Os05g0588100

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Revision as of 10:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0588100| Description = Phospholipase/Carboxylesterase family protein| Version = NM_001187618.1 GI:297724366 GeneID:9269686| Length = 4945 b...")
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Gene Name

Os05g0588100

Description

Phospholipase/Carboxylesterase family protein

Version

NM_001187618.1 GI:297724366 GeneID:9269686

Length

4945 bp

Definition

Oryza sativa Japonica Group Os05g0588100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29375405..29380349

Sequence Coding Region

29378630..29378791

Expression

GEO Profiles:Os05g0588100

Genome Context

<gbrowseImage1> name=NC_008398:29375405..29380349 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:29375405..29380349 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ctgcaaaagaacaattctgagcacgatttaaatggtgattcaggtggacggggtggtcagagagttgagtacgggaggacctatgtggtgaggccaaagggaaggcaccaagccaccattgtgtggcttcatggcctaggtgacaatggtgcaaggtactag</cdnaseq>

Protein Sequence

<aaseq>LQKNNSEHDLNGDSGGRGGQRVEYGRTYVVRPKGRHQATIVWLH GLGDNGARY</aaseq>

Gene Sequence

<dnaseqindica>1559..1720#ggtcagtttttatttgacttttggttcatctttaatctttattgttgagggtggatcaactcagctccatttctgaggcatattggtaaagttgtccacctttcttggcaagcaaatctagggtaagataaagctagctcatcaaaggtaaaaaaaaaggctgtagttgtcctatttatttagtaacattcgcatagtcaacagtgtaaacaggataaatttcactagaattattgcatcaaggttgagacaatttccagtctaaaagaaaattaaaacttgtgttgcataaagtcaacaacagctaaatgttatggcaaactactgtctagtttgatatgaccctttaactaattgaatggctacagttaacagttgacgtaattgtagcaacaatatgtcatgtttctgttgcaagcatctgtaccttcatgaagattgcaccacgtttatgaggcaatctgcaagtgtaattgcacttgtgtctgatttggttcccatatccatgttgatttggtgtcgacacttgatagatatttctaccaatgtaatcatcctttctggactcttcactatatcttgatggtatgccaaaacaagttgtggcatacaattccttttgctttgctttctcctaaaattaatgcaaggcgcacagttcttttgcacattccaggaaaaaaaaattctttctgctttgtcatctgcataaaaaaacttgaaataccaaaatcagaatttgtactccgtctttttgaaattgtacttccagcaagaacatctgaagttccatctagcagtaactggtaagtatgatgtgaaaagaaagctcaatgactggacaatttgttccgttatgcttattccttgccattttatttaaagttttcccatatggagttgcaacaatttgtgggcagaatgcagtgggcattagtactccatcctacaagcggatatatgcttggcagacaaaaaataagggaaaaaagggacatgaaacagcatttatgtattatatggttcctccttggccttagtttgcttgcatgatatgtttaggcatcactttcatcgtcaccgtcactgtcactgtgtgtgtatctctgtgtgcaaggctgtaagcattgtacaggattcttcactctagagcaaagggcttcaatcttttttaccctaccatcccttgagtattccagactccagatgctcctcctatgacagctttgctgcggaaaaccgcactgtcctgagatgcagattcaaaggagtgtccaacacacacacacacacacatataatattccctcttcagataaccttcactataaatacatgccaactggggctgtgctcttcatacccttccatacgttcggacgttcagtgcacatcatacagaaatagtagtatagtactatagctgagtagcatcagtacagacttgctgcagaaaacatcatgagttactatggaagcagttcttctggtaatctgtctactccattatacatttttttctcgaaaacttatttgcccattataataatctatatagctgcaaaagaacaattctgagcacgatttaaatggtgattcaggtggacggggtggtcagagagttgagtacgggaggacctatgtggtgaggccaaagggaaggcaccaagccaccattgtgtggcttcatggcctaggtgacaatggtgcaaggtactagctgtatgctgctggtttgatatagatttgcctgttccacaaacttttcttgcttactcagatgctcccctttcaagcaatactatcttcttcaaatttaatagaagtgcaaatacactacacttttcaaccaatggtttatggtttatgggactagatcatggcaatgtagatgcaacgctttaatcagtccctttgcatctttctgccagaaatgactgaagtgttgtcctttctgtgtccgtgcatgcatatattcctagtattgctttactcaaaagtactacctccgtcccaaaataagtgcagccgtggatatccgtgcccaacatttgaccgtccgtcttatttaaaaatatttagtcacacataaagtactattcatgttttatcatctaatagcaagtaaaatactaatcataaaaaattttcaaataagacgaacggtgaaacgttgaacgtgaatagtgcaaaactgcacttattttgggacggagggagtaaatgtttctcttgtccttctgcacacctgacaaccttctgcgccaccaaggacatagataatgcatctcactttccattcagaaatggagaggaatgtcaaatacttctaattgatgtgggctaatggcatattaaaattgcataaatgtaaggtagcttatgaaagattcctaatttcctattccatgtctgcacaaagcatctaaagaacagcataatttatgataagccactaaattagagtatcttggctccattaaatagagtttttaatggccagtatcaactccgggagcaaagaaggtaaaaagtaagcttggccgcctttcagtttggtatgatgcatgtgtcacaatttcttttaagagttcagtacacatttgccaagttaagctctgcggcagatgttcatttcctgttctttttcattcatttccctattgtctccagtaactaaaaagatcagcaactcagctacttacatgttacgttttttgttgataagataattgtttattctcttaagataagctaagaaattcaggctagttgctcaacttgctgtaaaaattctgtccagtactgtaaatgttctctctttagtctgatctgatggattccaatttgtagttccagatgttcttatatcttcactgatacttttagacgacgcctgttgtttatacatatatgatgtgttaatcataagttctcagagaatatgaaacagaatacctatactagttgcatccacaatgcttttctgcactgatccgtttccttttctctgttttgttcattctgttttcagctggtcccaactcctggattctctttcattgccaaatgtaagtgtcgatgcttgtacttcagacacacatacacagatgatagatacatacacacaccgttccttattcccctattaacacacaccggtctctctccaccggtctatctccagatcagtgtagcttatcatgttcagtagcaactagcagtctatttttgttgcaccatggtttattcaccttgaagcttatgatggtgtagatcaagtggatttgccccaccgcagcaacccagcctgtcacagcatttggtggattcccttgcactgcatgtaagcttcttcttctccattggaacttggcagaataccctgtattcaggactactatgctaccatctctctgaagtttgaaaacttaggggtactgccatttctctctgacttattagcttttgtatggaactgaaatagggtttgatgtggaggatacttcagtggatggccgtgacgacattgaaggactggatgcttcagctgcgcacattgcaaacttgctgtcgtcagagccgcctgatggtactagttccaggaccacatcaatgtaacatatattatggtcttaccagattctttttcttttaatttttcaaagtgatccttattagtggcaccggtaaatgcatatgttaattaggtgatcaaatgcgagccagtatatatacaaaactagcactaactatgatatgttcttcagatgtatgctggtgaccactcactcctgtgacactcattccactgatttccacactttgcgagtgcagtgaagcttgggattggtggtttcagcatgggtgctgctgcttccctctactcagctgcgtgctatgctcatggcaaattcgcaagtggcatcccctacccaatcacacttagcgcggtcatcagcttgagtggatggctcccttgctccaggtgccagtttgccatcctaggcagaaattaatctgtcaaacacttgctacttactagtgtcacttgttcctgaatcctagtgttgctaatgcactgtaattttaggaccctgaggggcaagatggagagctcacacatagctgcaagaagagctgcctccttgcctatcttacttagccatggaagaggtaacaaagctgtcgattcatgtagccttccctccagaaacagtataactagtcattaccagtcaatgcatcatgcgtcagtctgttctcaattctgtgtgttgttgcagcggatgaggttgtatcctacaggaatgctgagaggtcatctgacactctgcgatcctcggggttcttatatctgcatttcaaatcctacaatgggtacatattcatgcatttgcacagcagagtacaaaacagaattcttttagcaaagattgacaaagtttcttatgatgcaggctaggccactataccatccctgaagagatggacgacgttggcaagtggctcagctcaaggcttggcctcgacagatcccgctaaggactagttcggttaatcccactcacaaggggattgaggagaatttggagatgaataatttcacacctattgaggtgtggaattaatccccctcaatctctcccatacggggattaaccgaataaagctttatggaagtaaacttgtgcactacacagtcgcaacagtacgtggaatggaatggtgttaactatgtggaggccaaggcttgattgtgctctgttacttattaaggattttgagcatatgtcaccaagtgccaataatgcagttgaggctcctttccttgcaatcatttttgtttgtctgttttttttttctaaagaaggcaaggcagctgccttgtatattatgtacaagtgtccttgcaatcatgtttatatatatattcttacatact</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0588100, RefSeq:Os05g0588100