Os05g0585900

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Revision as of 10:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0585900| Description = Mitochondrial substrate carrier family protein| Version = NM_001062994.1 GI:115465718 GeneID:4339755| Length = 4686 ...")
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Gene Name

Os05g0585900

Description

Mitochondrial substrate carrier family protein

Version

NM_001062994.1 GI:115465718 GeneID:4339755

Length

4686 bp

Definition

Oryza sativa Japonica Group Os05g0585900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29238523..29243208

Sequence Coding Region

29238932..29239015,29239116..29239454,29239546..29239659,29239748..29239860,29240955..29240992
,29241220..29241383,29241651..29241699,29242891..29243057

Expression

GEO Profiles:Os05g0585900

Genome Context

<gbrowseImage1> name=NC_008398:29238523..29243208 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:29238523..29243208 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcatcggaggacgtggtggggaagagcaggggggacaccgcggtcaccaccatcgtcaacctggcggaggaggccaagctcgcgcgggagggggtcaaggggcctggttaccaggtgctctccatctgcaagtctctcttcgccggtggcgtcgccggtggagtatcacgtactgctgttgctccgctcgaacgaatgaagattctgcttcaggtccaaaaccctcacagtatcaagtacaacggtacaattcaaggtcttaagtacatatggagaacagagggtctccgtggactttttaagggcaatggtaccaattgtgccagaattgttccaaattctgccgtgaagttttttagctatgagcaagcatcaagtggaattttatggctttatcggcaacaaacagggaatgaggatgctcagcttagtccactattgcgccttggagctggtgcttgtgctggtatcatagccatgtctgctacttacccgatggatatggttaggggtaggattaccgtgcagacggaaaagtctccttatcagtaccgtggtatgtttcatgcattgggttcagtataccgtgaagaaggcttccgtgctctatacagagggtggcttccatctgttatcggagtggttccgtatgttggcctcaactttgctgtgtacgagtctctgaaggactggctgcttcagacaaatccatatgatcttggcaaggacaatgagttgcatgtagttacaaggcttggatgtggagctgtggctggaaccataggccagactgttgcttaccctcttgatgtcatcaggaggagaatgcagatggttggttggaataatgcagcatctattgttactggagaaggcaaagaggcgctccagtacaatggtatgatcgatgcattcaggaaaactgttcgctatgaaggtgttggtgctttgtacaagggtcttgtgcccaattcagtgaaggtggtgccttctatcgctattgcattcgtgacatacgagtttgtgcaaaaagttctaggagtagagatgaggatatcagactga</cdnaseq>

Protein Sequence

<aaseq>MASEDVVGKSRGDTAVTTIVNLAEEAKLAREGVKGPGYQVLSIC KSLFAGGVAGGVSRTAVAPLERMKILLQVQNPHSIKYNGTIQGLKYIWRTEGLRGLFK GNGTNCARIVPNSAVKFFSYEQASSGILWLYRQQTGNEDAQLSPLLRLGAGACAGIIA MSATYPMDMVRGRITVQTEKSPYQYRGMFHALGSVYREEGFRALYRGWLPSVIGVVPY VGLNFAVYESLKDWLLQTNPYDLGKDNELHVVTRLGCGAVAGTIGQTVAYPLDVIRRR MQMVGWNNAASIVTGEGKEALQYNGMIDAFRKTVRYEGVGALYKGLVPNSVKVVPSIA IAFVTYEFVQKVLGVEMRISD</aaseq>

Gene Sequence

<dnaseqindica>4194..4277#3755..4093#3550..3663#3349..3461#2217..2254#1826..1989#1510..1558#152..318#acgcacgcacacctctcccctcctctcctcctcccgccgccgccgccgccgccgccgcaaaaacccgaggccgagaggaggagacgggcgcgggggctgatctcgtcggcgaggcgagcgggcgatccggtgcggtgcgggccgggtggacatggcatcggaggacgtggtggggaagagcaggggggacaccgcggtcaccaccatcgtcaacctggcggaggaggccaagctcgcgcgggagggggtcaaggggcctggttaccaggtgctctccatctgcaagtctctcttcgccggtggcgtcgccggtggagtgtgagtttccctcactctttctctctctatctatctatctatcccccctgttcttctccatgcccgcgtctcatcgtctccgtgttgaattctctctgcgcggctcccggattagattcagtggtttcctttagattcgcgtttgatccttgatggatttgtggttctcgtgtcctaccatttttttaattcctcgtcgcgatttgtttcggctatgttgtgtgtgtgcggttataagtttttgcatgaacgtctgttccggagatgtgtgatctatggactcttatgatgaattcgccacgcttaaaccctaacgaggtaaccagatctcgtttcgttgactcgttagttgattcggttcactgggccatgtggacgaatgcatttacggtccaactcgttgtcatggtatagcctggccatctggtggattaaaatttccgtcttgttggttcggtttgcctgtgatctaaccaagttccacttgaattattgtattcaatgcaaaatatattatctggataagtacaccaacaccctagcaatatattgtgtctgacaaggtggtgttggctttttcatcctatggctctattaaattttcagcctttatcttgtctgttattatcttatagttttacgacaaatcatctgggcggctggcctggacatttcaatatctcagtttggtttcactaatagctgtctaattcctctaaataagagtcatttctcactttatgcatcagaccctttacatgtttgtgtcgcactccaattagttttcacctttatggtttaataatttaggtttcatggagtatgttgttctttataatgtcatgcacttgcatctaaagctgaacaataatcaattatatgcataattatgtcatctgatataagatcggtttaagagtattgcaacttgttttattcttgggctaaaaatgttgctatcaggtgttgttatagtcagctgaagtccacgcagaaattatttattttatgtttgagcaaaacacacggatcaactagaatgtttacctggtgcaggttttcttttctcgttatccattctggtgcattttgtcgagcttgaccagcaaatgacaatctacttggaccaatcgtttctaactaactacacaattatgcttataatatttatttactttttttgttgaacagatcacgtactgctgttgctccgctcgaacgaatgaagattctgcttcaggtgatattttcattgctgttgcatttcttatctggtggcatgctattgttgtctactttgcggagcttgcttgaaacataacctctttcactacatatatatagccatttgtattaatagttgaagtacagacactgcacttggtgctaaaccctagtccagttcttgttaatattgtaaatttgtacaagtactttgcgtggaaatgtgtgggcaattgtatgagttggttctaacacctgattcgtgttatctttcctaatgcaggtccaaaaccctcacagtatcaagtacaacggtacaattcaaggtcttaagtacatatggagaacagagggtctccgtggactttttaagggcaatggtaccaattgtgccagaattgttccaaattctgccgtgaagttttttagctatgagcaagcatcaaggtttgttattgtttccaattactgtcatcctacattactgcttgctctcttgccacctacttgctatttgtcctttgcactttgcagaccttttctctgttgcatgatgagtcttctttgacctgatcttggtcagaagcatttcctttttactctactgttaatatggttttgtttcatgaaagcactagtaattgtattcttgccttctttgttattttatgcagtggaattttatggctttatcggcaacaaacagggaatggtatgcttctctccgttattaccatactacacattagttttcctgtgtatgcatcttagttattttgaaagtgtttacacaccatgttgttattgcagacctttggttgttgactacgtaatgagtctcatgactgctctacggttttttccgtttatctataggaaaaatacaattgtagactttttatactcagcttgcccatctcttgttcagtttttagtttcaatatatattatgatcgttttcaagattgtgaggccttgtataataagtcaaaaaccttcattcgtctagatggcccagtacagctaaatcatgtgttatttctgctagaaaccttattagtcctgatatgaagtgatgagcgcaagaaaagctgttgctcaccagcttgaacttggaaacaaagtcttccttgtacagctaattatttgttgtttctgctagcgacctttgtagtcctgctttaggacgataaagcacacaagaaaagttgttggtcatccgcttgaacttgaaaacaaagtctgccttttactttttaaatccctattagaggacaggcttatgtaactgaatcacctaccaaactggaatccattagcaactttgaaagattgaatacctcacctccaaagagtagtacaaagcaagtagtgcaatactctgagcgcacgttatctccagtgtctgttctcgttatctcagtccgtgctcactgtatatgcacactgagtccaaatcattttgtatgctgtagagttgtcagtaatatgacaacgtgtgcaacactgctggacatgctgcgagcctgtgacggatcttagagcttacacaatatccaatgttccttatgtatagtattgttctaaaaatgtaaattaacaatttaaatgctggggagcagagttcctgatgttttttttttgactggaagggttcctgatgttcatgtctttttctgtacaaatagatttcttgaatgttctgcttcaattgaacaagagaatttatattcttgttgatgtattatataaagttgataacagaaaattctggattcagcactgacatgttcctatgctgtacagaggatgctcagcttagtccactattgcgccttggagctggtgcttgtgctggtatcatagccatgtctgctacttacccgatggatatggttaggggtaggattaccgtgcaggtaatgtatcaacaacgtcaacacagcataactcaatctacttctgtttcatattctgtctattgacctctaaatgtcatatatgcagacggaaaagtctccttatcagtaccgtggtatgtttcatgcattgggttcagtataccgtgaagaaggcttccgtgctctatacagagggtggcttccatctgttatcggagtggtaggtctcttctttaattagttaacagctttgcctcgttagtgccttgctgacaagtgctttccacattatctttgtcatcttcttgcaggttccgtatgttggcctcaactttgctgtgtacgagtctctgaaggactggctgcttcagacaaatccatatgatcttggcaaggacaatgagttgcatgtagttacaaggcttggatgtggagctgtggctggaaccataggccagactgttgcttaccctcttgatgtcatcaggaggagaatgcagatggttggttggaataatgcagcatctattgttactggagaaggcaaagaggcgctccagtacaatggtatgatcgatgcattcaggaaaactgttcgctatgaaggtgttggtgctttgtacaagggtcttgtgcccaattcagtgaaggtaatgtttcctacgaaaaattcaaatatttgcaaccttaatggatcatcatcgtagtgcttgtttatgacatgctgacctttgcttgcctcttcatcaggtggtgccttctatcgctattgcattcgtgacatacgagtttgtgcaaaaagttctaggagtagagatgaggatatcagactgaagaaattggagttagtgctggtcattatcaactgctatttttgtagggtggtgagttctgtttttgtaggaagggcaggtagaaggatcatagcactgaggctcccattcagcataaggccctctcagcccatgttggtatatcctactactgtttccagatcctaattgttgctggacccgtgggaaaaattaataagttggctgtaaagcatgaagcatttgcctaactcataaagtctattcagtcgtgatggtgtattgagattgaaaactcatgcagtatgctgtgtgctgctaatagttgattttcatcattttcttctctttgtctaagattgtttctgctgataaatactctacttaaaccgagtaatgttggtgcgttttataccagcatttccttttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0585900, RefSeq:Os05g0585900