Os05g0584400

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Revision as of 10:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0584400| Description = Conserved hypothetical protein| Version = NM_001062986.1 GI:115465702 GeneID:4339747| Length = 1484 bp| Definition ...")
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Gene Name

Os05g0584400

Description

Conserved hypothetical protein

Version

NM_001062986.1 GI:115465702 GeneID:4339747

Length

1484 bp

Definition

Oryza sativa Japonica Group Os05g0584400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29062305..29063788

Sequence Coding Region

29062340..29062803,29063093..29063105,29063215..29063445

Expression

GEO Profiles:Os05g0584400

Genome Context

<gbrowseImage1> name=NC_008398:29062305..29063788 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:29062305..29063788 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcacatcttccgcctcctggcggcgcggcgccgcgccgtgtcgaccatcacggctgctgctgccgctgcgccggcggcgtcgtccgacgccggccgggacagcgaggacgagggcccattcttcgacctcgacttctcctccgtccggggggcctccagctccggcagcatgtccggctccgacgactccgacgacgactgcacggacctcgacttcatcatctccctccaccgcagccgctccgcctcgccctcctacgacacgctcttctttgccgccgccgcgtcggagcccagcaccaaggccagcttccagccgtcgcatcacttctgcgctaaacgccgcggcggcggcggcctccggacgctgagcttcggcgccaagaaggccgcgttctacggcggccgccacagcttcgcccggagctcatgcagcgcgcggtctctacgtctgttcatggatctctgcaccgagcgtccgtgtcagagtgcgactcgtcgctgtcacggtcaagaagtgacccaggaaaacgcgaagctgatcagagttgccattagcttactactaatcctgatggttaccaagactaacgaacgacccatcacaagtctcaatgaaattgtggtcaacggccgaagcttccacctaaatttcagaaaagacggagaagaattcaaagcactagtacaaattattgaagtttga</cdnaseq>

Protein Sequence

<aaseq>MHIFRLLAARRRAVSTITAAAAAAPAASSDAGRDSEDEGPFFDL DFSSVRGASSSGSMSGSDDSDDDCTDLDFIISLHRSRSASPSYDTLFFAAAASEPSTK ASFQPSHHFCAKRRGGGGLRTLSFGAKKAAFYGGRHSFARSSCSARSLRLFMDLCTER PCQSATRRCHGQEVTQENAKLIRVAISLLLILMVTKTNERPITSLNEIVVNGRSFHLN FRKDGEEFKALVQIIEV</aaseq>

Gene Sequence

<dnaseqindica>36..499#789..801#911..1141#ccccccgaccgcgcgcctcttgccattgctacaccatgcacatcttccgcctcctggcggcgcggcgccgcgccgtgtcgaccatcacggctgctgctgccgctgcgccggcggcgtcgtccgacgccggccgggacagcgaggacgagggcccattcttcgacctcgacttctcctccgtccggggggcctccagctccggcagcatgtccggctccgacgactccgacgacgactgcacggacctcgacttcatcatctccctccaccgcagccgctccgcctcgccctcctacgacacgctcttctttgccgccgccgcgtcggagcccagcaccaaggccagcttccagccgtcgcatcacttctgcgctaaacgccgcggcggcggcggcctccggacgctgagcttcggcgccaagaaggccgcgttctacggcggccgccacagcttcgcccggagctcatgcagcgcgcggtctctacgtctgttcatggagtcaccggcggacgacgacggcgaggaggtcgccgagccgaggagagcgccgccgtcgagggacgtcatccggcggtacctgaccaagatctccagacggttcaggaggacggctccccgcgccgccggcgaggcgagggggctccgccgtctacggaagagccggtcagcgtcggcggcgacgagcctgtcggcgtccagctcggcggcggcggcgccgtccgggcgagacgactcccttctcgagaagcaggacggcattgccagcgccatcgcccactgcaaggagtctctgcaccgaggtgcgtacgtgtcatcattcattcaaacagttcgttaaaccaaacactgtttctaaattatgcccgatttgtatgcgctaatttggcaaaaatttcttccatttttcagcgtccgtgtcagagtgcgactcgtcgctgtcacggtcaagaagtgacccaggaaaacgcgaagctgatcagagttgccattagcttactactaatcctgatggttaccaagactaacgaacgacccatcacaagtctcaatgaaattgtggtcaacggccgaagcttccacctaaatttcagaaaagacggagaagaattcaaagcactagtacaaattattgaagtttgatgaaaatgcggcgcttgaggttgctaaagatttctcatctcttttgttttatgggtgtgggtgagtgtgtgtgtttcacgtccttaattttagtttaaggctttaacccttggtgaatgtttattttttttcctttttctttgttaggagagtgggaaaagtgctctttttaggcttctttatccctcatctagtgtagaagcgtggattgttttgtgtgctcgcgctctttccgtggttttttttctctctcgtctttctagtttgcttttgtacaagtgactcgcaacacgacatgtaattacgtacattcttgccatttgactggctagttctggctttc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0584400, RefSeq:Os05g0584400