Os05g0586400

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Revision as of 10:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0586400| Description = Conserved hypothetical protein| Version = NM_001062996.1 GI:115465722 GeneID:4339757| Length = 6040 bp| Definition ...")
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Gene Name

Os05g0586400

Description

Conserved hypothetical protein

Version

NM_001062996.1 GI:115465722 GeneID:4339757

Length

6040 bp

Definition

Oryza sativa Japonica Group Os05g0586400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29295140..29301179

Sequence Coding Region

29295520..29297522,29298369..29298429,29298508..29298731,29300605..29300659

Expression

GEO Profiles:Os05g0586400

Genome Context

<gbrowseImage1> name=NC_008398:29295140..29301179 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:29295140..29301179 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggagcgaggcgaaggagatgaagtacaggagaagggctagggttccagagcccttcgattacgggcaatgcggcggcgaccggagtggcgtgctggattggggcgcgctcaaggagaaccccgtggagctgctccggaagctcgacgagctgcgggaccacatcaccaggtcctgcgagatcaccgaccagccgcgggagcgccaccgcatgagccgccgcacggcctcgctgcgcccctcgcacgccgagccgccgccgctaggccgtgggccggagcactaccgctcacgctacacgggaaggtacgggtctggctttccgcacagtccgaatgaccagctgcatcggtctatgcatagagataggtatgagaggcagccgagtgggcggttccggcaatggccggagaggcagtgggagaattctgggtatcttggggggaatcaccatcagagcacctgccagtgtgcacagtgccttcatggccagagagctgtgatgcaggaggagcacattcccatgacgaggtactttgcaggccagcaggggtctcacctgttcgataggtccccatcagtctcatcggagcttgaccggaggtctgtcgcttcgtcattgtactctcatttctcggtgtcgaagaggaggacagagtttttcaggaagaaggcagagagtttctgtcgtcctgtgagaggcgccgctcctttcgttgtatgcagttcttgtaaccagctgctgcagctgcctcctgggaaatgcacagctcggaagcagattcaagttcggtgtggttcgtgctcggagatcgttagtttcaagcttaaggaagtgaaaattcatcctttggttgcgccgacatctttccctgcatcaaaaacagtggggagttccagtcgtcaggttaacaaaagttttgggtggtaccaacatcaggatgaaggaaattctagtttccataagctgcaagcacaagagagatggcagcagaacaaggatcttgcagacaatatttctgtgtcttctacttctagttatgacagaatagacaaagagtgtggatcaaacaggagcagtcagttactatcagtatctgttagaaggtccagacttgcaaatatcccaaaggatatactatgtcaaggagatgcatacagtcaagtagaaacttcagcatttaatacaggcaatctacaggccccagttatagaggacaaatgtgtcgatccattttccagtcgtctaaaagattgtagtggtggagatcgcacaagcaaggaatgtagcctaaatatcatggcagattctgttgatgctaatgttagggatgaaagatcggacgtgacatatgagcagaacagcaaagatcataaagaaggatttggagaagaaactgtcagcagtagacatgagcaaaagctcaaagaaagtacaagtggcttttgtgatgatggaagcatgggtaacatagacaagctgacggctgataatgatgataccagcagccttgaagatggagacgtgagcaaaaagtatgaagaaaaaatcaaacaagatgacaacaactttcaatcagaattcattactgagcgatatagcaaatgcagcaaagaagataataacagtgtcattcaagttgaaactatagctacgatatgcaaacaagatgacttagatgattgttatagtgaattgctctccccaaattctgaacatgccataatgccatcgaagcttgagtcatcagttaatgagcgcacaaattctagttctcgtgtttcttctgaggctgaactagacgaagttcagtctgcagctactaagaacggggattcaaagttttttgctggttttttgaagaaaggtttgaaggacatttctttgttcaatcaatcagtggacagtgctaaggtttcaatcaatggccattcaatctccgaacgtgtcctacggaaggccgagaagaagtctggtccagttggccctggttcatattggtatgactaccgcgctggattttggggtgtcatgggacatgagtgtagtggcatcatccctccatttataaaggaatttaattatccaatgccgaaaaattgtgccggtgggaacacaggagttattgtcaatggtagagaacttcatcagaaagactttgaattgcttgcaggaagaggtctcccacggatatctggaaaatcatattctgttgagatcaatggaaatgtgattgatgaaacaactggcaaaaaattacgaaagcttggaaagcttgctcctacagttgagaagttaaaacgtggatttggcatgcacgtccctgaagagaaaagttag</cdnaseq>

Protein Sequence

<aaseq>MGSEAKEMKYRRRARVPEPFDYGQCGGDRSGVLDWGALKENPVE LLRKLDELRDHITRSCEITDQPRERHRMSRRTASLRPSHAEPPPLGRGPEHYRSRYTG RYGSGFPHSPNDQLHRSMHRDRYERQPSGRFRQWPERQWENSGYLGGNHHQSTCQCAQ CLHGQRAVMQEEHIPMTRYFAGQQGSHLFDRSPSVSSELDRRSVASSLYSHFSVSKRR TEFFRKKAESFCRPVRGAAPFVVCSSCNQLLQLPPGKCTARKQIQVRCGSCSEIVSFK LKEVKIHPLVAPTSFPASKTVGSSSRQVNKSFGWYQHQDEGNSSFHKLQAQERWQQNK DLADNISVSSTSSYDRIDKECGSNRSSQLLSVSVRRSRLANIPKDILCQGDAYSQVET SAFNTGNLQAPVIEDKCVDPFSSRLKDCSGGDRTSKECSLNIMADSVDANVRDERSDV TYEQNSKDHKEGFGEETVSSRHEQKLKESTSGFCDDGSMGNIDKLTADNDDTSSLEDG DVSKKYEEKIKQDDNNFQSEFITERYSKCSKEDNNSVIQVETIATICKQDDLDDCYSE LLSPNSEHAIMPSKLESSVNERTNSSSRVSSEAELDEVQSAATKNGDSKFFAGFLKKG LKDISLFNQSVDSAKVSINGHSISERVLRKAEKKSGPVGPGSYWYDYRAGFWGVMGHE CSGIIPPFIKEFNYPMPKNCAGGNTGVIVNGRELHQKDFELLAGRGLPRISGKSYSVE INGNVIDETTGKKLRKLGKLAPTVEKLKRGFGMHVPEEKS</aaseq>

Gene Sequence

<dnaseqindica>381..2383#3230..3290#3369..3592#5466..5520#gtcttcttcctctcgccgccgcagcgcgcggccgccactccatccaccacaatggcgaaccccacgtcccaccgcctcctcctcgccgcgtagccctatcggcgagccgctgccggtggcttctccgcatccccgcgccgtagagtctccgccgccgccgtgtgctccgcaacattggggtcgaggtaaccgccaccgccgcctcctccgcttctccgtagcattcagaagcttcgctgctctgatctacattggcgtcttcccatttcgtgtttggtggctacgaatttcgagcgactcattggaagttttccccgcagggttttcgattcggcgaaggggggggggggggggggaaagctcgtcccgtgggaggcgccatggggagcgaggcgaaggagatgaagtacaggagaagggctagggttccagagcccttcgattacgggcaatgcggcggcgaccggagtggcgtgctggattggggcgcgctcaaggagaaccccgtggagctgctccggaagctcgacgagctgcgggaccacatcaccaggtcctgcgagatcaccgaccagccgcgggagcgccaccgcatgagccgccgcacggcctcgctgcgcccctcgcacgccgagccgccgccgctaggccgtgggccggagcactaccgctcacgctacacgggaaggtacgggtctggctttccgcacagtccgaatgaccagctgcatcggtctatgcatagagataggtatgagaggcagccgagtgggcggttccggcaatggccggagaggcagtgggagaattctgggtatcttggggggaatcaccatcagagcacctgccagtgtgcacagtgccttcatggccagagagctgtgatgcaggaggagcacattcccatgacgaggtactttgcaggccagcaggggtctcacctgttcgataggtccccatcagtctcatcggagcttgaccggaggtctgtcgcttcgtcattgtactctcatttctcggtgtcgaagaggaggacagagtttttcaggaagaaggcagagagtttctgtcgtcctgtgagaggcgccgctcctttcgttgtatgcagttcttgtaaccagctgctgcagctgcctcctgggaaatgcacagctcggaagcagattcaagttcggtgtggttcgtgctcggagatcgttagtttcaagcttaaggaagtgaaaattcatcctttggttgcgccgacatctttccctgcatcaaaaacagtggggagttccagtcgtcaggttaacaaaagttttgggtggtaccaacatcaggatgaaggaaattctagtttccataagctgcaagcacaagagagatggcagcagaacaaggatcttgcagacaatatttctgtgtcttctacttctagttatgacagaatagacaaagagtgtggatcaaacaggagcagtcagttactatcagtatctgttagaaggtccagacttgcaaatatcccaaaggatatactatgtcaaggagatgcatacagtcaagtagaaacttcagcatttaatacaggcaatctacaggccccagttatagaggacaaatgtgtcgatccattttccagtcgtctaaaagattgtagtggtggagatcgcacaagcaaggaatgtagcctaaatatcatggcagattctgttgatgctaatgttagggatgaaagatcggacgtgacatatgagcagaacagcaaagatcataaagaaggatttggagaagaaactgtcagcagtagacatgagcaaaagctcaaagaaagtacaagtggcttttgtgatgatggaagcatgggtaacatagacaagctgacggctgataatgatgataccagcagccttgaagatggagacgtgagcaaaaagtatgaagaaaaaatcaaacaagatgacaacaactttcaatcagaattcattactgagcgatatagcaaatgcagcaaagaagataataacagtgtcattcaagttgaaactatagctacgatatgcaaacaagatgacttagatgattgttatagtgaattgctctccccaaattctgaacatgccataatgccatcgaagcttgagtcatcagttaatgagcgcacaaattctagttctcgtgtttcttctgaggctgaactagacgaagttcagtctgcagctactaagaacggggattcaaagttttttgctggttttttgaagaaaggtttgaaggacatttctttgttcaatcaatcagtggacagtgctaaggtttcaatcaatggccattcaatctccgaacgtgtcctacggaaggccgagaagaagtctggtccagttggccctggttcatattggtaagtcaccttctcccttcataaatttggaaattgttatggactgatgttcttagcgtttgatatctaccgtgttggcacttgtcattgttttctttagcatctttttatcatttgcctttgaaatcaagagacgcacaactacaggcaaaagagattggtgttattcttcagaagaatctatcttaacagtaggaattaagatgacttatactgcacagcggtgattaaatgactgtgtaattctcaattgcatattaaccaacctatgtacctgatttccttgataacttttctcagccaaatcaaccacttccctgagttgattactagaacattttgtacagtgatgagatacctggaagattcttgtcctgcagagttttttttttttttttggctgttgattgctcccattaaatgctagtagctcaaaaaatttcttgcatggcctagttcatgtattaacatctgttaatttattatcacggtcttactttgtctcggcattcagtaactatgtgcaacattagttttgttctgttattgttaatcgtaatggtacagtgtgaactataatttattttcacacatctgcatgcttgcgacatgcaagctccataattcaatggtctgccttttaccagctacagttttaaaattaatctgattagtatacaaagacgaggaaaatgcaaagttagtacagtaaaaattactctgggaatatcatctacctaatgtactttccaaagcaactttgttggatcttcaccaacttaaattcacaaggcattgggaatttccgtgtaaggtaacattccgtattctctaattgtgattcaggtatgactaccgcgctggattttggggtgtcatgggacatgagtgtagtggcatcatccctgtaagatgattatttttctcgtagttctttctctagaactttgtggtagcacgtcatgacagagctttgtttttgcagccatttataaaggaatttaattatccaatgccgaaaaattgtgccggtgggaacacaggagttattgtcaatggtagagaacttcatcagaaagactttgaattgcttgcaggaagaggtctcccacggatatctggaaaatcatattctgttgagatcaatggaaatgtgattgatgaaacaactggcaaaaaattacgaaagcttggaaagcttgctcctacgtaagtttcttcttcagctcagttcgaacaacaccatgtgaaatagcatttccagtattttgtggtcacgtagtgtccattcatttcttgcacaatattttcaccttttggcctccttacactagtcattttaaagaacaacctaatgaacagagtctgactaattattgaagttgggagttgagtgtgtgatccaacaagaatagaagagccaggagaaggttcagatcatggcttaagatgtattaaattggtaaggcattgaacacatgccaaactggtgaaacaactctgtacaacataaccaataagagaagaaaagcccgagcttactaactgaaaaaagcatgagaaaaatgcaaaattttaaataaataaagatgttgtgccaggggacagaagatctaggctggacaggatctagcagcaatatctttcaagttaaacaaccctagtcaaatagctctagtgtagtcacaggttcacagcatcttctgacaaagctaaagacaaccagatctttatgttgccagattaacaaaaaaaaaaatcaggcatcaacaaacatgaataccaggcaattcagtcaattgcagtggtgttttcatgttgcacctgttgttcttgtgtcccacgttttgaaatcatggcctccaatgcaccgtatcatctatgccaaagaattagttaatttgttgttgaataggagtatatcatttcaaagtaaggcctggtttagttctcaactttttcttcaaacttccaacttttccatcacatcaaaacttccctacacacataaacttccaacttttccgtcacattgttccaatttcaatcaaacttccaattttggcgtgaactaaacacaccctaaatataaaaacccaataacaagcagccaacgactgtacatgattttttttcccttttcacctcaactctaatcacagaatacgaaaagtcctctgtagtctctgcctctctggacatctaggccaagctaatgcatctcacataacaggccagaggaaatttaggggttgtttggattagtccctgtcacattggatatttgacactaattagaagtattaaacgtagactattgacaaaaaccattccataaccctggactaattcgcgagacgactctattgaacctaattaatccatgattatagcctatgtgatgctacagtaaacatgtgctaattatggattaattagacttaaaaaatttatcacacgaattagttctcatttatgtaattagttttgtaaatagtctatgtttaatactccaaattaatgtccaaacatccgatttgacagggactaaagtttagtctttggatccaaacaccaccttagctatagaacactagagcatgacatgatcaatactttcagcttgcgtgcatagtagttacaactcttccaacctgtctggtcttatttctttaattagatttccggttttgtttgtactaactagattggtcgttatgtcctatccaagcttcattgtccacaatttacgggcatcggatcttttgccctccaaagaatagagcgctctatgcataaccttgtcttttagctattttcatcttgctgtggttgtttcagtattttcattgtttgtagtctattgtatacgtagaagtaaatcatcagatgatattgtgcaagctcatcatatcgttcctttggatgaaattacgagagttttgtgttactagtttcttctattcataatgattactcccgtgtcaacgcttagactcagtaacataaattttatcagcaactacgttttgatcagatttcttaaaaccaggcactaacaatttcaaattttaatgatcagagttgagaagttaaaacgtggatttggcatgcacgtccctgaagagaaaagttagctctctggctctgatgatgttcccttgctttgcaaaaactcatttccacgtaaaagctgtcaagggagttaaattggattgtggcatggaagaagcctttagattgtacttcttgaagcttgagtgtgcagcaacagtaatacacgagtacctaagacgacctgttttttatatatatttaccacttactcattcaaagttgacaaattgtcgtacaaattccattacttcatttgaagcattctttaggtatatatgacctaagcatgcgaacagctctaagttcctcatgtgtctgggtatgttgtttcctgtcccctgcatatgttgttgatacagagcaatagagtatagacaatattctgggtgtgtatcgttgtgggcttgtaatatgtctgctataccagtgcctttttacattatattacacatgtatgtaaagttgtaaatatttaatcttaaccaccttttgctaggtggcagatgtgaatgtttgatgatttgggcttgaggtttcatt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0586400, RefSeq:Os05g0586400