Os05g0592300

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Revision as of 10:37, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0592300| Description = Protein of unknown function DUF1637 family protein| Version = NM_001063029.1 GI:115465788 GeneID:4339793| Length = 2...")
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Gene Name

Os05g0592300

Description

Protein of unknown function DUF1637 family protein

Version

NM_001063029.1 GI:115465788 GeneID:4339793

Length

2966 bp

Definition

Oryza sativa Japonica Group Os05g0592300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29588587..29591552

Sequence Coding Region

29588875..29589121,29590129..29590247,29590332..29590494,29590602..29590808,29590952..29591040

Expression

GEO Profiles:Os05g0592300

Genome Context

<gbrowseImage1> name=NC_008398:29588587..29591552 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:29588587..29591552 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcccgtgcagctgggaggagggggcaaggtggcggaacccaaggacctcgccgccaccgacaaggaccgcccctcctccaagaagaaccgccgccgccaaaagaagcccgcaacttccgccgccatctccccgccggtcgccgccatgcagaccctcttcgacaccagcagggaggtcttccaggattctttgccgggattcgtgccgccgccccaagccgtcgcccgactcgccgccctactcaatgatttgaaaccacatgatgttggaattgagccgagtatgtcgtgtttcaagaatgccgattctaaagggcctcctcgggtgacttatctacatttttacgattgccccaagttttcgtttggtatcttctgtttaccgaagtcagctgtcattcccctccacaatcatcctgggatgacagtattctgcaagatactgtttggctccatgcacctcaagtcctatgactgggctaaaagtgccccagataatgataataatgcacttgagacctcagatggagctcgtttagcaaaggtaaatacagatgcggtttttgatgcttcatcggagaccacagttctataccctgaaaatggagggaatttgcactgttttactgcaaggacagcttgtgctgtgcttgacgtgatgggacccccgtacaaccgcgcggatggaagggattgctcatattacgacgaatccccatacttgagttcatctggtggagatgcacggtactcgtggctcaaagaaaatcatagtacgttcgagatgaaaggtgtacagatgccacaaaggtttatcgtttag</cdnaseq>

Protein Sequence

<aaseq>MPVQLGGGGKVAEPKDLAATDKDRPSSKKNRRRQKKPATSAAIS PPVAAMQTLFDTSREVFQDSLPGFVPPPQAVARLAALLNDLKPHDVGIEPSMSCFKNA DSKGPPRVTYLHFYDCPKFSFGIFCLPKSAVIPLHNHPGMTVFCKILFGSMHLKSYDW AKSAPDNDNNALETSDGARLAKVNTDAVFDASSETTVLYPENGGNLHCFTARTACAVL DVMGPPYNRADGRDCSYYDESPYLSSSGGDARYSWLKENHSTFEMKGVQMPQRFIV</aaseq>

Gene Sequence

<dnaseqindica>289..535#1543..1661#1746..1908#2016..2222#2366..2454#gcgtggcgtcctcttccctccagtccccgcccccggttttgccttcctcccctcctgcctgggtttggtttggtttggctttgcttcttcctcgcgcggcgcctcccatccgcatggatgatgccttctccttctccttctccttctccttctccttcttgatatttccatttcctccccattgttccctccttctgcctcctccctcctcaaatctacacctatccccaccaccgccctagcttcttctcctctcccgcagccgcccgcaagatcgatctgtcactcatgcccgtgcagctgggaggagggggcaaggtggcggaacccaaggacctcgccgccaccgacaaggaccgcccctcctccaagaagaaccgccgccgccaaaagaagcccgcaacttccgccgccatctccccgccggtcgccgccatgcagaccctcttcgacaccagcagggaggtcttccaggattctttgccgggattcgtgccgccgccccaagccgtcgcccgactcgccgccctactcagtacctactttactccttcctatatcctactactactactccgtgctctctctacatgcatgcctttgttttcactctctactgtaccagcaacgatgcccctgatttttgctaactggagacagtacacaagacaagttgctgatgttgttggcggaattatactttgattctttgcacttaatctccgaaagaaacatctacatgtttctcgtgcttatgcttaggttgtacgatcgacaacgataggctgtatcgcctgatccaagctcacacaaccaacaacctccctgctttactcctccatccctgttcctttcctctcctgacaaggtccatttttggtatggaccatcctttgctattcttgtatgtttgccctgccatggtggcctttgcatctgtacgcccacctctctgccacatactactgaatatttcctacagccagccacaggtatatgtcaacttcactcgacaggtgctgcgtgtctggccgtattcagtgttaatactaggaattggaattttgatcttgccagttcacgtttatctcttcacttcctactgatgtgtgaaaccacctaaagtttgttacaaacattgttcttgtcatggggcctgggcccaacttaaatcattgctcagttttgccaatctggttatacaagctttcttcttcttcttcttcttttttccatcatgtgatagtagtgatactatgcaaagacatgatgaagaaattgctacaagctggttcttaacattgtgtttcttctaaatcttccaagtatttgatatttctgcaattgactccttaatgttcaaactaaactagtaggtcgttcttttttgtttgttagactacttcagtaattattatttttgactcagccttgcacttttgaacatttcttgcatgtgcacttgtctatatgcaaatacctgtgattcttaacccagatcctgacatccattttgtcccatctccttccttttggatgcagatgatttgaaaccacatgatgttggaattgagccgagtatgtcgtgtttcaagaatgccgattctaaagggcctcctcgggtgacttatctacatttttacgattgccccaagttttcggtaatctgaccttgcatactttttccacgtaaataactttttgaaagaaaaagtttttactgatgctttgtatgttttgtgcagtttggtatcttctgtttaccgaagtcagctgtcattcccctccacaatcatcctgggatgacagtattctgcaagatactgtttggctccatgcacctcaagtcctatgactgggctaaaagtgccccagataatgataataatgcacttgagacctcagatggttagttggtacatttatgttcttatccttttcagcaacagactctgttttagggaaatttattgcccacgcttcattttctgatatcctttttgtcctaaccacaggagctcgtttagcaaaggtaaatacagatgcggtttttgatgcttcatcggagaccacagttctataccctgaaaatggagggaatttgcactgttttactgcaaggacagcttgtgctgtgcttgacgtgatgggacccccgtacaaccgcgcggatggaagggattgctcatattacgacgaatccccatacttgagttcatctggtgagttgttgactatccatccatctgcatctttattctttcgtatatatttaatgcaaaggggtgtgtcgacttgaaacaaaataaattatctgtggatccttttagttctactagctgagagaaatggcatttgatttcaggtggagatgcacggtactcgtggctcaaagaaaatcatagtacgttcgagatgaaaggtgtacagatgccacaaaggtttatcgtttagaaatgacatacagcatcattttgtggcaacacctgcaaccatttccgccgaagaatggtcctcctctagcttgctgtagatacctgtaactgcaaagacaggcagatggtacaagggaagatgtggccactaagctcagactagcaaactcttgagtgacacagacgttacatttgtttggcttcttattttggtcagggttgaaacaatctcttgtgattttcagataactctgttcctcatatgttatcctcgtctggcagtgcaaaattgggattgggtgatacagtgaacaagtgttttgtttttgggccatgatcatctttttttgtttccctgtagaactgtatgcaggcgttttttgaaagtgatcatgtaccgaattcagagtgtggtttgcttggtttgttgaacagggaagctattcctttttgcctcttactgtagtagacaagaggcatatacatacataacatagcctttgtttcttgagcaaagaaatttgtgtcacc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0592300, RefSeq:Os05g0592300