgcggccgagccactgcacgtgggcgcccacgacgcgcccccgtatcgatcggcaccgcgctttcctcctcctgatcttacccgctactatatcatcatctgcttgctttccccccgagagtccacggcctcctgctcctctcgatccaagataatttcactccagcgtgcgtcggccatgtcgagcttgatggacaaggcgaaagggttcgtggcggagaagatcgcgcacatcccaaagccggaggcgtcgctggacagcttgtcgttcaaggggatgagccgcgagtgcatcaccgtgcacagcaacgtcaacgtctccaacccctacgaccaccgcctccccatctgcgagctcacctacaccctcaagtgcgccggcaagtacgtgtcacagctagcttttgcttgtccgatcgatgatccatccatctcacgctcgatcgaattgtgctaattgtgtattggtcgatttggattgattggtcatcatcagcgttgtggcgtccggcacgatgcccgatccggggtggatcgcggcgagcgacacgacgaagctggagataccggccaagatcccctacgacttcctcatctcgctggtgaaggacgtgggccgggactgggacatcgactaccagctcgacgtcggcctcaccatcgacctccccatcgtcggcaacttcaccatcccgctctccaccagcggcgagatgaagctccccacactcaaggacatgttctaattatcttatctctaatctcatcaaccaactccgatcgatcgaactctctgtatgtgtgatgtgtctcgcgaataatggcagctgctctgcacctgtgttcttcttgccctgcatagtatagcatggctgtatgagcggctgaaaaattacctctattcctaatggttgcaataataagctagagaactg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0584200, RefSeq:Os05g0584200