Os05g0585800

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Revision as of 10:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0585800| Description = Protein of unknown function DUF1221 domain containing protein| Version = NM_001062993.1 GI:115465716 GeneID:4339754| ...")
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Gene Name

Os05g0585800

Description

Protein of unknown function DUF1221 domain containing protein

Version

NM_001062993.1 GI:115465716 GeneID:4339754

Length

2264 bp

Definition

Oryza sativa Japonica Group Os05g0585800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29236205..29238468

Sequence Coding Region

29236264..29238363

Expression

GEO Profiles:Os05g0585800

Genome Context

<gbrowseImage1> name=NC_008398:29236205..29238468 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:29236205..29238468 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcagctccggcaggtcggcgaggccatcggcggcgtcaacgccctcatggccttccacgacgacctccgctgcatcaaccctcgccaatgcgccctcctcgcccacgcctacgccctcgccttccgcgccgtcgccggcgagctccgcgcccgcctccgcttccacgaccgcctcaccaaatggaagcccctcgacgatcccctccgcgagctccaccgcgtcgtccgcgacggcgaggcctacatccgccactgcctcctcctcgacccggcccactggtgggcgcgcgccgccgccgccacgcacggcacggaatgcgtcgagcaccacctccacaacctcctttggtgcgtctccgtcgtcgtcgaggcggtcgagaacgtcggcgaggtcaccggctccgaccccgacgagctcgcccggcggcggctggcgctggccagggactacgacaaggacctgctcgatccaaagctcttccgggagaggctcggcgagacgttcctcgccacgcgtgagctcgccgcccggatggacatggcgtggaaggaggacaggtggctgctgtcccagcttctcgacgagaggaagggcccgacatcgtcgccggagccgccattgacgcggcaggagcaccggctcgccgacctcctcgccgcgccgcgcgggaagctgcacccggcgagcgtgctcctgatgagcgacttccacatgcggaggcgcctcggggggaacgggaacctcaaggaggtgcagtggttgggggaggcgttcgctgtgaagcacgtcgtcggcgtcgacgccgaggcggcggccgcggaggtggcggcgctggcgtcggtgtcgccgcacccgaacgtggcgcactgccgctactgcttccacgacgaggagaagagggagctgtacatggtgatggaccagctgatgagcaaggacctcggcagctacgtcaaggaggtgaactccgccaagcgccgggcgccgctcccgctcgtcgtcgtcgtcgacaccatgctgcagatcgcgtgcggcatggcgcacctgcactccaacaagatgtaccacggcaacctcaacccatccaacgtgatcgtcaagccgcgccatggcgacgcctacctgcatgtcaaggtcgccggcttcgtctccggctccggcacggcgaacgcggccaacccatgcatctggtgcgcgccggaggtggtggggaacgaggcggcggcgacggagaagggcgacgtgtacagcttcgggatgatctgcttcgagctgatcaccgggaagatcccgttcgaggacaaccacctgcagggggagaacatgagcaagaacatccgcgccggcgagcggccgctgttcccgttccagtcgcccaagtacctgaccagcctgacgcggcggtgctggcacggcgaggcggcgcagcggccgccgttccactccatctgccgcgtgctccgctacgtgaagcgcttcctggtgatgaataacccggagcaggcggcggcggacgcggctggagccgggccggcggtggactacctggacatggaggcgcagctgctgaggaggttcccggagtgggaggggaacggtgtcgccgacgtgccgttcgagatgtacgcgtacagggtgatggagagggacaagatgagcaacgcgtgcagggacaggagctccgactccggcagcgacggcaactcgctgtggggagatgacagcgccagcggcgggtccagcacgacggcgacggacgcgtcggcgtcgagccggccgctgcttgaccggagcggcagcacgaggtcgtcgccgccgcgcaaggtggccatcgccgccgccaaggcaggcaagtgtcgcagcggcattgttactcgtctaaagccttcctccaagattacagctagctccatgtccgtgacgtgtgcagggccgccgcagaagtcgaggtcgatgggcacggtgaggccgccgccggtcgtggcccgccgaacgccgaggattaagtccgacggccacctcaatagggcggcaattccgcctacccgacggcgtaaatccggcgggaacgcttcagactcggagttagcttag</cdnaseq>

Protein Sequence

<aaseq>MEQLRQVGEAIGGVNALMAFHDDLRCINPRQCALLAHAYALAFR AVAGELRARLRFHDRLTKWKPLDDPLRELHRVVRDGEAYIRHCLLLDPAHWWARAAAA THGTECVEHHLHNLLWCVSVVVEAVENVGEVTGSDPDELARRRLALARDYDKDLLDPK LFRERLGETFLATRELAARMDMAWKEDRWLLSQLLDERKGPTSSPEPPLTRQEHRLAD LLAAPRGKLHPASVLLMSDFHMRRRLGGNGNLKEVQWLGEAFAVKHVVGVDAEAAAAE VAALASVSPHPNVAHCRYCFHDEEKRELYMVMDQLMSKDLGSYVKEVNSAKRRAPLPL VVVVDTMLQIACGMAHLHSNKMYHGNLNPSNVIVKPRHGDAYLHVKVAGFVSGSGTAN AANPCIWCAPEVVGNEAAATEKGDVYSFGMICFELITGKIPFEDNHLQGENMSKNIRA GERPLFPFQSPKYLTSLTRRCWHGEAAQRPPFHSICRVLRYVKRFLVMNNPEQAAADA AGAGPAVDYLDMEAQLLRRFPEWEGNGVADVPFEMYAYRVMERDKMSNACRDRSSDSG SDGNSLWGDDSASGGSSTTATDASASSRPLLDRSGSTRSSPPRKVAIAAAKAGKCRSG IVTRLKPSSKITASSMSVTCAGPPQKSRSMGTVRPPPVVARRTPRIKSDGHLNRAAIP PTRRRKSGGNASDSELA</aaseq>

Gene Sequence

<dnaseqindica>60..2159#aaattaatatccatatccatagatagatagaagaagaatcgaggaggagaaggaggaggatggagcagctccggcaggtcggcgaggccatcggcggcgtcaacgccctcatggccttccacgacgacctccgctgcatcaaccctcgccaatgcgccctcctcgcccacgcctacgccctcgccttccgcgccgtcgccggcgagctccgcgcccgcctccgcttccacgaccgcctcaccaaatggaagcccctcgacgatcccctccgcgagctccaccgcgtcgtccgcgacggcgaggcctacatccgccactgcctcctcctcgacccggcccactggtgggcgcgcgccgccgccgccacgcacggcacggaatgcgtcgagcaccacctccacaacctcctttggtgcgtctccgtcgtcgtcgaggcggtcgagaacgtcggcgaggtcaccggctccgaccccgacgagctcgcccggcggcggctggcgctggccagggactacgacaaggacctgctcgatccaaagctcttccgggagaggctcggcgagacgttcctcgccacgcgtgagctcgccgcccggatggacatggcgtggaaggaggacaggtggctgctgtcccagcttctcgacgagaggaagggcccgacatcgtcgccggagccgccattgacgcggcaggagcaccggctcgccgacctcctcgccgcgccgcgcgggaagctgcacccggcgagcgtgctcctgatgagcgacttccacatgcggaggcgcctcggggggaacgggaacctcaaggaggtgcagtggttgggggaggcgttcgctgtgaagcacgtcgtcggcgtcgacgccgaggcggcggccgcggaggtggcggcgctggcgtcggtgtcgccgcacccgaacgtggcgcactgccgctactgcttccacgacgaggagaagagggagctgtacatggtgatggaccagctgatgagcaaggacctcggcagctacgtcaaggaggtgaactccgccaagcgccgggcgccgctcccgctcgtcgtcgtcgtcgacaccatgctgcagatcgcgtgcggcatggcgcacctgcactccaacaagatgtaccacggcaacctcaacccatccaacgtgatcgtcaagccgcgccatggcgacgcctacctgcatgtcaaggtcgccggcttcgtctccggctccggcacggcgaacgcggccaacccatgcatctggtgcgcgccggaggtggtggggaacgaggcggcggcgacggagaagggcgacgtgtacagcttcgggatgatctgcttcgagctgatcaccgggaagatcccgttcgaggacaaccacctgcagggggagaacatgagcaagaacatccgcgccggcgagcggccgctgttcccgttccagtcgcccaagtacctgaccagcctgacgcggcggtgctggcacggcgaggcggcgcagcggccgccgttccactccatctgccgcgtgctccgctacgtgaagcgcttcctggtgatgaataacccggagcaggcggcggcggacgcggctggagccgggccggcggtggactacctggacatggaggcgcagctgctgaggaggttcccggagtgggaggggaacggtgtcgccgacgtgccgttcgagatgtacgcgtacagggtgatggagagggacaagatgagcaacgcgtgcagggacaggagctccgactccggcagcgacggcaactcgctgtggggagatgacagcgccagcggcgggtccagcacgacggcgacggacgcgtcggcgtcgagccggccgctgcttgaccggagcggcagcacgaggtcgtcgccgccgcgcaaggtggccatcgccgccgccaaggcaggcaagtgtcgcagcggcattgttactcgtctaaagccttcctccaagattacagctagctccatgtccgtgacgtgtgcagggccgccgcagaagtcgaggtcgatgggcacggtgaggccgccgccggtcgtggcccgccgaacgccgaggattaagtccgacggccacctcaatagggcggcaattccgcctacccgacggcgtaaatccggcgggaacgcttcagactcggagttagcttagcaaaatgttgggtagccttctttctcatatgatgagaggttttcacttgtttcagaaatacagtatcaaaacgtcaacaatgaaaaaaatttcactcttgtaaat</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0585800, RefSeq:Os05g0585800