Os05g0588200

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Revision as of 10:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0588200| Description = RuvA domain 2-like containing protein| Version = NM_001063008.1 GI:115465746 GeneID:4339770| Length = 3340 bp| Defi...")
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Gene Name

Os05g0588200

Description

RuvA domain 2-like containing protein

Version

NM_001063008.1 GI:115465746 GeneID:4339770

Length

3340 bp

Definition

Oryza sativa Japonica Group Os05g0588200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29382508..29385847

Sequence Coding Region

29383468..29383617,29384088..29384171,29384259..29384299,29384391..29384485,29384560..29384655
,29384726..29384814,29384893..29385014,29385654..29385723

Expression

GEO Profiles:Os05g0588200

Genome Context

<gbrowseImage1> name=NC_008398:29382508..29385847 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:29382508..29385847 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcgctccacccactccaccggctggacctgcctcccaccgccgccgcccgaacccgctgctccaggtcgtggagtatgcgcaatgagcacttcatggagggataaacaacagccaagcctcatcaactttattgctgcattcttagctgcaaactcataccgcctaaacttcctgtcaatatctcctgactttatattcaacaatggggagctatctgttgcatttatctttgagacaaactgggattgtcaaaatgaaggtgctgtctttagcagggtgaatatgctgaagaggcagttaaaacatctatatgttgttgttgctgttcctacaaaagagcaaaacgaatcatttaatcgatcatatcacaagtatggtatgaagcttggctttcctacgtttgtgcctgttactgatccggagatggggttcgagaaaatcgtgaagatagctcatgcacttggagtatgcaagcagcaagacattatctcaagactgaagaatgagcgggagcaagcagttcagtgcactgattcctttctacgtgtgctcacctctattcctggtattgacaatcatgacgccaatgcgcttgcccaagctattgggtctattgaagcaattgcaaaagcatccaagaaatttattctagaaaacactgacctttccacggataaggcagagacaattgtcaggttcttcagagatccgcagtactacttaagccctaaaattaactag</cdnaseq>

Protein Sequence

<aaseq>MERSTHSTGWTCLPPPPPEPAAPGRGVCAMSTSWRDKQQPSLIN FIAAFLAANSYRLNFLSISPDFIFNNGELSVAFIFETNWDCQNEGAVFSRVNMLKRQL KHLYVVVAVPTKEQNESFNRSYHKYGMKLGFPTFVPVTDPEMGFEKIVKIAHALGVCK QQDIISRLKNEREQAVQCTDSFLRVLTSIPGIDNHDANALAQAIGSIEAIAKASKKFI LENTDLSTDKAETIVRFFRDPQYYLSPKIN</aaseq>

Gene Sequence

<dnaseqindica>2231..2380#1677..1760#1549..1589#1363..1457#1193..1288#1034..1122#834..955#125..194#gcgagcaaaagccgccgcgaaaccgcactagccgagtcgacggcaaaccggcggcgagttggctggctcttccgctcgatccccgtcgcggcgccgcctcgtctcgccgtcctcctccgatccgatggagcgctccacccactccaccggctggacctgcctcccaccgccgccgcccgaacccgctgctccaggtcatccactccctcgcctctcgctctctctctctccccctctcacgcacgcgctagggcatcgccccatactggatcaatcaagcccgcaatgtcgcaaaatcatgagttcagtacggtacgagttacatttctcaatcctactagttctaggaatggctgcctctctggaagcatcaggctagtgctgcttgtggatatgttttacttgcttatatggcatgggcgcgtggccatgttcatctcctacttaaggagctaaggccgtcactttgcagtgttcacctgttcaatttcggcatttcttacttctagttctaggaatggctgcttgtttccggaagcaccagcctgttgctacttgtggacacgtcttacttgctaatggcatgttcatgttcatgtcctatttcatttaaaccaatcagtctgcagtactctgctgttcaatttcagtatgttaggactcaggagcacttagaaattcagtttgcactctagaattctttcatatggaatctccaatgttagaccagtacaggaagcctgaagcaaagaagcagcaggctgcttttagcttatcctacactgagcacatttttggttactctatttggggttttgggcaccgtcctgcaggtcgtggagtatgcgcaatgagcacttcatggagggataaacaacagccaagcctcatcaactttattgctgcattcttagctgcaaactcataccgcctaaacttcctgtcaatatctcctgtaagcacctcttcctgcttcaacgtcacacaactgtttctgtggcgcctttctgtaacctgagcaagtgtttcccaggactttatattcaacaatggggagctatctgttgcatttatctttgagacaaactgggattgtcaaaatgaaggtgctgtctttagcaggtgcgagactcctattccaatccaccctaacgactatgataatgacttcagtttcgatatgccttttcagggtgaatatgctgaagaggcagttaaaacatctatatgttgttgttgctgttcctacaaaagagcaaaacgaatcatttaatcgatcatatcacaagtatgcacctatcataatgttaatgccagaatattttagttgagctattgattttcatgtatttcttattcaaggtatggtatgaagcttggctttcctacgtttgtgcctgttactgatccggagatggggttcgagaaaatcgtgaagatagctcatgcacttggaggtaaatctcaaacttcatttagcaattctctcagtcctattcaaattctgaattgtaagctgacattgatcgacactcctttcttattcagtatgcaagcagcaagacattatctcaagactgaagaatgaggtgctttcacatgtttccagatacacagtgctctatttcttggtctataattgaaatggagcctaatgatttcctgcttgtctgtagcgggagcaagcagttcagtgcactgattcctttctacgtgtgctcacctctattcctggtattgacaatcatgacgccaatgcggtatgcactcaattattttagccttatgtatgaccagatggtcttttgcttgcttgcataaaaatgttaattataagtccgcatacttaattgatagttctttctttagggaaaatgtattagagacattgtttgcatatataagtaccatctttgtgtactcattctactaaatcgttctaaaggataagcttagcattactccacagctaattcagggtataactgagcttaaacacagttattggaccttctccatgcaaagtgctgaccttttggaacttttcatgatgagaattgatcgttttctattcctgatatatttatgtactaatctgttagcatttattccttttctcctatagcctacccagtagatatatatggtcaatcctcatgcttaacatgagataacattttactgttcatataatgccatgctgatattgatgtcacacttgattttcaagcttgcccaagctattgggtctattgaagcaattgcaaaagcatccaagaaatttattctagaaaacactgacctttccacggataaggcagagacaattgtcaggttcttcagagatccgcagtactacttaagccctaaaattaactagttacaggtatgttccacctgcttgacttaagtagttcaattgatttactttagttactattttaacaccttcatttttttctgataaaataaaactgtcaatgtatcacttctctttattgctgtgtgaattgtttttggggcaagtacagaaactgattcatggtgatagactgatagtgtatatccacctcgaaacttcttcaattttacttatatgttatattttcatttgttttgtgatgtaaattcctacggtctggctcacaccgtaccacatttaccagaggaaagtcacatgcacaactgagggaagattatatgattcagtttgttcaattgtgtgttttggagtgttccctttcaataatataagaatcttatgatttgcatgcttaattggcatgtttagatataggtgggctttatagttgaaagtcaggaaaagaggtaacattgttatgactaaatcctaagtagtcttcagtggtggatatcatcagcctttcacttgcaagctcataaagaaatacattgtagttcttgttagctgaacactttccttttcccttggatactagggcttaatgtctcgatgctgcctccatgtattcttgtttgtcagttttacaattccatgtactgagatcgtttcttgatttggcaggcagaaggtgattgtgaacctgagctatggactgaatcaactgggcggactgactgcctgcggaagcctgtgcacagcttctttatccttgtggttgctatattgttacgtagtatttttagaccattaatactctgtgtcagagagaatcctgatgcttctgcttagttgtgagttgcgactcctcaaaggctcctgattgcgttgggtcagcaggcagtcttttgatcttaactagatggaaaaagagaaacaaagtctacttatatagcaatcactgttaaatgtcctgct</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0588200, RefSeq:Os05g0588200